GO Enrichment Analysis of Co-expressed Genes with
AT4G26690
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 2 | GO:0097164: ammonium ion metabolic process | 0.00E+00 |
| 3 | GO:0032544: plastid translation | 3.55E-07 |
| 4 | GO:0042335: cuticle development | 1.34E-05 |
| 5 | GO:0006783: heme biosynthetic process | 5.45E-05 |
| 6 | GO:0046520: sphingoid biosynthetic process | 7.23E-05 |
| 7 | GO:0006782: protoporphyrinogen IX biosynthetic process | 7.98E-05 |
| 8 | GO:0000038: very long-chain fatty acid metabolic process | 9.43E-05 |
| 9 | GO:0070981: L-asparagine biosynthetic process | 1.74E-04 |
| 10 | GO:0006529: asparagine biosynthetic process | 1.74E-04 |
| 11 | GO:0006412: translation | 1.80E-04 |
| 12 | GO:0015840: urea transport | 2.93E-04 |
| 13 | GO:0015714: phosphoenolpyruvate transport | 2.93E-04 |
| 14 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 4.23E-04 |
| 15 | GO:2001141: regulation of RNA biosynthetic process | 4.23E-04 |
| 16 | GO:0006633: fatty acid biosynthetic process | 5.47E-04 |
| 17 | GO:0015713: phosphoglycerate transport | 5.65E-04 |
| 18 | GO:0015995: chlorophyll biosynthetic process | 8.59E-04 |
| 19 | GO:0009972: cytidine deamination | 8.73E-04 |
| 20 | GO:0007035: vacuolar acidification | 8.73E-04 |
| 21 | GO:0009854: oxidative photosynthetic carbon pathway | 1.04E-03 |
| 22 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 1.04E-03 |
| 23 | GO:0009955: adaxial/abaxial pattern specification | 1.04E-03 |
| 24 | GO:1901259: chloroplast rRNA processing | 1.04E-03 |
| 25 | GO:0010444: guard mother cell differentiation | 1.21E-03 |
| 26 | GO:0030497: fatty acid elongation | 1.21E-03 |
| 27 | GO:0008610: lipid biosynthetic process | 1.40E-03 |
| 28 | GO:0009932: cell tip growth | 1.59E-03 |
| 29 | GO:0071482: cellular response to light stimulus | 1.59E-03 |
| 30 | GO:0008643: carbohydrate transport | 1.63E-03 |
| 31 | GO:0045454: cell redox homeostasis | 1.72E-03 |
| 32 | GO:0009245: lipid A biosynthetic process | 1.80E-03 |
| 33 | GO:0006779: porphyrin-containing compound biosynthetic process | 2.01E-03 |
| 34 | GO:0006535: cysteine biosynthetic process from serine | 2.23E-03 |
| 35 | GO:0006352: DNA-templated transcription, initiation | 2.46E-03 |
| 36 | GO:0030148: sphingolipid biosynthetic process | 2.46E-03 |
| 37 | GO:0050826: response to freezing | 2.94E-03 |
| 38 | GO:0009725: response to hormone | 2.94E-03 |
| 39 | GO:0010207: photosystem II assembly | 3.19E-03 |
| 40 | GO:0006541: glutamine metabolic process | 3.19E-03 |
| 41 | GO:0010025: wax biosynthetic process | 3.71E-03 |
| 42 | GO:0006833: water transport | 3.71E-03 |
| 43 | GO:0019762: glucosinolate catabolic process | 3.71E-03 |
| 44 | GO:0006487: protein N-linked glycosylation | 3.98E-03 |
| 45 | GO:0019344: cysteine biosynthetic process | 3.98E-03 |
| 46 | GO:0009735: response to cytokinin | 4.14E-03 |
| 47 | GO:0015992: proton transport | 4.54E-03 |
| 48 | GO:0061077: chaperone-mediated protein folding | 4.54E-03 |
| 49 | GO:0055114: oxidation-reduction process | 5.11E-03 |
| 50 | GO:0019722: calcium-mediated signaling | 5.43E-03 |
| 51 | GO:0070417: cellular response to cold | 5.74E-03 |
| 52 | GO:0009646: response to absence of light | 6.70E-03 |
| 53 | GO:0009658: chloroplast organization | 7.59E-03 |
| 54 | GO:0042254: ribosome biogenesis | 7.73E-03 |
| 55 | GO:1901657: glycosyl compound metabolic process | 8.07E-03 |
| 56 | GO:0009567: double fertilization forming a zygote and endosperm | 8.43E-03 |
| 57 | GO:0007267: cell-cell signaling | 8.79E-03 |
| 58 | GO:0016126: sterol biosynthetic process | 9.54E-03 |
| 59 | GO:0009627: systemic acquired resistance | 1.03E-02 |
| 60 | GO:0015979: photosynthesis | 1.08E-02 |
| 61 | GO:0009637: response to blue light | 1.36E-02 |
| 62 | GO:0009853: photorespiration | 1.36E-02 |
| 63 | GO:0010114: response to red light | 1.63E-02 |
| 64 | GO:0009640: photomorphogenesis | 1.63E-02 |
| 65 | GO:0042538: hyperosmotic salinity response | 1.91E-02 |
| 66 | GO:0005975: carbohydrate metabolic process | 1.93E-02 |
| 67 | GO:0046686: response to cadmium ion | 1.99E-02 |
| 68 | GO:0009740: gibberellic acid mediated signaling pathway | 2.47E-02 |
| 69 | GO:0009416: response to light stimulus | 2.48E-02 |
| 70 | GO:0051726: regulation of cell cycle | 2.69E-02 |
| 71 | GO:0042744: hydrogen peroxide catabolic process | 3.32E-02 |
| 72 | GO:0006413: translational initiation | 3.63E-02 |
| 73 | GO:0040008: regulation of growth | 3.69E-02 |
| 74 | GO:0009739: response to gibberellin | 4.13E-02 |
| 75 | GO:0008380: RNA splicing | 4.32E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008887: glycerate kinase activity | 0.00E+00 |
| 2 | GO:0052631: sphingolipid delta-8 desaturase activity | 7.23E-05 |
| 3 | GO:0015200: methylammonium transmembrane transporter activity | 7.23E-05 |
| 4 | GO:0000170: sphingosine hydroxylase activity | 7.23E-05 |
| 5 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 7.23E-05 |
| 6 | GO:0015121: phosphoenolpyruvate:phosphate antiporter activity | 7.23E-05 |
| 7 | GO:0004655: porphobilinogen synthase activity | 7.23E-05 |
| 8 | GO:0004071: aspartate-ammonia ligase activity | 7.23E-05 |
| 9 | GO:0004853: uroporphyrinogen decarboxylase activity | 7.23E-05 |
| 10 | GO:0008825: cyclopropane-fatty-acyl-phospholipid synthase activity | 1.74E-04 |
| 11 | GO:0042284: sphingolipid delta-4 desaturase activity | 1.74E-04 |
| 12 | GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity | 1.74E-04 |
| 13 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 1.85E-04 |
| 14 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 1.85E-04 |
| 15 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 1.85E-04 |
| 16 | GO:0005528: FK506 binding | 2.07E-04 |
| 17 | GO:0004148: dihydrolipoyl dehydrogenase activity | 2.93E-04 |
| 18 | GO:0003735: structural constituent of ribosome | 3.79E-04 |
| 19 | GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity | 4.23E-04 |
| 20 | GO:0015204: urea transmembrane transporter activity | 5.65E-04 |
| 21 | GO:0015120: phosphoglycerate transmembrane transporter activity | 5.65E-04 |
| 22 | GO:0001053: plastid sigma factor activity | 5.65E-04 |
| 23 | GO:0004045: aminoacyl-tRNA hydrolase activity | 5.65E-04 |
| 24 | GO:0016987: sigma factor activity | 5.65E-04 |
| 25 | GO:0004506: squalene monooxygenase activity | 5.65E-04 |
| 26 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 6.57E-04 |
| 27 | GO:0009922: fatty acid elongase activity | 7.14E-04 |
| 28 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 7.14E-04 |
| 29 | GO:0004040: amidase activity | 7.14E-04 |
| 30 | GO:0016491: oxidoreductase activity | 8.03E-04 |
| 31 | GO:0102483: scopolin beta-glucosidase activity | 8.59E-04 |
| 32 | GO:0031177: phosphopantetheine binding | 8.73E-04 |
| 33 | GO:0008519: ammonium transmembrane transporter activity | 8.73E-04 |
| 34 | GO:0000035: acyl binding | 1.04E-03 |
| 35 | GO:0004124: cysteine synthase activity | 1.04E-03 |
| 36 | GO:0004126: cytidine deaminase activity | 1.04E-03 |
| 37 | GO:0008422: beta-glucosidase activity | 1.29E-03 |
| 38 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 1.40E-03 |
| 39 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.63E-03 |
| 40 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.76E-03 |
| 41 | GO:0009055: electron carrier activity | 2.45E-03 |
| 42 | GO:0046961: proton-transporting ATPase activity, rotational mechanism | 2.46E-03 |
| 43 | GO:0008794: arsenate reductase (glutaredoxin) activity | 2.46E-03 |
| 44 | GO:0004650: polygalacturonase activity | 2.62E-03 |
| 45 | GO:0015035: protein disulfide oxidoreductase activity | 2.94E-03 |
| 46 | GO:0051119: sugar transmembrane transporter activity | 3.44E-03 |
| 47 | GO:0019843: rRNA binding | 3.57E-03 |
| 48 | GO:0008514: organic anion transmembrane transporter activity | 5.43E-03 |
| 49 | GO:0010181: FMN binding | 6.70E-03 |
| 50 | GO:0019901: protein kinase binding | 7.04E-03 |
| 51 | GO:0005507: copper ion binding | 7.25E-03 |
| 52 | GO:0016597: amino acid binding | 9.16E-03 |
| 53 | GO:0015250: water channel activity | 9.54E-03 |
| 54 | GO:0008375: acetylglucosaminyltransferase activity | 1.03E-02 |
| 55 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 1.23E-02 |
| 56 | GO:0003993: acid phosphatase activity | 1.40E-02 |
| 57 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.01E-02 |
| 58 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 2.31E-02 |
| 59 | GO:0016746: transferase activity, transferring acyl groups | 2.64E-02 |
| 60 | GO:0016740: transferase activity | 3.02E-02 |
| 61 | GO:0030170: pyridoxal phosphate binding | 3.26E-02 |
| 62 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 3.27E-02 |
| 63 | GO:0015144: carbohydrate transmembrane transporter activity | 3.44E-02 |
| 64 | GO:0015297: antiporter activity | 3.69E-02 |
| 65 | GO:0005351: sugar:proton symporter activity | 3.75E-02 |
| 66 | GO:0003743: translation initiation factor activity | 4.26E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044391: ribosomal subunit | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 2.66E-10 |
| 3 | GO:0009570: chloroplast stroma | 2.16E-08 |
| 4 | GO:0031977: thylakoid lumen | 4.21E-06 |
| 5 | GO:0005840: ribosome | 1.02E-05 |
| 6 | GO:0009941: chloroplast envelope | 2.41E-05 |
| 7 | GO:0009543: chloroplast thylakoid lumen | 3.07E-05 |
| 8 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 7.23E-05 |
| 9 | GO:0009505: plant-type cell wall | 1.37E-04 |
| 10 | GO:0009579: thylakoid | 1.84E-04 |
| 11 | GO:0009509: chromoplast | 2.93E-04 |
| 12 | GO:0031225: anchored component of membrane | 3.07E-04 |
| 13 | GO:0048046: apoplast | 3.19E-04 |
| 14 | GO:0042646: plastid nucleoid | 4.23E-04 |
| 15 | GO:0000220: vacuolar proton-transporting V-type ATPase, V0 domain | 7.14E-04 |
| 16 | GO:0046658: anchored component of plasma membrane | 8.71E-04 |
| 17 | GO:0016363: nuclear matrix | 1.04E-03 |
| 18 | GO:0009534: chloroplast thylakoid | 1.10E-03 |
| 19 | GO:0042807: central vacuole | 1.21E-03 |
| 20 | GO:0000326: protein storage vacuole | 1.59E-03 |
| 21 | GO:0005763: mitochondrial small ribosomal subunit | 1.80E-03 |
| 22 | GO:0000311: plastid large ribosomal subunit | 2.70E-03 |
| 23 | GO:0030095: chloroplast photosystem II | 3.19E-03 |
| 24 | GO:0009654: photosystem II oxygen evolving complex | 4.26E-03 |
| 25 | GO:0019898: extrinsic component of membrane | 7.04E-03 |
| 26 | GO:0005576: extracellular region | 7.26E-03 |
| 27 | GO:0009535: chloroplast thylakoid membrane | 8.18E-03 |
| 28 | GO:0005773: vacuole | 9.13E-03 |
| 29 | GO:0030529: intracellular ribonucleoprotein complex | 9.54E-03 |
| 30 | GO:0015934: large ribosomal subunit | 1.27E-02 |
| 31 | GO:0009506: plasmodesma | 1.58E-02 |
| 32 | GO:0005887: integral component of plasma membrane | 1.89E-02 |
| 33 | GO:0005618: cell wall | 1.93E-02 |
| 34 | GO:0005789: endoplasmic reticulum membrane | 1.94E-02 |
| 35 | GO:0009705: plant-type vacuole membrane | 3.81E-02 |
| 36 | GO:0005802: trans-Golgi network | 3.96E-02 |
| 37 | GO:0005783: endoplasmic reticulum | 4.42E-02 |
| 38 | GO:0016020: membrane | 4.46E-02 |
| 39 | GO:0005768: endosome | 4.49E-02 |