GO Enrichment Analysis of Co-expressed Genes with
AT4G31810
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000478: endonucleolytic cleavage involved in rRNA processing | 0.00E+00 |
| 2 | GO:0019307: mannose biosynthetic process | 0.00E+00 |
| 3 | GO:0072321: chaperone-mediated protein transport | 0.00E+00 |
| 4 | GO:0071433: cell wall repair | 0.00E+00 |
| 5 | GO:0000494: box C/D snoRNA 3'-end processing | 0.00E+00 |
| 6 | GO:0080056: petal vascular tissue pattern formation | 0.00E+00 |
| 7 | GO:0045047: protein targeting to ER | 0.00E+00 |
| 8 | GO:0071731: response to nitric oxide | 0.00E+00 |
| 9 | GO:0039694: viral RNA genome replication | 0.00E+00 |
| 10 | GO:0031564: transcription antitermination | 0.00E+00 |
| 11 | GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 0.00E+00 |
| 12 | GO:0080057: sepal vascular tissue pattern formation | 0.00E+00 |
| 13 | GO:1990258: histone glutamine methylation | 0.00E+00 |
| 14 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 9.28E-08 |
| 15 | GO:0006364: rRNA processing | 1.51E-06 |
| 16 | GO:0031167: rRNA methylation | 2.89E-06 |
| 17 | GO:0001510: RNA methylation | 1.57E-05 |
| 18 | GO:0051775: response to redox state | 3.77E-05 |
| 19 | GO:0015865: purine nucleotide transport | 9.40E-05 |
| 20 | GO:0045041: protein import into mitochondrial intermembrane space | 9.40E-05 |
| 21 | GO:0007005: mitochondrion organization | 1.14E-04 |
| 22 | GO:0008033: tRNA processing | 1.63E-04 |
| 23 | GO:0045039: protein import into mitochondrial inner membrane | 1.63E-04 |
| 24 | GO:0006013: mannose metabolic process | 1.63E-04 |
| 25 | GO:0009298: GDP-mannose biosynthetic process | 2.40E-04 |
| 26 | GO:0046902: regulation of mitochondrial membrane permeability | 2.40E-04 |
| 27 | GO:0007276: gamete generation | 2.40E-04 |
| 28 | GO:0051131: chaperone-mediated protein complex assembly | 2.40E-04 |
| 29 | GO:0000460: maturation of 5.8S rRNA | 3.24E-04 |
| 30 | GO:0042254: ribosome biogenesis | 3.73E-04 |
| 31 | GO:0000470: maturation of LSU-rRNA | 5.07E-04 |
| 32 | GO:0006458: 'de novo' protein folding | 6.05E-04 |
| 33 | GO:0042026: protein refolding | 6.05E-04 |
| 34 | GO:0009423: chorismate biosynthetic process | 6.05E-04 |
| 35 | GO:0009744: response to sucrose | 6.76E-04 |
| 36 | GO:0009396: folic acid-containing compound biosynthetic process | 7.07E-04 |
| 37 | GO:0042255: ribosome assembly | 8.13E-04 |
| 38 | GO:0009651: response to salt stress | 9.05E-04 |
| 39 | GO:0006189: 'de novo' IMP biosynthetic process | 1.04E-03 |
| 40 | GO:0098656: anion transmembrane transport | 1.04E-03 |
| 41 | GO:0035999: tetrahydrofolate interconversion | 1.15E-03 |
| 42 | GO:0009073: aromatic amino acid family biosynthetic process | 1.40E-03 |
| 43 | GO:0006820: anion transport | 1.53E-03 |
| 44 | GO:0006626: protein targeting to mitochondrion | 1.67E-03 |
| 45 | GO:0006094: gluconeogenesis | 1.67E-03 |
| 46 | GO:0010588: cotyledon vascular tissue pattern formation | 1.67E-03 |
| 47 | GO:0019853: L-ascorbic acid biosynthetic process | 1.95E-03 |
| 48 | GO:0006487: protein N-linked glycosylation | 2.25E-03 |
| 49 | GO:0051302: regulation of cell division | 2.40E-03 |
| 50 | GO:0061077: chaperone-mediated protein folding | 2.56E-03 |
| 51 | GO:0010501: RNA secondary structure unwinding | 3.40E-03 |
| 52 | GO:0010154: fruit development | 3.58E-03 |
| 53 | GO:0010305: leaf vascular tissue pattern formation | 3.58E-03 |
| 54 | GO:0080156: mitochondrial mRNA modification | 4.13E-03 |
| 55 | GO:0001666: response to hypoxia | 5.31E-03 |
| 56 | GO:0009408: response to heat | 5.96E-03 |
| 57 | GO:0016049: cell growth | 6.16E-03 |
| 58 | GO:0048364: root development | 6.21E-03 |
| 59 | GO:0046686: response to cadmium ion | 6.74E-03 |
| 60 | GO:0048527: lateral root development | 7.05E-03 |
| 61 | GO:0009631: cold acclimation | 7.05E-03 |
| 62 | GO:0009853: photorespiration | 7.51E-03 |
| 63 | GO:0042542: response to hydrogen peroxide | 8.71E-03 |
| 64 | GO:0009846: pollen germination | 1.05E-02 |
| 65 | GO:0006096: glycolytic process | 1.24E-02 |
| 66 | GO:0048367: shoot system development | 1.27E-02 |
| 67 | GO:0048316: seed development | 1.27E-02 |
| 68 | GO:0009845: seed germination | 1.76E-02 |
| 69 | GO:0009790: embryo development | 1.86E-02 |
| 70 | GO:0006633: fatty acid biosynthetic process | 1.95E-02 |
| 71 | GO:0006413: translational initiation | 1.99E-02 |
| 72 | GO:0009414: response to water deprivation | 2.10E-02 |
| 73 | GO:0009451: RNA modification | 2.12E-02 |
| 74 | GO:0009617: response to bacterium | 2.37E-02 |
| 75 | GO:0009409: response to cold | 2.91E-02 |
| 76 | GO:0006970: response to osmotic stress | 3.01E-02 |
| 77 | GO:0009723: response to ethylene | 3.16E-02 |
| 78 | GO:0048366: leaf development | 3.20E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0001072: transcription antitermination factor activity, RNA binding | 0.00E+00 |
| 2 | GO:0102132: 3-oxo-pimeloyl-[acp] methyl ester reductase activity | 0.00E+00 |
| 3 | GO:1990259: histone-glutamine methyltransferase activity | 0.00E+00 |
| 4 | GO:0004615: phosphomannomutase activity | 0.00E+00 |
| 5 | GO:0004107: chorismate synthase activity | 0.00E+00 |
| 6 | GO:0004316: 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity | 0.00E+00 |
| 7 | GO:0030515: snoRNA binding | 3.27E-08 |
| 8 | GO:0043021: ribonucleoprotein complex binding | 9.28E-08 |
| 9 | GO:0008649: rRNA methyltransferase activity | 3.60E-07 |
| 10 | GO:0005507: copper ion binding | 2.87E-06 |
| 11 | GO:0042134: rRNA primary transcript binding | 3.77E-05 |
| 12 | GO:0004638: phosphoribosylaminoimidazole carboxylase activity | 3.77E-05 |
| 13 | GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity | 3.77E-05 |
| 14 | GO:0003723: RNA binding | 2.40E-04 |
| 15 | GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity | 2.40E-04 |
| 16 | GO:0005471: ATP:ADP antiporter activity | 4.13E-04 |
| 17 | GO:0031369: translation initiation factor binding | 5.07E-04 |
| 18 | GO:0051287: NAD binding | 8.11E-04 |
| 19 | GO:0015288: porin activity | 8.13E-04 |
| 20 | GO:0008308: voltage-gated anion channel activity | 9.23E-04 |
| 21 | GO:0044183: protein binding involved in protein folding | 1.40E-03 |
| 22 | GO:0000166: nucleotide binding | 1.58E-03 |
| 23 | GO:0010181: FMN binding | 3.76E-03 |
| 24 | GO:0004004: ATP-dependent RNA helicase activity | 5.94E-03 |
| 25 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 6.38E-03 |
| 26 | GO:0050897: cobalt ion binding | 7.05E-03 |
| 27 | GO:0003746: translation elongation factor activity | 7.51E-03 |
| 28 | GO:0003697: single-stranded DNA binding | 7.51E-03 |
| 29 | GO:0050661: NADP binding | 8.23E-03 |
| 30 | GO:0003735: structural constituent of ribosome | 9.20E-03 |
| 31 | GO:0003690: double-stranded DNA binding | 1.13E-02 |
| 32 | GO:0051082: unfolded protein binding | 1.42E-02 |
| 33 | GO:0008026: ATP-dependent helicase activity | 1.48E-02 |
| 34 | GO:0004386: helicase activity | 1.51E-02 |
| 35 | GO:0008565: protein transporter activity | 1.89E-02 |
| 36 | GO:0003676: nucleic acid binding | 2.31E-02 |
| 37 | GO:0003743: translation initiation factor activity | 2.33E-02 |
| 38 | GO:0003729: mRNA binding | 3.20E-02 |
| 39 | GO:0003924: GTPase activity | 4.39E-02 |
| 40 | GO:0004519: endonuclease activity | 4.66E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0034457: Mpp10 complex | 0.00E+00 |
| 2 | GO:0019034: viral replication complex | 0.00E+00 |
| 3 | GO:0042719: mitochondrial intermembrane space protein transporter complex | 0.00E+00 |
| 4 | GO:0005730: nucleolus | 1.65E-11 |
| 5 | GO:0005739: mitochondrion | 2.22E-09 |
| 6 | GO:0070545: PeBoW complex | 9.28E-08 |
| 7 | GO:0015030: Cajal body | 1.51E-07 |
| 8 | GO:0032040: small-subunit processome | 3.51E-07 |
| 9 | GO:0005774: vacuolar membrane | 2.62E-06 |
| 10 | GO:0031428: box C/D snoRNP complex | 4.50E-06 |
| 11 | GO:0030687: preribosome, large subunit precursor | 9.09E-06 |
| 12 | GO:0005740: mitochondrial envelope | 2.99E-05 |
| 13 | GO:0071541: eukaryotic translation initiation factor 3 complex, eIF3m | 3.77E-05 |
| 14 | GO:0005747: mitochondrial respiratory chain complex I | 7.43E-05 |
| 15 | GO:0005759: mitochondrial matrix | 1.78E-04 |
| 16 | GO:0016363: nuclear matrix | 6.05E-04 |
| 17 | GO:0005762: mitochondrial large ribosomal subunit | 6.05E-04 |
| 18 | GO:0009536: plastid | 9.00E-04 |
| 19 | GO:0046930: pore complex | 9.23E-04 |
| 20 | GO:0005834: heterotrimeric G-protein complex | 1.12E-03 |
| 21 | GO:0005852: eukaryotic translation initiation factor 3 complex | 1.40E-03 |
| 22 | GO:0009941: chloroplast envelope | 1.62E-03 |
| 23 | GO:0019013: viral nucleocapsid | 1.67E-03 |
| 24 | GO:0005773: vacuole | 2.01E-03 |
| 25 | GO:0043234: protein complex | 2.10E-03 |
| 26 | GO:0005758: mitochondrial intermembrane space | 2.25E-03 |
| 27 | GO:0005741: mitochondrial outer membrane | 2.56E-03 |
| 28 | GO:0016592: mediator complex | 4.32E-03 |
| 29 | GO:0005743: mitochondrial inner membrane | 5.54E-03 |
| 30 | GO:0015934: large ribosomal subunit | 7.05E-03 |
| 31 | GO:0009507: chloroplast | 1.17E-02 |
| 32 | GO:0005732: small nucleolar ribonucleoprotein complex | 1.51E-02 |
| 33 | GO:0005654: nucleoplasm | 1.63E-02 |
| 34 | GO:0005829: cytosol | 2.01E-02 |
| 35 | GO:0005618: cell wall | 2.20E-02 |
| 36 | GO:0009505: plant-type cell wall | 2.69E-02 |
| 37 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 3.05E-02 |
| 38 | GO:0009570: chloroplast stroma | 4.11E-02 |
| 39 | GO:0016020: membrane | 4.16E-02 |