Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G30020

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process0.00E+00
2GO:0006114: glycerol biosynthetic process0.00E+00
3GO:0046322: negative regulation of fatty acid oxidation0.00E+00
4GO:0042493: response to drug0.00E+00
5GO:1905499: trichome papilla formation0.00E+00
6GO:0071555: cell wall organization4.02E-08
7GO:0007017: microtubule-based process6.66E-07
8GO:0010306: rhamnogalacturonan II biosynthetic process1.06E-05
9GO:0007155: cell adhesion1.15E-04
10GO:0009828: plant-type cell wall loosening1.47E-04
11GO:0019510: S-adenosylhomocysteine catabolic process1.58E-04
12GO:0060627: regulation of vesicle-mediated transport1.58E-04
13GO:0005980: glycogen catabolic process1.58E-04
14GO:0000032: cell wall mannoprotein biosynthetic process1.58E-04
15GO:0032025: response to cobalt ion1.58E-04
16GO:0042759: long-chain fatty acid biosynthetic process1.58E-04
17GO:0043686: co-translational protein modification1.58E-04
18GO:0009098: leucine biosynthetic process2.12E-04
19GO:0010411: xyloglucan metabolic process2.37E-04
20GO:0006949: syncytium formation2.50E-04
21GO:0016042: lipid catabolic process3.23E-04
22GO:0071457: cellular response to ozone3.60E-04
23GO:0033353: S-adenosylmethionine cycle3.60E-04
24GO:0071258: cellular response to gravity3.60E-04
25GO:0010025: wax biosynthetic process5.37E-04
26GO:0042546: cell wall biogenesis5.43E-04
27GO:0033591: response to L-ascorbic acid5.89E-04
28GO:0046168: glycerol-3-phosphate catabolic process5.89E-04
29GO:1901562: response to paraquat5.89E-04
30GO:0006065: UDP-glucuronate biosynthetic process5.89E-04
31GO:0090506: axillary shoot meristem initiation5.89E-04
32GO:0009664: plant-type cell wall organization6.88E-04
33GO:0016998: cell wall macromolecule catabolic process7.18E-04
34GO:0030245: cellulose catabolic process7.84E-04
35GO:0006072: glycerol-3-phosphate metabolic process8.43E-04
36GO:0009650: UV protection8.43E-04
37GO:0050482: arachidonic acid secretion8.43E-04
38GO:0009413: response to flooding8.43E-04
39GO:0009298: GDP-mannose biosynthetic process8.43E-04
40GO:0010371: regulation of gibberellin biosynthetic process8.43E-04
41GO:0071484: cellular response to light intensity8.43E-04
42GO:0009102: biotin biosynthetic process8.43E-04
43GO:0009831: plant-type cell wall modification involved in multidimensional cell growth8.52E-04
44GO:0042335: cuticle development1.07E-03
45GO:0009765: photosynthesis, light harvesting1.12E-03
46GO:0009956: radial pattern formation1.12E-03
47GO:0071486: cellular response to high light intensity1.12E-03
48GO:0048868: pollen tube development1.15E-03
49GO:0006665: sphingolipid metabolic process1.41E-03
50GO:0071493: cellular response to UV-B1.41E-03
51GO:0048359: mucilage metabolic process involved in seed coat development1.41E-03
52GO:0016120: carotene biosynthetic process1.41E-03
53GO:0045487: gibberellin catabolic process1.41E-03
54GO:0031365: N-terminal protein amino acid modification1.41E-03
55GO:0016123: xanthophyll biosynthetic process1.41E-03
56GO:0006869: lipid transport1.47E-03
57GO:0006014: D-ribose metabolic process1.74E-03
58GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway1.74E-03
59GO:0006629: lipid metabolic process1.75E-03
60GO:0005975: carbohydrate metabolic process1.90E-03
61GO:0006633: fatty acid biosynthetic process2.05E-03
62GO:0010067: procambium histogenesis2.09E-03
63GO:0009082: branched-chain amino acid biosynthetic process2.09E-03
64GO:0009942: longitudinal axis specification2.09E-03
65GO:0009099: valine biosynthetic process2.09E-03
66GO:0006644: phospholipid metabolic process2.84E-03
67GO:0007568: aging3.04E-03
68GO:0019430: removal of superoxide radicals3.25E-03
69GO:0009097: isoleucine biosynthetic process3.25E-03
70GO:0007389: pattern specification process3.25E-03
71GO:0016051: carbohydrate biosynthetic process3.33E-03
72GO:0006754: ATP biosynthetic process3.67E-03
73GO:0015780: nucleotide-sugar transport3.67E-03
74GO:0009826: unidimensional cell growth3.83E-03
75GO:0042761: very long-chain fatty acid biosynthetic process4.12E-03
76GO:0010015: root morphogenesis5.05E-03
77GO:0042538: hyperosmotic salinity response5.38E-03
78GO:0006486: protein glycosylation5.77E-03
79GO:0009933: meristem structural organization6.59E-03
80GO:0010223: secondary shoot formation6.59E-03
81GO:0009266: response to temperature stimulus6.59E-03
82GO:0051017: actin filament bundle assembly8.27E-03
83GO:0019953: sexual reproduction8.86E-03
84GO:0010431: seed maturation9.46E-03
85GO:0006730: one-carbon metabolic process1.01E-02
86GO:0009294: DNA mediated transformation1.07E-02
87GO:0009411: response to UV1.07E-02
88GO:0001944: vasculature development1.07E-02
89GO:0019722: calcium-mediated signaling1.14E-02
90GO:0010091: trichome branching1.14E-02
91GO:0010089: xylem development1.14E-02
92GO:0016117: carotenoid biosynthetic process1.20E-02
93GO:0000226: microtubule cytoskeleton organization1.27E-02
94GO:0010087: phloem or xylem histogenesis1.27E-02
95GO:0071472: cellular response to salt stress1.34E-02
96GO:0010305: leaf vascular tissue pattern formation1.34E-02
97GO:0045490: pectin catabolic process1.42E-02
98GO:0019252: starch biosynthetic process1.48E-02
99GO:0010583: response to cyclopentenone1.63E-02
100GO:0010090: trichome morphogenesis1.71E-02
101GO:0010252: auxin homeostasis1.78E-02
102GO:0007267: cell-cell signaling1.86E-02
103GO:0016311: dephosphorylation2.36E-02
104GO:0009860: pollen tube growth2.38E-02
105GO:0009817: defense response to fungus, incompatible interaction2.44E-02
106GO:0010043: response to zinc ion2.71E-02
107GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.83E-02
108GO:0010114: response to red light3.46E-02
109GO:0009926: auxin polar transport3.46E-02
110GO:0009644: response to high light intensity3.66E-02
111GO:0008643: carbohydrate transport3.66E-02
112GO:0009408: response to heat4.03E-02
113GO:0009414: response to water deprivation4.19E-02
114GO:0048364: root development4.21E-02
115GO:0009809: lignin biosynthetic process4.28E-02
116GO:0048367: shoot system development4.93E-02
RankGO TermAdjusted P value
1GO:0004076: biotin synthase activity0.00E+00
2GO:0043136: glycerol-3-phosphatase activity0.00E+00
3GO:0000121: glycerol-1-phosphatase activity0.00E+00
4GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity0.00E+00
5GO:0016631: enoyl-[acyl-carrier-protein] reductase activity0.00E+00
6GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity0.00E+00
7GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity0.00E+00
8GO:0045435: lycopene epsilon cyclase activity0.00E+00
9GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity0.00E+00
10GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity0.00E+00
11GO:0005200: structural constituent of cytoskeleton7.27E-06
12GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity1.06E-05
13GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds6.23E-05
14GO:0016762: xyloglucan:xyloglucosyl transferase activity1.11E-04
15GO:0047259: glucomannan 4-beta-mannosyltransferase activity1.58E-04
16GO:0004013: adenosylhomocysteinase activity1.58E-04
17GO:0008184: glycogen phosphorylase activity1.58E-04
18GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity1.58E-04
19GO:0042586: peptide deformylase activity1.58E-04
20GO:0004645: phosphorylase activity1.58E-04
21GO:0004476: mannose-6-phosphate isomerase activity1.58E-04
22GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors1.77E-04
23GO:0016798: hydrolase activity, acting on glycosyl bonds2.37E-04
24GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity3.60E-04
25GO:0008963: phospho-N-acetylmuramoyl-pentapeptide-transferase activity3.60E-04
26GO:0003852: 2-isopropylmalate synthase activity3.60E-04
27GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity5.89E-04
28GO:0003979: UDP-glucose 6-dehydrogenase activity5.89E-04
29GO:0051287: NAD binding6.58E-04
30GO:0052656: L-isoleucine transaminase activity8.43E-04
31GO:0052654: L-leucine transaminase activity8.43E-04
32GO:0052655: L-valine transaminase activity8.43E-04
33GO:0001872: (1->3)-beta-D-glucan binding8.43E-04
34GO:0030570: pectate lyase activity8.52E-04
35GO:0008810: cellulase activity8.52E-04
36GO:0004084: branched-chain-amino-acid transaminase activity1.12E-03
37GO:0052793: pectin acetylesterase activity1.12E-03
38GO:0052689: carboxylic ester hydrolase activity1.13E-03
39GO:0009922: fatty acid elongase activity1.41E-03
40GO:0004623: phospholipase A2 activity1.41E-03
41GO:0016829: lyase activity1.70E-03
42GO:0004784: superoxide dismutase activity1.74E-03
43GO:0003924: GTPase activity1.75E-03
44GO:0004747: ribokinase activity2.09E-03
45GO:0051753: mannan synthase activity2.09E-03
46GO:0008865: fructokinase activity2.84E-03
47GO:0052747: sinapyl alcohol dehydrogenase activity2.84E-03
48GO:0008289: lipid binding2.90E-03
49GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism3.67E-03
50GO:0016787: hydrolase activity3.75E-03
51GO:0009672: auxin:proton symporter activity4.12E-03
52GO:0016788: hydrolase activity, acting on ester bonds4.12E-03
53GO:0015020: glucuronosyltransferase activity4.58E-03
54GO:0047372: acylglycerol lipase activity5.05E-03
55GO:0045551: cinnamyl-alcohol dehydrogenase activity5.55E-03
56GO:0009982: pseudouridine synthase activity6.06E-03
57GO:0004565: beta-galactosidase activity6.06E-03
58GO:0010329: auxin efflux transmembrane transporter activity6.06E-03
59GO:0045735: nutrient reservoir activity6.82E-03
60GO:0004871: signal transducer activity7.04E-03
61GO:0005507: copper ion binding7.18E-03
62GO:0005525: GTP binding8.92E-03
63GO:0033612: receptor serine/threonine kinase binding9.46E-03
64GO:0009055: electron carrier activity9.47E-03
65GO:0008514: organic anion transmembrane transporter activity1.14E-02
66GO:0005102: receptor binding1.20E-02
67GO:0003713: transcription coactivator activity1.34E-02
68GO:0019901: protein kinase binding1.48E-02
69GO:0051015: actin filament binding1.71E-02
70GO:0016759: cellulose synthase activity1.78E-02
71GO:0016722: oxidoreductase activity, oxidizing metal ions1.86E-02
72GO:0008375: acetylglucosaminyltransferase activity2.19E-02
73GO:0030247: polysaccharide binding2.27E-02
74GO:0008757: S-adenosylmethionine-dependent methyltransferase activity2.36E-02
75GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity2.44E-02
76GO:0004712: protein serine/threonine/tyrosine kinase activity3.08E-02
77GO:0051539: 4 iron, 4 sulfur cluster binding3.17E-02
78GO:0051537: 2 iron, 2 sulfur cluster binding3.66E-02
79GO:0003777: microtubule motor activity4.60E-02
80GO:0015171: amino acid transmembrane transporter activity4.60E-02
81GO:0003824: catalytic activity4.83E-02
82GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups4.93E-02
RankGO TermAdjusted P value
1GO:0005835: fatty acid synthase complex0.00E+00
2GO:0005618: cell wall1.34E-10
3GO:0048046: apoplast6.55E-09
4GO:0046658: anchored component of plasma membrane3.44E-07
5GO:0005576: extracellular region2.29E-06
6GO:0045298: tubulin complex3.34E-06
7GO:0005886: plasma membrane4.59E-06
8GO:0031225: anchored component of membrane1.41E-05
9GO:0009923: fatty acid elongase complex1.58E-04
10GO:0005875: microtubule associated complex5.37E-04
11GO:0009506: plasmodesma6.11E-04
12GO:0009331: glycerol-3-phosphate dehydrogenase complex8.43E-04
13GO:0015630: microtubule cytoskeleton8.43E-04
14GO:0005874: microtubule9.27E-04
15GO:0009505: plant-type cell wall1.30E-03
16GO:0016020: membrane2.38E-03
17GO:0005578: proteinaceous extracellular matrix6.06E-03
18GO:0005773: vacuole7.97E-03
19GO:0031410: cytoplasmic vesicle1.01E-02
20GO:0015629: actin cytoskeleton1.07E-02
21GO:0009570: chloroplast stroma1.25E-02
22GO:0000139: Golgi membrane1.93E-02
23GO:0009534: chloroplast thylakoid2.28E-02
24GO:0005819: spindle3.08E-02
25GO:0005802: trans-Golgi network3.24E-02
26GO:0031977: thylakoid lumen3.27E-02
27GO:0005856: cytoskeleton3.76E-02
28GO:0005768: endosome3.79E-02
29GO:0005794: Golgi apparatus4.48E-02
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Gene type



Gene DE type