co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G29810

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0002376: immune system process	0.00E+00
2	GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance	0.00E+00
3	GO:0006983: ER overload response	0.00E+00
4	GO:0045792: negative regulation of cell size	0.00E+00
5	GO:0051553: flavone biosynthetic process	0.00E+00
6	GO:1900367: positive regulation of defense response to insect	0.00E+00
7	GO:0071327: cellular response to trehalose stimulus	0.00E+00
8	GO:0042742: defense response to bacterium	7.38E-08
9	GO:0009617: response to bacterium	9.76E-08
10	GO:0051707: response to other organism	3.54E-07
11	GO:0006457: protein folding	7.72E-07
12	GO:0010150: leaf senescence	8.95E-07
13	GO:0009816: defense response to bacterium, incompatible interaction	1.30E-06
14	GO:0034976: response to endoplasmic reticulum stress	1.42E-06
15	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	2.56E-06
16	GO:0031349: positive regulation of defense response	2.56E-06
17	GO:0009625: response to insect	4.24E-06
18	GO:0010200: response to chitin	8.90E-06
19	GO:0006952: defense response	1.64E-05
20	GO:0052544: defense response by callose deposition in cell wall	1.99E-05
21	GO:0009626: plant-type hypersensitive response	3.00E-05
22	GO:0009627: systemic acquired resistance	3.59E-05
23	GO:0000162: tryptophan biosynthetic process	5.46E-05
24	GO:0006468: protein phosphorylation	7.95E-05
25	GO:0009759: indole glucosinolate biosynthetic process	9.03E-05
26	GO:0010942: positive regulation of cell death	9.03E-05
27	GO:0046470: phosphatidylcholine metabolic process	1.64E-04
28	GO:0009751: response to salicylic acid	1.80E-04
29	GO:0010365: positive regulation of ethylene biosynthetic process	2.34E-04
30	GO:1901183: positive regulation of camalexin biosynthetic process	2.34E-04
31	GO:0060862: negative regulation of floral organ abscission	2.34E-04
32	GO:0009609: response to symbiotic bacterium	2.34E-04
33	GO:0010266: response to vitamin B1	2.34E-04
34	GO:0009700: indole phytoalexin biosynthetic process	2.34E-04
35	GO:0010230: alternative respiration	2.34E-04
36	GO:0006643: membrane lipid metabolic process	2.34E-04
37	GO:0000302: response to reactive oxygen species	2.41E-04
38	GO:2000031: regulation of salicylic acid mediated signaling pathway	2.59E-04
39	GO:0030968: endoplasmic reticulum unfolded protein response	2.59E-04
40	GO:0043069: negative regulation of programmed cell death	4.36E-04
41	GO:0009682: induced systemic resistance	5.04E-04
42	GO:0010618: aerenchyma formation	5.20E-04
43	GO:0043066: negative regulation of apoptotic process	5.20E-04
44	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	5.20E-04
45	GO:0010541: acropetal auxin transport	5.20E-04
46	GO:0009969: xyloglucan biosynthetic process	8.23E-04
47	GO:0055074: calcium ion homeostasis	8.44E-04
48	GO:1900140: regulation of seedling development	8.44E-04
49	GO:0048281: inflorescence morphogenesis	8.44E-04
50	GO:0048194: Golgi vesicle budding	1.20E-03
51	GO:0015696: ammonium transport	1.20E-03
52	GO:0002239: response to oomycetes	1.20E-03
53	GO:0043207: response to external biotic stimulus	1.20E-03
54	GO:0009399: nitrogen fixation	1.20E-03
55	GO:0000187: activation of MAPK activity	1.20E-03
56	GO:0015700: arsenite transport	1.20E-03
57	GO:0016998: cell wall macromolecule catabolic process	1.21E-03
58	GO:0031347: regulation of defense response	1.31E-03
59	GO:0030433: ubiquitin-dependent ERAD pathway	1.33E-03
60	GO:0009814: defense response, incompatible interaction	1.33E-03
61	GO:0060548: negative regulation of cell death	1.61E-03
62	GO:0048830: adventitious root development	1.61E-03
63	GO:0072488: ammonium transmembrane transport	1.61E-03
64	GO:0080142: regulation of salicylic acid biosynthetic process	1.61E-03
65	GO:0006542: glutamine biosynthetic process	1.61E-03
66	GO:0000413: protein peptidyl-prolyl isomerization	1.83E-03
67	GO:0010197: polar nucleus fusion	1.97E-03
68	GO:0010225: response to UV-C	2.05E-03
69	GO:0046283: anthocyanin-containing compound metabolic process	2.05E-03
70	GO:0031365: N-terminal protein amino acid modification	2.05E-03
71	GO:0009414: response to water deprivation	2.41E-03
72	GO:1900425: negative regulation of defense response to bacterium	2.52E-03
73	GO:0006979: response to oxidative stress	2.57E-03
74	GO:0010310: regulation of hydrogen peroxide metabolic process	3.03E-03
75	GO:0009612: response to mechanical stimulus	3.03E-03
76	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	3.03E-03
77	GO:0000911: cytokinesis by cell plate formation	3.03E-03
78	GO:2000037: regulation of stomatal complex patterning	3.03E-03
79	GO:0009610: response to symbiotic fungus	3.58E-03
80	GO:0043090: amino acid import	3.58E-03
81	GO:0071446: cellular response to salicylic acid stimulus	3.58E-03
82	GO:0010044: response to aluminum ion	3.58E-03
83	GO:0009737: response to abscisic acid	3.76E-03
84	GO:0016042: lipid catabolic process	3.92E-03
85	GO:0009787: regulation of abscisic acid-activated signaling pathway	4.15E-03
86	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	4.15E-03
87	GO:0009819: drought recovery	4.15E-03
88	GO:1900150: regulation of defense response to fungus	4.15E-03
89	GO:0010120: camalexin biosynthetic process	4.74E-03
90	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	4.74E-03
91	GO:0010204: defense response signaling pathway, resistance gene-independent	4.74E-03
92	GO:0010497: plasmodesmata-mediated intercellular transport	4.74E-03
93	GO:0043562: cellular response to nitrogen levels	4.74E-03
94	GO:0009813: flavonoid biosynthetic process	4.80E-03
95	GO:0048527: lateral root development	5.28E-03
96	GO:0015780: nucleotide-sugar transport	5.37E-03
97	GO:0046685: response to arsenic-containing substance	5.37E-03
98	GO:0010112: regulation of systemic acquired resistance	5.37E-03
99	GO:2000280: regulation of root development	6.03E-03
100	GO:1900426: positive regulation of defense response to bacterium	6.03E-03
101	GO:0010205: photoinhibition	6.03E-03
102	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	6.03E-03
103	GO:0046686: response to cadmium ion	6.06E-03
104	GO:0010215: cellulose microfibril organization	6.71E-03
105	GO:0006032: chitin catabolic process	6.71E-03
106	GO:0006995: cellular response to nitrogen starvation	6.71E-03
107	GO:0009641: shade avoidance	6.71E-03
108	GO:0042542: response to hydrogen peroxide	7.17E-03
109	GO:0000038: very long-chain fatty acid metabolic process	7.43E-03
110	GO:0009684: indoleacetic acid biosynthetic process	7.43E-03
111	GO:0050832: defense response to fungus	7.69E-03
112	GO:0000266: mitochondrial fission	8.17E-03
113	GO:0010105: negative regulation of ethylene-activated signaling pathway	8.17E-03
114	GO:0002213: defense response to insect	8.17E-03
115	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	8.17E-03
116	GO:0006508: proteolysis	8.27E-03
117	GO:0010075: regulation of meristem growth	8.93E-03
118	GO:0010229: inflorescence development	8.93E-03
119	GO:0009934: regulation of meristem structural organization	9.72E-03
120	GO:0009723: response to ethylene	9.82E-03
121	GO:0009651: response to salt stress	9.98E-03
122	GO:0070588: calcium ion transmembrane transport	1.05E-02
123	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.12E-02
124	GO:2000377: regulation of reactive oxygen species metabolic process	1.22E-02
125	GO:0009620: response to fungus	1.31E-02
126	GO:0010073: meristem maintenance	1.31E-02
127	GO:0045454: cell redox homeostasis	1.35E-02
128	GO:0009553: embryo sac development	1.40E-02
129	GO:0009409: response to cold	1.46E-02
130	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.50E-02
131	GO:0031348: negative regulation of defense response	1.50E-02
132	GO:0006012: galactose metabolic process	1.59E-02
133	GO:0010227: floral organ abscission	1.59E-02
134	GO:0009306: protein secretion	1.69E-02
135	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.79E-02
136	GO:0042147: retrograde transport, endosome to Golgi	1.79E-02
137	GO:0042631: cellular response to water deprivation	1.89E-02
138	GO:0009753: response to jasmonic acid	1.92E-02
139	GO:0048868: pollen tube development	1.99E-02
140	GO:0008360: regulation of cell shape	1.99E-02
141	GO:0009646: response to absence of light	2.10E-02
142	GO:0061025: membrane fusion	2.10E-02
143	GO:0006623: protein targeting to vacuole	2.20E-02
144	GO:0009851: auxin biosynthetic process	2.20E-02
145	GO:0010193: response to ozone	2.31E-02
146	GO:0006891: intra-Golgi vesicle-mediated transport	2.31E-02
147	GO:0002229: defense response to oomycetes	2.31E-02
148	GO:0009630: gravitropism	2.42E-02
149	GO:0016032: viral process	2.42E-02
150	GO:0019761: glucosinolate biosynthetic process	2.42E-02
151	GO:0030163: protein catabolic process	2.54E-02
152	GO:0009567: double fertilization forming a zygote and endosperm	2.65E-02
153	GO:0006904: vesicle docking involved in exocytosis	2.77E-02
154	GO:0007166: cell surface receptor signaling pathway	2.85E-02
155	GO:0051607: defense response to virus	2.89E-02
156	GO:0001666: response to hypoxia	3.01E-02
157	GO:0009735: response to cytokinin	3.23E-02
158	GO:0042128: nitrate assimilation	3.25E-02
159	GO:0016049: cell growth	3.50E-02
160	GO:0009817: defense response to fungus, incompatible interaction	3.63E-02
161	GO:0008219: cell death	3.63E-02
162	GO:0009832: plant-type cell wall biogenesis	3.76E-02
163	GO:0009407: toxin catabolic process	3.89E-02
164	GO:0015031: protein transport	3.99E-02
165	GO:0010119: regulation of stomatal movement	4.03E-02
166	GO:0006865: amino acid transport	4.16E-02
167	GO:0006099: tricarboxylic acid cycle	4.43E-02
168	GO:0080167: response to karrikin	4.76E-02
169	GO:0006887: exocytosis	4.85E-02
170	GO:0006810: transport	4.90E-02
171	GO:0016192: vesicle-mediated transport	5.00E-02

Rank	GO Term	Adjusted P value
1	GO:0005212: structural constituent of eye lens	0.00E+00
2	GO:0033759: flavone synthase activity	0.00E+00
3	GO:0015370: solute:sodium symporter activity	0.00E+00
4	GO:0052873: FMN reductase (NADPH) activity	0.00E+00
5	GO:0008752: FMN reductase activity	0.00E+00
6	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
7	GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor	0.00E+00
8	GO:0016301: kinase activity	9.57E-05
9	GO:0004012: phospholipid-translocating ATPase activity	1.24E-04
10	GO:0003756: protein disulfide isomerase activity	1.28E-04
11	GO:0004674: protein serine/threonine kinase activity	1.47E-04
12	GO:0004714: transmembrane receptor protein tyrosine kinase activity	2.09E-04
13	GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity	2.34E-04
14	GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity	2.34E-04
15	GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity	2.34E-04
16	GO:0004425: indole-3-glycerol-phosphate synthase activity	2.34E-04
17	GO:0033984: indole-3-glycerol-phosphate lyase activity	2.34E-04
18	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	2.34E-04
19	GO:0031127: alpha-(1,2)-fucosyltransferase activity	2.34E-04
20	GO:0004630: phospholipase D activity	2.59E-04
21	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	2.59E-04
22	GO:0051082: unfolded protein binding	3.65E-04
23	GO:0047364: desulfoglucosinolate sulfotransferase activity	5.20E-04
24	GO:0015105: arsenite transmembrane transporter activity	5.20E-04
25	GO:0005509: calcium ion binding	6.03E-04
26	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	6.54E-04
27	GO:0005524: ATP binding	7.22E-04
28	GO:0004190: aspartic-type endopeptidase activity	8.23E-04
29	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	8.44E-04
30	GO:0005460: UDP-glucose transmembrane transporter activity	1.20E-03
31	GO:0035529: NADH pyrophosphatase activity	1.20E-03
32	GO:0004834: tryptophan synthase activity	1.61E-03
33	GO:0009044: xylan 1,4-beta-xylosidase activity	1.61E-03
34	GO:0015204: urea transmembrane transporter activity	1.61E-03
35	GO:0045431: flavonol synthase activity	2.05E-03
36	GO:0005459: UDP-galactose transmembrane transporter activity	2.05E-03
37	GO:0047631: ADP-ribose diphosphatase activity	2.05E-03
38	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	2.05E-03
39	GO:0004356: glutamate-ammonia ligase activity	2.05E-03
40	GO:0016853: isomerase activity	2.12E-03
41	GO:0005506: iron ion binding	2.45E-03
42	GO:0030976: thiamine pyrophosphate binding	2.52E-03
43	GO:0000210: NAD+ diphosphatase activity	2.52E-03
44	GO:0008519: ammonium transmembrane transporter activity	2.52E-03
45	GO:0004656: procollagen-proline 4-dioxygenase activity	3.03E-03
46	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	3.35E-03
47	GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity	3.58E-03
48	GO:0008235: metalloexopeptidase activity	3.58E-03
49	GO:0004683: calmodulin-dependent protein kinase activity	4.13E-03
50	GO:0004034: aldose 1-epimerase activity	4.15E-03
51	GO:0004708: MAP kinase kinase activity	4.15E-03
52	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.28E-03
53	GO:0019825: oxygen binding	4.68E-03
54	GO:0003843: 1,3-beta-D-glucan synthase activity	4.74E-03
55	GO:0008417: fucosyltransferase activity	5.37E-03
56	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	5.79E-03
57	GO:0004568: chitinase activity	6.71E-03
58	GO:0004713: protein tyrosine kinase activity	6.71E-03
59	GO:0004177: aminopeptidase activity	7.43E-03
60	GO:0015293: symporter activity	8.39E-03
61	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	8.71E-03
62	GO:0005262: calcium channel activity	8.93E-03
63	GO:0005388: calcium-transporting ATPase activity	8.93E-03
64	GO:0031072: heat shock protein binding	8.93E-03
65	GO:0016298: lipase activity	1.04E-02
66	GO:0008061: chitin binding	1.05E-02
67	GO:0003712: transcription cofactor activity	1.05E-02
68	GO:0008146: sulfotransferase activity	1.05E-02
69	GO:0015171: amino acid transmembrane transporter activity	1.12E-02
70	GO:0031625: ubiquitin protein ligase binding	1.12E-02
71	GO:0031418: L-ascorbic acid binding	1.22E-02
72	GO:0033612: receptor serine/threonine kinase binding	1.40E-02
73	GO:0016746: transferase activity, transferring acyl groups	1.48E-02
74	GO:0008810: cellulase activity	1.59E-02
75	GO:0004672: protein kinase activity	1.68E-02
76	GO:0005516: calmodulin binding	1.81E-02
77	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.85E-02
78	GO:0020037: heme binding	1.90E-02
79	GO:0005525: GTP binding	2.07E-02
80	GO:0010181: FMN binding	2.10E-02
81	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.77E-02
82	GO:0016722: oxidoreductase activity, oxidizing metal ions	2.77E-02
83	GO:0015250: water channel activity	3.01E-02
84	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	3.16E-02
85	GO:0009931: calcium-dependent protein serine/threonine kinase activity	3.25E-02
86	GO:0030247: polysaccharide binding	3.38E-02
87	GO:0004806: triglyceride lipase activity	3.38E-02
88	GO:0000287: magnesium ion binding	3.78E-02
89	GO:0004222: metalloendopeptidase activity	3.89E-02
90	GO:0030145: manganese ion binding	4.03E-02
91	GO:0050897: cobalt ion binding	4.03E-02
92	GO:0003746: translation elongation factor activity	4.30E-02
93	GO:0000987: core promoter proximal region sequence-specific DNA binding	4.43E-02
94	GO:0008422: beta-glucosidase activity	4.57E-02
95	GO:0004497: monooxygenase activity	4.76E-02
96	GO:0004364: glutathione transferase activity	5.00E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	6.30E-13
2	GO:0005788: endoplasmic reticulum lumen	3.64E-08
3	GO:0016021: integral component of membrane	2.85E-07
4	GO:0005774: vacuolar membrane	3.57E-05
5	GO:0005783: endoplasmic reticulum	1.71E-04
6	GO:0005618: cell wall	2.29E-04
7	GO:0045252: oxoglutarate dehydrogenase complex	2.34E-04
8	GO:0005901: caveola	5.20E-04
9	GO:0005789: endoplasmic reticulum membrane	5.52E-04
10	GO:0009506: plasmodesma	6.57E-04
11	GO:0070062: extracellular exosome	1.20E-03
12	GO:0030658: transport vesicle membrane	1.20E-03
13	GO:0009504: cell plate	2.27E-03
14	GO:0000148: 1,3-beta-D-glucan synthase complex	4.74E-03
15	GO:0016020: membrane	5.32E-03
16	GO:0031225: anchored component of membrane	5.49E-03
17	GO:0030665: clathrin-coated vesicle membrane	6.03E-03
18	GO:0005887: integral component of plasma membrane	6.52E-03
19	GO:0046658: anchored component of plasma membrane	6.68E-03
20	GO:0017119: Golgi transport complex	6.71E-03
21	GO:0005578: proteinaceous extracellular matrix	8.93E-03
22	GO:0031012: extracellular matrix	8.93E-03
23	GO:0030176: integral component of endoplasmic reticulum membrane	1.05E-02
24	GO:0048046: apoplast	1.18E-02
25	GO:0005829: cytosol	1.45E-02
26	GO:0005794: Golgi apparatus	1.91E-02
27	GO:0000145: exocyst	2.42E-02
28	GO:0016592: mediator complex	2.42E-02
29	GO:0032580: Golgi cisterna membrane	2.65E-02
30	GO:0000151: ubiquitin ligase complex	3.63E-02
31	GO:0009505: plant-type cell wall	3.91E-02
32	GO:0005576: extracellular region	4.80E-02
33	GO:0031902: late endosome membrane	4.85E-02