Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G31800

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:2000541: positive regulation of protein geranylgeranylation0.00E+00
2GO:0006182: cGMP biosynthetic process0.00E+00
3GO:0072722: response to amitrole0.00E+00
4GO:0042430: indole-containing compound metabolic process0.00E+00
5GO:0042742: defense response to bacterium3.15E-09
6GO:0009617: response to bacterium1.47E-08
7GO:0034976: response to endoplasmic reticulum stress4.31E-08
8GO:0006457: protein folding2.57E-07
9GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response2.65E-06
10GO:0071456: cellular response to hypoxia5.88E-06
11GO:0045454: cell redox homeostasis3.00E-05
12GO:0009627: systemic acquired resistance5.72E-05
13GO:0055114: oxidation-reduction process6.20E-05
14GO:0009697: salicylic acid biosynthetic process8.14E-05
15GO:0046686: response to cadmium ion8.21E-05
16GO:0006099: tricarboxylic acid cycle1.29E-04
17GO:1900056: negative regulation of leaf senescence2.13E-04
18GO:0010150: leaf senescence2.15E-04
19GO:0006102: isocitrate metabolic process2.69E-04
20GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline2.69E-04
21GO:0019276: UDP-N-acetylgalactosamine metabolic process2.77E-04
22GO:0034975: protein folding in endoplasmic reticulum2.77E-04
23GO:0051938: L-glutamate import2.77E-04
24GO:0006047: UDP-N-acetylglucosamine metabolic process2.77E-04
25GO:0010421: hydrogen peroxide-mediated programmed cell death2.77E-04
26GO:0042964: thioredoxin reduction2.77E-04
27GO:0046244: salicylic acid catabolic process2.77E-04
28GO:0010120: camalexin biosynthetic process3.32E-04
29GO:0009620: response to fungus4.64E-04
30GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine6.09E-04
31GO:0045905: positive regulation of translational termination6.09E-04
32GO:0043091: L-arginine import6.09E-04
33GO:0080183: response to photooxidative stress6.09E-04
34GO:0045901: positive regulation of translational elongation6.09E-04
35GO:0080151: positive regulation of salicylic acid mediated signaling pathway6.09E-04
36GO:0015802: basic amino acid transport6.09E-04
37GO:0006452: translational frameshifting6.09E-04
38GO:0009866: induced systemic resistance, ethylene mediated signaling pathway6.09E-04
39GO:0044419: interspecies interaction between organisms6.09E-04
40GO:0030003: cellular cation homeostasis6.09E-04
41GO:0006468: protein phosphorylation6.11E-04
42GO:0009682: induced systemic resistance6.38E-04
43GO:0009817: defense response to fungus, incompatible interaction7.57E-04
44GO:0006011: UDP-glucose metabolic process9.88E-04
45GO:0010272: response to silver ion9.88E-04
46GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway9.88E-04
47GO:0006421: asparaginyl-tRNA aminoacylation9.88E-04
48GO:0006048: UDP-N-acetylglucosamine biosynthetic process9.88E-04
49GO:0055074: calcium ion homeostasis9.88E-04
50GO:0009062: fatty acid catabolic process9.88E-04
51GO:0009863: salicylic acid mediated signaling pathway1.27E-03
52GO:0009751: response to salicylic acid1.38E-03
53GO:0006874: cellular calcium ion homeostasis1.40E-03
54GO:0010116: positive regulation of abscisic acid biosynthetic process1.41E-03
55GO:0002239: response to oomycetes1.41E-03
56GO:0072334: UDP-galactose transmembrane transport1.41E-03
57GO:0003333: amino acid transmembrane transport1.54E-03
58GO:0016998: cell wall macromolecule catabolic process1.54E-03
59GO:0031348: negative regulation of defense response1.68E-03
60GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway1.89E-03
61GO:0046345: abscisic acid catabolic process1.89E-03
62GO:0009306: protein secretion1.99E-03
63GO:0018344: protein geranylgeranylation2.41E-03
64GO:0010225: response to UV-C2.41E-03
65GO:0000304: response to singlet oxygen2.41E-03
66GO:0034052: positive regulation of plant-type hypersensitive response2.41E-03
67GO:0009626: plant-type hypersensitive response2.73E-03
68GO:0009851: auxin biosynthetic process2.89E-03
69GO:0006561: proline biosynthetic process2.98E-03
70GO:0010405: arabinogalactan protein metabolic process2.98E-03
71GO:0010256: endomembrane system organization2.98E-03
72GO:0018258: protein O-linked glycosylation via hydroxyproline2.98E-03
73GO:0009553: embryo sac development3.07E-03
74GO:0000302: response to reactive oxygen species3.09E-03
75GO:0006952: defense response3.50E-03
76GO:0042372: phylloquinone biosynthetic process3.58E-03
77GO:0006979: response to oxidative stress4.19E-03
78GO:1902074: response to salt4.23E-03
79GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c4.23E-03
80GO:1900057: positive regulation of leaf senescence4.23E-03
81GO:0009615: response to virus4.47E-03
82GO:0006605: protein targeting4.90E-03
83GO:0030091: protein repair4.90E-03
84GO:0006875: cellular metal ion homeostasis4.90E-03
85GO:0010204: defense response signaling pathway, resistance gene-independent5.62E-03
86GO:0030968: endoplasmic reticulum unfolded protein response5.62E-03
87GO:0009699: phenylpropanoid biosynthetic process5.62E-03
88GO:0019430: removal of superoxide radicals5.62E-03
89GO:0008219: cell death5.83E-03
90GO:0010112: regulation of systemic acquired resistance6.37E-03
91GO:0009060: aerobic respiration6.37E-03
92GO:0046685: response to arsenic-containing substance6.37E-03
93GO:0009821: alkaloid biosynthetic process6.37E-03
94GO:0043067: regulation of programmed cell death7.15E-03
95GO:0030042: actin filament depolymerization7.15E-03
96GO:0048354: mucilage biosynthetic process involved in seed coat development7.15E-03
97GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway7.15E-03
98GO:0045087: innate immune response7.40E-03
99GO:0006032: chitin catabolic process7.97E-03
100GO:0009688: abscisic acid biosynthetic process7.97E-03
101GO:0007064: mitotic sister chromatid cohesion7.97E-03
102GO:0009870: defense response signaling pathway, resistance gene-dependent7.97E-03
103GO:0000272: polysaccharide catabolic process8.82E-03
104GO:0016485: protein processing8.82E-03
105GO:0006816: calcium ion transport8.82E-03
106GO:0009089: lysine biosynthetic process via diaminopimelate8.82E-03
107GO:0052544: defense response by callose deposition in cell wall8.82E-03
108GO:0009073: aromatic amino acid family biosynthetic process8.82E-03
109GO:0042542: response to hydrogen peroxide9.17E-03
110GO:0051707: response to other organism9.55E-03
111GO:0006790: sulfur compound metabolic process9.70E-03
112GO:0012501: programmed cell death9.70E-03
113GO:0002213: defense response to insect9.70E-03
114GO:0015706: nitrate transport9.70E-03
115GO:0009718: anthocyanin-containing compound biosynthetic process1.06E-02
116GO:0010075: regulation of meristem growth1.06E-02
117GO:0009934: regulation of meristem structural organization1.16E-02
118GO:0002237: response to molecule of bacterial origin1.16E-02
119GO:0009846: pollen germination1.20E-02
120GO:0006970: response to osmotic stress1.23E-02
121GO:0009735: response to cytokinin1.24E-02
122GO:0046854: phosphatidylinositol phosphorylation1.25E-02
123GO:0010167: response to nitrate1.25E-02
124GO:0046688: response to copper ion1.25E-02
125GO:0006486: protein glycosylation1.29E-02
126GO:0000162: tryptophan biosynthetic process1.35E-02
127GO:0005992: trehalose biosynthetic process1.46E-02
128GO:0080147: root hair cell development1.46E-02
129GO:0006825: copper ion transport1.56E-02
130GO:0048316: seed development1.58E-02
131GO:0007165: signal transduction1.71E-02
132GO:0030433: ubiquitin-dependent ERAD pathway1.78E-02
133GO:0019748: secondary metabolic process1.78E-02
134GO:0009411: response to UV1.89E-02
135GO:0010227: floral organ abscission1.89E-02
136GO:0015031: protein transport2.00E-02
137GO:0010089: xylem development2.01E-02
138GO:0010584: pollen exine formation2.01E-02
139GO:0008033: tRNA processing2.25E-02
140GO:0000413: protein peptidyl-prolyl isomerization2.25E-02
141GO:0010118: stomatal movement2.25E-02
142GO:0032259: methylation2.27E-02
143GO:0010197: polar nucleus fusion2.37E-02
144GO:0048868: pollen tube development2.37E-02
145GO:0009408: response to heat2.40E-02
146GO:0042752: regulation of circadian rhythm2.50E-02
147GO:0006623: protein targeting to vacuole2.63E-02
148GO:0006635: fatty acid beta-oxidation2.76E-02
149GO:0002229: defense response to oomycetes2.76E-02
150GO:0010193: response to ozone2.76E-02
151GO:0009630: gravitropism2.89E-02
152GO:0007264: small GTPase mediated signal transduction2.89E-02
153GO:0006413: translational initiation2.97E-02
154GO:0030163: protein catabolic process3.02E-02
155GO:0009567: double fertilization forming a zygote and endosperm3.16E-02
156GO:0006464: cellular protein modification process3.16E-02
157GO:0050832: defense response to fungus3.33E-02
158GO:0016126: sterol biosynthetic process3.58E-02
159GO:0007166: cell surface receptor signaling pathway3.64E-02
160GO:0042128: nitrate assimilation3.87E-02
161GO:0009651: response to salt stress4.15E-02
162GO:0016311: dephosphorylation4.17E-02
163GO:0016049: cell growth4.17E-02
164GO:0006499: N-terminal protein myristoylation4.64E-02
165GO:0009407: toxin catabolic process4.64E-02
166GO:0009737: response to abscisic acid4.70E-02
167GO:0010043: response to zinc ion4.79E-02
168GO:0007568: aging4.79E-02
169GO:0048527: lateral root development4.79E-02
170GO:0006865: amino acid transport4.95E-02
RankGO TermAdjusted P value
1GO:0050269: coniferyl-aldehyde dehydrogenase activity0.00E+00
2GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
3GO:0004631: phosphomevalonate kinase activity0.00E+00
4GO:0005092: GDP-dissociation inhibitor activity0.00E+00
5GO:0016312: inositol bisphosphate phosphatase activity0.00E+00
6GO:0003756: protein disulfide isomerase activity2.21E-07
7GO:0016614: oxidoreductase activity, acting on CH-OH group of donors6.28E-06
8GO:0050660: flavin adenine dinucleotide binding1.39E-05
9GO:0004449: isocitrate dehydrogenase (NAD+) activity2.85E-05
10GO:0004674: protein serine/threonine kinase activity3.17E-05
11GO:0016301: kinase activity4.13E-05
12GO:0005509: calcium ion binding6.43E-05
13GO:0009055: electron carrier activity6.71E-05
14GO:0004656: procollagen-proline 4-dioxygenase activity1.62E-04
15GO:0010285: L,L-diaminopimelate aminotransferase activity2.77E-04
16GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity2.77E-04
17GO:0052630: UDP-N-acetylgalactosamine diphosphorylase activity2.77E-04
18GO:0008809: carnitine racemase activity2.77E-04
19GO:0033984: indole-3-glycerol-phosphate lyase activity2.77E-04
20GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity2.77E-04
21GO:0048037: cofactor binding2.77E-04
22GO:0008909: isochorismate synthase activity2.77E-04
23GO:0003977: UDP-N-acetylglucosamine diphosphorylase activity2.77E-04
24GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity2.77E-04
25GO:0051082: unfolded protein binding5.34E-04
26GO:0004776: succinate-CoA ligase (GDP-forming) activity6.09E-04
27GO:0004775: succinate-CoA ligase (ADP-forming) activity6.09E-04
28GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity6.09E-04
29GO:0004816: asparagine-tRNA ligase activity9.88E-04
30GO:0004383: guanylate cyclase activity9.88E-04
31GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity9.88E-04
32GO:0000030: mannosyltransferase activity9.88E-04
33GO:0005093: Rab GDP-dissociation inhibitor activity9.88E-04
34GO:0016531: copper chaperone activity9.88E-04
35GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity9.88E-04
36GO:0004148: dihydrolipoyl dehydrogenase activity9.88E-04
37GO:0019003: GDP binding9.88E-04
38GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.02E-03
39GO:0004970: ionotropic glutamate receptor activity1.04E-03
40GO:0005217: intracellular ligand-gated ion channel activity1.04E-03
41GO:0031418: L-ascorbic acid binding1.27E-03
42GO:0005524: ATP binding1.37E-03
43GO:0004165: dodecenoyl-CoA delta-isomerase activity1.41E-03
44GO:0015189: L-lysine transmembrane transporter activity1.41E-03
45GO:0035529: NADH pyrophosphatase activity1.41E-03
46GO:0015181: arginine transmembrane transporter activity1.41E-03
47GO:0005460: UDP-glucose transmembrane transporter activity1.41E-03
48GO:0004298: threonine-type endopeptidase activity1.54E-03
49GO:0004834: tryptophan synthase activity1.89E-03
50GO:0005313: L-glutamate transmembrane transporter activity1.89E-03
51GO:0004031: aldehyde oxidase activity1.89E-03
52GO:0050302: indole-3-acetaldehyde oxidase activity1.89E-03
53GO:0047631: ADP-ribose diphosphatase activity2.41E-03
54GO:0010294: abscisic acid glucosyltransferase activity2.41E-03
55GO:0005459: UDP-galactose transmembrane transporter activity2.41E-03
56GO:0017137: Rab GTPase binding2.41E-03
57GO:0030976: thiamine pyrophosphate binding2.98E-03
58GO:1990714: hydroxyproline O-galactosyltransferase activity2.98E-03
59GO:0000210: NAD+ diphosphatase activity2.98E-03
60GO:0004029: aldehyde dehydrogenase (NAD) activity2.98E-03
61GO:0015035: protein disulfide oxidoreductase activity3.31E-03
62GO:0008113: peptide-methionine (S)-S-oxide reductase activity3.58E-03
63GO:0033743: peptide-methionine (R)-S-oxide reductase activity3.58E-03
64GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity3.58E-03
65GO:0005261: cation channel activity3.58E-03
66GO:0005506: iron ion binding3.99E-03
67GO:0043022: ribosome binding4.90E-03
68GO:0004683: calmodulin-dependent protein kinase activity5.26E-03
69GO:0030247: polysaccharide binding5.26E-03
70GO:0008757: S-adenosylmethionine-dependent methyltransferase activity5.55E-03
71GO:0008135: translation factor activity, RNA binding5.62E-03
72GO:0050897: cobalt ion binding6.75E-03
73GO:0030955: potassium ion binding7.15E-03
74GO:0016844: strictosidine synthase activity7.15E-03
75GO:0015112: nitrate transmembrane transporter activity7.15E-03
76GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity7.15E-03
77GO:0004743: pyruvate kinase activity7.15E-03
78GO:0015174: basic amino acid transmembrane transporter activity7.15E-03
79GO:0045309: protein phosphorylated amino acid binding7.15E-03
80GO:0003746: translation elongation factor activity7.40E-03
81GO:0004568: chitinase activity7.97E-03
82GO:0008171: O-methyltransferase activity7.97E-03
83GO:0008559: xenobiotic-transporting ATPase activity8.82E-03
84GO:0004129: cytochrome-c oxidase activity8.82E-03
85GO:0019904: protein domain specific binding8.82E-03
86GO:0008378: galactosyltransferase activity9.70E-03
87GO:0051537: 2 iron, 2 sulfur cluster binding1.03E-02
88GO:0031072: heat shock protein binding1.06E-02
89GO:0005262: calcium channel activity1.06E-02
90GO:0004022: alcohol dehydrogenase (NAD) activity1.06E-02
91GO:0051287: NAD binding1.16E-02
92GO:0008061: chitin binding1.25E-02
93GO:0003712: transcription cofactor activity1.25E-02
94GO:0008233: peptidase activity1.43E-02
95GO:0015171: amino acid transmembrane transporter activity1.43E-02
96GO:0080043: quercetin 3-O-glucosyltransferase activity1.68E-02
97GO:0080044: quercetin 7-O-glucosyltransferase activity1.68E-02
98GO:0016779: nucleotidyltransferase activity1.78E-02
99GO:0004499: N,N-dimethylaniline monooxygenase activity2.01E-02
100GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen2.03E-02
101GO:0016758: transferase activity, transferring hexosyl groups2.25E-02
102GO:0005507: copper ion binding2.41E-02
103GO:0004791: thioredoxin-disulfide reductase activity2.50E-02
104GO:0016853: isomerase activity2.50E-02
105GO:0010181: FMN binding2.50E-02
106GO:0004197: cysteine-type endopeptidase activity2.89E-02
107GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor3.02E-02
108GO:0008483: transaminase activity3.30E-02
109GO:0008194: UDP-glycosyltransferase activity3.56E-02
110GO:0051213: dioxygenase activity3.58E-02
111GO:0003743: translation initiation factor activity3.72E-02
112GO:0009931: calcium-dependent protein serine/threonine kinase activity3.87E-02
113GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity4.33E-02
114GO:0005096: GTPase activator activity4.48E-02
115GO:0015238: drug transmembrane transporter activity4.48E-02
116GO:0004222: metalloendopeptidase activity4.64E-02
117GO:0008168: methyltransferase activity4.72E-02
118GO:0030145: manganese ion binding4.79E-02
119GO:0000287: magnesium ion binding4.81E-02
RankGO TermAdjusted P value
1GO:0000327: lytic vacuole within protein storage vacuole0.00E+00
2GO:0005783: endoplasmic reticulum9.57E-12
3GO:0005788: endoplasmic reticulum lumen4.30E-11
4GO:0005886: plasma membrane2.52E-06
5GO:0005829: cytosol3.91E-05
6GO:0045252: oxoglutarate dehydrogenase complex2.77E-04
7GO:0019773: proteasome core complex, alpha-subunit complex3.32E-04
8GO:0005774: vacuolar membrane3.33E-04
9GO:0005758: mitochondrial intermembrane space1.27E-03
10GO:0005968: Rab-protein geranylgeranyltransferase complex1.41E-03
11GO:0005839: proteasome core complex1.54E-03
12GO:0005741: mitochondrial outer membrane1.54E-03
13GO:0009898: cytoplasmic side of plasma membrane1.89E-03
14GO:0005746: mitochondrial respiratory chain2.41E-03
15GO:0016592: mediator complex3.31E-03
16GO:0030173: integral component of Golgi membrane3.58E-03
17GO:0000326: protein storage vacuole5.62E-03
18GO:0005759: mitochondrial matrix5.67E-03
19GO:0000325: plant-type vacuole6.75E-03
20GO:0016021: integral component of membrane6.81E-03
21GO:0030665: clathrin-coated vesicle membrane7.15E-03
22GO:0005576: extracellular region7.28E-03
23GO:0005740: mitochondrial envelope7.97E-03
24GO:0017119: Golgi transport complex7.97E-03
25GO:0005750: mitochondrial respiratory chain complex III1.16E-02
26GO:0030176: integral component of endoplasmic reticulum membrane1.25E-02
27GO:0000502: proteasome complex1.29E-02
28GO:0015629: actin cytoskeleton1.89E-02
29GO:0048046: apoplast1.99E-02
30GO:0005623: cell2.37E-02
31GO:0016020: membrane2.50E-02
32GO:0005737: cytoplasm3.80E-02
33GO:0005773: vacuole4.28E-02
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Gene type



Gene DE type