GO Enrichment Analysis of Co-expressed Genes with
AT4G28210
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0002103: endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 2 | GO:0090071: negative regulation of ribosome biogenesis | 0.00E+00 |
| 3 | GO:0015742: alpha-ketoglutarate transport | 0.00E+00 |
| 4 | GO:0080094: response to trehalose-6-phosphate | 0.00E+00 |
| 5 | GO:0051085: chaperone mediated protein folding requiring cofactor | 2.44E-07 |
| 6 | GO:0042026: protein refolding | 1.91E-06 |
| 7 | GO:0006169: adenosine salvage | 1.77E-05 |
| 8 | GO:0006436: tryptophanyl-tRNA aminoacylation | 1.77E-05 |
| 9 | GO:0006418: tRNA aminoacylation for protein translation | 3.11E-05 |
| 10 | GO:0007005: mitochondrion organization | 3.88E-05 |
| 11 | GO:2000071: regulation of defense response by callose deposition | 4.61E-05 |
| 12 | GO:0051604: protein maturation | 8.18E-05 |
| 13 | GO:0006986: response to unfolded protein | 1.23E-04 |
| 14 | GO:0006571: tyrosine biosynthetic process | 1.23E-04 |
| 15 | GO:0015729: oxaloacetate transport | 1.23E-04 |
| 16 | GO:0019676: ammonia assimilation cycle | 1.69E-04 |
| 17 | GO:0015743: malate transport | 1.69E-04 |
| 18 | GO:0044209: AMP salvage | 2.19E-04 |
| 19 | GO:0071423: malate transmembrane transport | 2.19E-04 |
| 20 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 2.72E-04 |
| 21 | GO:1901259: chloroplast rRNA processing | 3.27E-04 |
| 22 | GO:0006458: 'de novo' protein folding | 3.27E-04 |
| 23 | GO:0017148: negative regulation of translation | 3.27E-04 |
| 24 | GO:0052543: callose deposition in cell wall | 4.43E-04 |
| 25 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 4.43E-04 |
| 26 | GO:0019430: removal of superoxide radicals | 5.05E-04 |
| 27 | GO:0009657: plastid organization | 5.05E-04 |
| 28 | GO:1900865: chloroplast RNA modification | 6.32E-04 |
| 29 | GO:0031425: chloroplast RNA processing | 6.32E-04 |
| 30 | GO:0006457: protein folding | 6.66E-04 |
| 31 | GO:0045036: protein targeting to chloroplast | 6.99E-04 |
| 32 | GO:0009682: induced systemic resistance | 7.68E-04 |
| 33 | GO:0010020: chloroplast fission | 9.82E-04 |
| 34 | GO:0061077: chaperone-mediated protein folding | 1.37E-03 |
| 35 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 1.46E-03 |
| 36 | GO:0010118: stomatal movement | 1.81E-03 |
| 37 | GO:0006814: sodium ion transport | 2.00E-03 |
| 38 | GO:0002229: defense response to oomycetes | 2.19E-03 |
| 39 | GO:0016032: viral process | 2.29E-03 |
| 40 | GO:0010027: thylakoid membrane organization | 2.80E-03 |
| 41 | GO:0009627: systemic acquired resistance | 3.02E-03 |
| 42 | GO:0048481: plant ovule development | 3.36E-03 |
| 43 | GO:0008219: cell death | 3.36E-03 |
| 44 | GO:0006499: N-terminal protein myristoylation | 3.59E-03 |
| 45 | GO:0009735: response to cytokinin | 3.76E-03 |
| 46 | GO:0009867: jasmonic acid mediated signaling pathway | 3.94E-03 |
| 47 | GO:0031347: regulation of defense response | 5.34E-03 |
| 48 | GO:0006096: glycolytic process | 6.45E-03 |
| 49 | GO:0009620: response to fungus | 6.89E-03 |
| 50 | GO:0009624: response to nematode | 7.34E-03 |
| 51 | GO:0009790: embryo development | 9.56E-03 |
| 52 | GO:0006633: fatty acid biosynthetic process | 1.01E-02 |
| 53 | GO:0006397: mRNA processing | 2.32E-02 |
| 54 | GO:0055114: oxidation-reduction process | 2.66E-02 |
| 55 | GO:0009738: abscisic acid-activated signaling pathway | 3.31E-02 |
| 56 | GO:0055085: transmembrane transport | 4.01E-02 |
| 57 | GO:0006414: translational elongation | 4.50E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015139: alpha-ketoglutarate transmembrane transporter activity | 0.00E+00 |
| 2 | GO:0044183: protein binding involved in protein folding | 1.12E-05 |
| 3 | GO:0004001: adenosine kinase activity | 1.77E-05 |
| 4 | GO:0033730: arogenate dehydrogenase (NADP+) activity | 1.77E-05 |
| 5 | GO:0004830: tryptophan-tRNA ligase activity | 1.77E-05 |
| 6 | GO:0004665: prephenate dehydrogenase (NADP+) activity | 1.77E-05 |
| 7 | GO:0008977: prephenate dehydrogenase (NAD+) activity | 1.77E-05 |
| 8 | GO:0051082: unfolded protein binding | 2.14E-05 |
| 9 | GO:0051087: chaperone binding | 3.11E-05 |
| 10 | GO:0015367: oxoglutarate:malate antiporter activity | 4.61E-05 |
| 11 | GO:0004312: fatty acid synthase activity | 4.61E-05 |
| 12 | GO:0004812: aminoacyl-tRNA ligase activity | 5.23E-05 |
| 13 | GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity | 8.18E-05 |
| 14 | GO:0015131: oxaloacetate transmembrane transporter activity | 1.23E-04 |
| 15 | GO:0043023: ribosomal large subunit binding | 1.23E-04 |
| 16 | GO:0001872: (1->3)-beta-D-glucan binding | 1.23E-04 |
| 17 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 1.23E-04 |
| 18 | GO:0004784: superoxide dismutase activity | 2.72E-04 |
| 19 | GO:0015140: malate transmembrane transporter activity | 3.84E-04 |
| 20 | GO:0005507: copper ion binding | 7.51E-04 |
| 21 | GO:0000049: tRNA binding | 8.38E-04 |
| 22 | GO:0042803: protein homodimerization activity | 1.99E-03 |
| 23 | GO:0030247: polysaccharide binding | 3.13E-03 |
| 24 | GO:0008236: serine-type peptidase activity | 3.24E-03 |
| 25 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 3.36E-03 |
| 26 | GO:0003746: translation elongation factor activity | 3.94E-03 |
| 27 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 6.60E-03 |
| 28 | GO:0003729: mRNA binding | 1.24E-02 |
| 29 | GO:0042802: identical protein binding | 1.27E-02 |
| 30 | GO:0004601: peroxidase activity | 1.46E-02 |
| 31 | GO:0008233: peptidase activity | 1.68E-02 |
| 32 | GO:0003924: GTPase activity | 2.25E-02 |
| 33 | GO:0005515: protein binding | 2.62E-02 |
| 34 | GO:0016887: ATPase activity | 3.07E-02 |
| 35 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 4.13E-02 |
| 36 | GO:0005524: ATP binding | 4.27E-02 |
| 37 | GO:0005525: GTP binding | 4.83E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 1.86E-24 |
| 2 | GO:0009570: chloroplast stroma | 2.54E-15 |
| 3 | GO:0009941: chloroplast envelope | 1.10E-14 |
| 4 | GO:0042646: plastid nucleoid | 1.23E-04 |
| 5 | GO:0009526: plastid envelope | 1.69E-04 |
| 6 | GO:0009536: plastid | 1.98E-04 |
| 7 | GO:0055035: plastid thylakoid membrane | 2.19E-04 |
| 8 | GO:0022626: cytosolic ribosome | 4.57E-04 |
| 9 | GO:0009706: chloroplast inner membrane | 5.10E-04 |
| 10 | GO:0042644: chloroplast nucleoid | 5.68E-04 |
| 11 | GO:0009579: thylakoid | 6.04E-04 |
| 12 | GO:0009534: chloroplast thylakoid | 6.12E-04 |
| 13 | GO:0005759: mitochondrial matrix | 7.87E-04 |
| 14 | GO:0016020: membrane | 1.86E-03 |
| 15 | GO:0010319: stromule | 2.60E-03 |
| 16 | GO:0009295: nucleoid | 2.60E-03 |
| 17 | GO:0030529: intracellular ribonucleoprotein complex | 2.80E-03 |
| 18 | GO:0009707: chloroplast outer membrane | 3.36E-03 |
| 19 | GO:0005623: cell | 8.74E-03 |
| 20 | GO:0005739: mitochondrion | 1.03E-02 |
| 21 | GO:0046658: anchored component of plasma membrane | 1.31E-02 |
| 22 | GO:0009535: chloroplast thylakoid membrane | 1.87E-02 |
| 23 | GO:0048046: apoplast | 3.04E-02 |
| 24 | GO:0031225: anchored component of membrane | 4.65E-02 |