GO Enrichment Analysis of Co-expressed Genes with
AT4G31050
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:2000121: regulation of removal of superoxide radicals | 0.00E+00 |
| 2 | GO:0071370: cellular response to gibberellin stimulus | 5.34E-05 |
| 3 | GO:0000481: maturation of 5S rRNA | 5.34E-05 |
| 4 | GO:0034337: RNA folding | 5.34E-05 |
| 5 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 5.34E-05 |
| 6 | GO:0006176: dATP biosynthetic process from ADP | 5.34E-05 |
| 7 | GO:0019684: photosynthesis, light reaction | 5.99E-05 |
| 8 | GO:1900871: chloroplast mRNA modification | 1.30E-04 |
| 9 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 1.30E-04 |
| 10 | GO:0006518: peptide metabolic process | 2.22E-04 |
| 11 | GO:0045493: xylan catabolic process | 2.22E-04 |
| 12 | GO:0009226: nucleotide-sugar biosynthetic process | 3.25E-04 |
| 13 | GO:0009152: purine ribonucleotide biosynthetic process | 3.25E-04 |
| 14 | GO:0046653: tetrahydrofolate metabolic process | 3.25E-04 |
| 15 | GO:0034052: positive regulation of plant-type hypersensitive response | 5.52E-04 |
| 16 | GO:0015995: chlorophyll biosynthetic process | 5.86E-04 |
| 17 | GO:0042793: transcription from plastid promoter | 6.76E-04 |
| 18 | GO:0010196: nonphotochemical quenching | 9.40E-04 |
| 19 | GO:0010439: regulation of glucosinolate biosynthetic process | 1.08E-03 |
| 20 | GO:0043068: positive regulation of programmed cell death | 1.08E-03 |
| 21 | GO:0032508: DNA duplex unwinding | 1.08E-03 |
| 22 | GO:0010492: maintenance of shoot apical meristem identity | 1.08E-03 |
| 23 | GO:0010206: photosystem II repair | 1.38E-03 |
| 24 | GO:0048507: meristem development | 1.38E-03 |
| 25 | GO:0005982: starch metabolic process | 1.54E-03 |
| 26 | GO:0009089: lysine biosynthetic process via diaminopimelate | 1.88E-03 |
| 27 | GO:0009684: indoleacetic acid biosynthetic process | 1.88E-03 |
| 28 | GO:0009767: photosynthetic electron transport chain | 2.25E-03 |
| 29 | GO:0005985: sucrose metabolic process | 2.63E-03 |
| 30 | GO:0009768: photosynthesis, light harvesting in photosystem I | 3.24E-03 |
| 31 | GO:0009814: defense response, incompatible interaction | 3.68E-03 |
| 32 | GO:0006012: galactose metabolic process | 3.90E-03 |
| 33 | GO:0080022: primary root development | 4.60E-03 |
| 34 | GO:0019252: starch biosynthetic process | 5.34E-03 |
| 35 | GO:0000302: response to reactive oxygen species | 5.60E-03 |
| 36 | GO:0002229: defense response to oomycetes | 5.60E-03 |
| 37 | GO:0019761: glucosinolate biosynthetic process | 5.86E-03 |
| 38 | GO:0030163: protein catabolic process | 6.12E-03 |
| 39 | GO:0006508: proteolysis | 7.14E-03 |
| 40 | GO:0015979: photosynthesis | 7.20E-03 |
| 41 | GO:0010411: xyloglucan metabolic process | 8.09E-03 |
| 42 | GO:0018298: protein-chromophore linkage | 8.68E-03 |
| 43 | GO:0032259: methylation | 8.91E-03 |
| 44 | GO:0009407: toxin catabolic process | 9.30E-03 |
| 45 | GO:0010218: response to far red light | 9.30E-03 |
| 46 | GO:0009409: response to cold | 9.99E-03 |
| 47 | GO:0009637: response to blue light | 1.02E-02 |
| 48 | GO:0009853: photorespiration | 1.02E-02 |
| 49 | GO:0008152: metabolic process | 1.03E-02 |
| 50 | GO:0034599: cellular response to oxidative stress | 1.06E-02 |
| 51 | GO:0010114: response to red light | 1.23E-02 |
| 52 | GO:0009636: response to toxic substance | 1.33E-02 |
| 53 | GO:0006855: drug transmembrane transport | 1.37E-02 |
| 54 | GO:0006486: protein glycosylation | 1.51E-02 |
| 55 | GO:0009626: plant-type hypersensitive response | 1.78E-02 |
| 56 | GO:0009624: response to nematode | 1.94E-02 |
| 57 | GO:0009058: biosynthetic process | 2.37E-02 |
| 58 | GO:0042744: hydrogen peroxide catabolic process | 2.50E-02 |
| 59 | GO:0045490: pectin catabolic process | 2.87E-02 |
| 60 | GO:0009617: response to bacterium | 3.25E-02 |
| 61 | GO:0009658: chloroplast organization | 3.91E-02 |
| 62 | GO:0042254: ribosome biogenesis | 3.96E-02 |
| 63 | GO:0009723: response to ethylene | 4.34E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043864: indoleacetamide hydrolase activity | 0.00E+00 |
| 2 | GO:0080176: xyloglucan 1,6-alpha-xylosidase activity | 0.00E+00 |
| 3 | GO:0015252: hydrogen ion channel activity | 0.00E+00 |
| 4 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 5 | GO:0047513: 1,2-alpha-L-fucosidase activity | 0.00E+00 |
| 6 | GO:0061634: alpha-D-xyloside xylohydrolase | 0.00E+00 |
| 7 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 1.30E-04 |
| 8 | GO:0033201: alpha-1,4-glucan synthase activity | 1.30E-04 |
| 9 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 2.22E-04 |
| 10 | GO:0008864: formyltetrahydrofolate deformylase activity | 2.22E-04 |
| 11 | GO:0004373: glycogen (starch) synthase activity | 2.22E-04 |
| 12 | GO:0016851: magnesium chelatase activity | 3.25E-04 |
| 13 | GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 4.35E-04 |
| 14 | GO:0009011: starch synthase activity | 4.35E-04 |
| 15 | GO:0009044: xylan 1,4-beta-xylosidase activity | 4.35E-04 |
| 16 | GO:0046556: alpha-L-arabinofuranosidase activity | 4.35E-04 |
| 17 | GO:0004040: amidase activity | 5.52E-04 |
| 18 | GO:0004130: cytochrome-c peroxidase activity | 6.76E-04 |
| 19 | GO:0004222: metalloendopeptidase activity | 7.10E-04 |
| 20 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 8.05E-04 |
| 21 | GO:0004564: beta-fructofuranosidase activity | 1.08E-03 |
| 22 | GO:0004034: aldose 1-epimerase activity | 1.08E-03 |
| 23 | GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity | 1.38E-03 |
| 24 | GO:0004575: sucrose alpha-glucosidase activity | 1.54E-03 |
| 25 | GO:0008378: galactosyltransferase activity | 2.06E-03 |
| 26 | GO:0004022: alcohol dehydrogenase (NAD) activity | 2.25E-03 |
| 27 | GO:0004252: serine-type endopeptidase activity | 2.67E-03 |
| 28 | GO:0031409: pigment binding | 2.83E-03 |
| 29 | GO:0005528: FK506 binding | 3.03E-03 |
| 30 | GO:0030570: pectate lyase activity | 3.90E-03 |
| 31 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 4.84E-03 |
| 32 | GO:0016853: isomerase activity | 5.09E-03 |
| 33 | GO:0008237: metallopeptidase activity | 6.66E-03 |
| 34 | GO:0051213: dioxygenase activity | 7.22E-03 |
| 35 | GO:0016168: chlorophyll binding | 7.50E-03 |
| 36 | GO:0008236: serine-type peptidase activity | 8.38E-03 |
| 37 | GO:0015238: drug transmembrane transporter activity | 8.99E-03 |
| 38 | GO:0004364: glutathione transferase activity | 1.19E-02 |
| 39 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.37E-02 |
| 40 | GO:0016874: ligase activity | 1.86E-02 |
| 41 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 2.19E-02 |
| 42 | GO:0030246: carbohydrate binding | 2.23E-02 |
| 43 | GO:0016758: transferase activity, transferring hexosyl groups | 2.24E-02 |
| 44 | GO:0019843: rRNA binding | 2.28E-02 |
| 45 | GO:0016829: lyase activity | 2.41E-02 |
| 46 | GO:0015297: antiporter activity | 2.77E-02 |
| 47 | GO:0008168: methyltransferase activity | 3.81E-02 |
| 48 | GO:0004601: peroxidase activity | 3.91E-02 |
| 49 | GO:0003729: mRNA binding | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
| 2 | GO:0009534: chloroplast thylakoid | 7.95E-13 |
| 3 | GO:0009507: chloroplast | 2.15E-12 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 1.59E-08 |
| 5 | GO:0009543: chloroplast thylakoid lumen | 4.27E-07 |
| 6 | GO:0009570: chloroplast stroma | 2.20E-06 |
| 7 | GO:0009344: nitrite reductase complex [NAD(P)H] | 5.34E-05 |
| 8 | GO:0031977: thylakoid lumen | 6.08E-05 |
| 9 | GO:0010007: magnesium chelatase complex | 2.22E-04 |
| 10 | GO:0005775: vacuolar lumen | 3.25E-04 |
| 11 | GO:0009544: chloroplast ATP synthase complex | 4.35E-04 |
| 12 | GO:0009579: thylakoid | 5.94E-04 |
| 13 | GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o) | 6.76E-04 |
| 14 | GO:0031969: chloroplast membrane | 8.38E-04 |
| 15 | GO:0009941: chloroplast envelope | 9.31E-04 |
| 16 | GO:0009533: chloroplast stromal thylakoid | 9.40E-04 |
| 17 | GO:0009501: amyloplast | 1.08E-03 |
| 18 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.38E-03 |
| 19 | GO:0032040: small-subunit processome | 2.06E-03 |
| 20 | GO:0009508: plastid chromosome | 2.25E-03 |
| 21 | GO:0030095: chloroplast photosystem II | 2.43E-03 |
| 22 | GO:0030076: light-harvesting complex | 2.63E-03 |
| 23 | GO:0042651: thylakoid membrane | 3.24E-03 |
| 24 | GO:0009654: photosystem II oxygen evolving complex | 3.24E-03 |
| 25 | GO:0009522: photosystem I | 5.09E-03 |
| 26 | GO:0019898: extrinsic component of membrane | 5.34E-03 |
| 27 | GO:0009295: nucleoid | 6.66E-03 |
| 28 | GO:0009505: plant-type cell wall | 9.06E-03 |
| 29 | GO:0000325: plant-type vacuole | 9.61E-03 |
| 30 | GO:0031902: late endosome membrane | 1.16E-02 |
| 31 | GO:0010287: plastoglobule | 2.19E-02 |
| 32 | GO:0048046: apoplast | 3.46E-02 |
| 33 | GO:0005840: ribosome | 3.52E-02 |
| 34 | GO:0005618: cell wall | 3.85E-02 |
| 35 | GO:0000139: Golgi membrane | 4.53E-02 |