co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G26620

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032780: negative regulation of ATPase activity	0.00E+00
2	GO:0010111: glyoxysome organization	0.00E+00
3	GO:0006605: protein targeting	1.84E-05
4	GO:0006144: purine nucleobase metabolic process	4.88E-05
5	GO:0010201: response to continuous far red light stimulus by the high-irradiance response system	4.88E-05
6	GO:1903648: positive regulation of chlorophyll catabolic process	4.88E-05
7	GO:0048508: embryonic meristem development	4.88E-05
8	GO:0019628: urate catabolic process	4.88E-05
9	GO:0080173: male-female gamete recognition during double fertilization	4.88E-05
10	GO:0034214: protein hexamerization	4.88E-05
11	GO:0007031: peroxisome organization	9.42E-05
12	GO:0019483: beta-alanine biosynthetic process	1.20E-04
13	GO:0009156: ribonucleoside monophosphate biosynthetic process	1.20E-04
14	GO:0019395: fatty acid oxidation	1.20E-04
15	GO:0031648: protein destabilization	1.20E-04
16	GO:1905182: positive regulation of urease activity	1.20E-04
17	GO:0019521: D-gluconate metabolic process	1.20E-04
18	GO:0006212: uracil catabolic process	1.20E-04
19	GO:0009945: radial axis specification	1.20E-04
20	GO:1900055: regulation of leaf senescence	2.06E-04
21	GO:0010359: regulation of anion channel activity	2.06E-04
22	GO:0080055: low-affinity nitrate transport	2.06E-04
23	GO:0010476: gibberellin mediated signaling pathway	2.06E-04
24	GO:0010325: raffinose family oligosaccharide biosynthetic process	2.06E-04
25	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	2.14E-04
26	GO:0071786: endoplasmic reticulum tubular network organization	3.01E-04
27	GO:0006624: vacuolar protein processing	3.01E-04
28	GO:2001289: lipid X metabolic process	3.01E-04
29	GO:0009738: abscisic acid-activated signaling pathway	3.58E-04
30	GO:0006878: cellular copper ion homeostasis	4.04E-04
31	GO:0009165: nucleotide biosynthetic process	4.04E-04
32	GO:0009939: positive regulation of gibberellic acid mediated signaling pathway	4.04E-04
33	GO:1902456: regulation of stomatal opening	6.29E-04
34	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	6.29E-04
35	GO:0010358: leaf shaping	6.29E-04
36	GO:0010119: regulation of stomatal movement	6.67E-04
37	GO:0009942: longitudinal axis specification	7.50E-04
38	GO:0048444: floral organ morphogenesis	7.50E-04
39	GO:1900057: positive regulation of leaf senescence	8.75E-04
40	GO:0006333: chromatin assembly or disassembly	8.75E-04
41	GO:0010161: red light signaling pathway	8.75E-04
42	GO:0009610: response to symbiotic fungus	8.75E-04
43	GO:0006955: immune response	8.75E-04
44	GO:0046470: phosphatidylcholine metabolic process	8.75E-04
45	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	8.75E-04
46	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	8.75E-04
47	GO:0016559: peroxisome fission	1.01E-03
48	GO:0043562: cellular response to nitrogen levels	1.14E-03
49	GO:0051603: proteolysis involved in cellular protein catabolic process	1.27E-03
50	GO:0000373: Group II intron splicing	1.28E-03
51	GO:0009056: catabolic process	1.28E-03
52	GO:0006098: pentose-phosphate shunt	1.28E-03
53	GO:0019538: protein metabolic process	1.59E-03
54	GO:0043085: positive regulation of catalytic activity	1.75E-03
55	GO:0015706: nitrate transport	1.91E-03
56	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	2.08E-03
57	GO:0006807: nitrogen compound metabolic process	2.08E-03
58	GO:0034976: response to endoplasmic reticulum stress	2.62E-03
59	GO:2000377: regulation of reactive oxygen species metabolic process	2.81E-03
60	GO:0009116: nucleoside metabolic process	2.81E-03
61	GO:0010150: leaf senescence	2.96E-03
62	GO:0009695: jasmonic acid biosynthetic process	3.01E-03
63	GO:0031408: oxylipin biosynthetic process	3.20E-03
64	GO:0030433: ubiquitin-dependent ERAD pathway	3.41E-03
65	GO:0031348: negative regulation of defense response	3.41E-03
66	GO:0009737: response to abscisic acid	3.45E-03
67	GO:0010197: polar nucleus fusion	4.48E-03
68	GO:0006623: protein targeting to vacuole	4.94E-03
69	GO:0006635: fatty acid beta-oxidation	5.18E-03
70	GO:0009723: response to ethylene	5.26E-03
71	GO:0010583: response to cyclopentenone	5.42E-03
72	GO:0030163: protein catabolic process	5.66E-03
73	GO:0006464: cellular protein modification process	5.91E-03
74	GO:0006508: proteolysis	6.00E-03
75	GO:0042128: nitrate assimilation	7.20E-03
76	GO:0006950: response to stress	7.48E-03
77	GO:0007568: aging	8.88E-03
78	GO:0009910: negative regulation of flower development	8.88E-03
79	GO:0046686: response to cadmium ion	1.03E-02
80	GO:0055114: oxidation-reduction process	1.06E-02
81	GO:0006631: fatty acid metabolic process	1.07E-02
82	GO:0000209: protein polyubiquitination	1.16E-02
83	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	1.30E-02
84	GO:0009846: pollen germination	1.33E-02
85	GO:0009809: lignin biosynthetic process	1.40E-02
86	GO:0006857: oligopeptide transport	1.47E-02
87	GO:0009611: response to wounding	1.51E-02
88	GO:0009626: plant-type hypersensitive response	1.65E-02
89	GO:0018105: peptidyl-serine phosphorylation	1.83E-02
90	GO:0006511: ubiquitin-dependent protein catabolic process	2.01E-02
91	GO:0009845: seed germination	2.23E-02
92	GO:0009651: response to salt stress	2.72E-02
93	GO:0009739: response to gibberellin	2.87E-02
94	GO:0006470: protein dephosphorylation	2.91E-02
95	GO:0010468: regulation of gene expression	3.00E-02
96	GO:0009658: chloroplast organization	3.61E-02
97	GO:0006970: response to osmotic stress	3.81E-02
98	GO:0009860: pollen tube growth	3.81E-02
99	GO:0007049: cell cycle	3.91E-02
100	GO:0009409: response to cold	4.05E-02
101	GO:0010200: response to chitin	4.31E-02
102	GO:0046777: protein autophosphorylation	4.41E-02
103	GO:0015979: photosynthesis	4.62E-02
104	GO:0006886: intracellular protein transport	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0042030: ATPase inhibitor activity	0.00E+00
2	GO:0017113: dihydropyrimidine dehydrogenase (NADP+) activity	0.00E+00
3	GO:0004846: urate oxidase activity	0.00E+00
4	GO:0019707: protein-cysteine S-acyltransferase activity	4.88E-05
5	GO:0004175: endopeptidase activity	8.25E-05
6	GO:0010331: gibberellin binding	1.20E-04
7	GO:0003988: acetyl-CoA C-acyltransferase activity	1.20E-04
8	GO:0005509: calcium ion binding	1.57E-04
9	GO:0080054: low-affinity nitrate transmembrane transporter activity	2.06E-04
10	GO:0016151: nickel cation binding	2.06E-04
11	GO:0005047: signal recognition particle binding	2.06E-04
12	GO:0000975: regulatory region DNA binding	2.06E-04
13	GO:0030527: structural constituent of chromatin	3.01E-04
14	GO:0004749: ribose phosphate diphosphokinase activity	3.01E-04
15	GO:0008276: protein methyltransferase activity	3.01E-04
16	GO:0004197: cysteine-type endopeptidase activity	3.32E-04
17	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	5.13E-04
18	GO:0036402: proteasome-activating ATPase activity	6.29E-04
19	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	7.50E-04
20	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	7.50E-04
21	GO:0004620: phospholipase activity	8.75E-04
22	GO:0052747: sinapyl alcohol dehydrogenase activity	1.01E-03
23	GO:0004869: cysteine-type endopeptidase inhibitor activity	1.01E-03
24	GO:0004630: phospholipase D activity	1.14E-03
25	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	1.14E-03
26	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	1.28E-03
27	GO:0008234: cysteine-type peptidase activity	1.36E-03
28	GO:0045309: protein phosphorylated amino acid binding	1.43E-03
29	GO:0008171: O-methyltransferase activity	1.59E-03
30	GO:0019904: protein domain specific binding	1.75E-03
31	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.91E-03
32	GO:0016887: ATPase activity	2.03E-03
33	GO:0008131: primary amine oxidase activity	2.26E-03
34	GO:0031624: ubiquitin conjugating enzyme binding	2.26E-03
35	GO:0017025: TBP-class protein binding	2.44E-03
36	GO:0004190: aspartic-type endopeptidase activity	2.44E-03
37	GO:0019706: protein-cysteine S-palmitoyltransferase activity	3.20E-03
38	GO:0042802: identical protein binding	3.75E-03
39	GO:0048038: quinone binding	5.18E-03
40	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	6.16E-03
41	GO:0042803: protein homodimerization activity	7.06E-03
42	GO:0009931: calcium-dependent protein serine/threonine kinase activity	7.20E-03
43	GO:0004683: calmodulin-dependent protein kinase activity	7.48E-03
44	GO:0003924: GTPase activity	8.31E-03
45	GO:0005096: GTPase activator activity	8.31E-03
46	GO:0015293: symporter activity	1.23E-02
47	GO:0005198: structural molecule activity	1.23E-02
48	GO:0005515: protein binding	1.45E-02
49	GO:0016787: hydrolase activity	1.55E-02
50	GO:0005524: ATP binding	1.62E-02
51	GO:0005507: copper ion binding	2.11E-02
52	GO:0005525: GTP binding	2.44E-02
53	GO:0000287: magnesium ion binding	3.56E-02
54	GO:0046982: protein heterodimerization activity	3.56E-02
55	GO:0003682: chromatin binding	3.76E-02
56	GO:0016491: oxidoreductase activity	3.94E-02
57	GO:0061630: ubiquitin protein ligase activity	4.36E-02
58	GO:0004871: signal transducer activity	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0005785: signal recognition particle receptor complex	0.00E+00
3	GO:0000323: lytic vacuole	1.36E-06
4	GO:0000138: Golgi trans cisterna	4.88E-05
5	GO:0005777: peroxisome	5.65E-05
6	GO:0005829: cytosol	1.02E-04
7	GO:0071782: endoplasmic reticulum tubular network	3.01E-04
8	GO:0000164: protein phosphatase type 1 complex	5.13E-04
9	GO:0031597: cytosolic proteasome complex	7.50E-04
10	GO:0031595: nuclear proteasome complex	8.75E-04
11	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	1.01E-03
12	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	1.14E-03
13	GO:0009514: glyoxysome	1.14E-03
14	GO:0005779: integral component of peroxisomal membrane	1.14E-03
15	GO:0005635: nuclear envelope	1.31E-03
16	GO:0030665: clathrin-coated vesicle membrane	1.43E-03
17	GO:0008540: proteasome regulatory particle, base subcomplex	1.43E-03
18	GO:0017119: Golgi transport complex	1.59E-03
19	GO:0005783: endoplasmic reticulum	1.61E-03
20	GO:0005764: lysosome	2.26E-03
21	GO:0005769: early endosome	2.62E-03
22	GO:0005773: vacuole	3.66E-03
23	GO:0030136: clathrin-coated vesicle	4.04E-03
24	GO:0000785: chromatin	5.42E-03
25	GO:0005778: peroxisomal membrane	6.16E-03
26	GO:0000151: ubiquitin ligase complex	8.03E-03
27	GO:0005886: plasma membrane	9.43E-03
28	GO:0005819: spindle	1.01E-02
29	GO:0031902: late endosome membrane	1.07E-02
30	GO:0031966: mitochondrial membrane	1.33E-02
31	GO:0000502: proteasome complex	1.40E-02
32	GO:0009570: chloroplast stroma	1.88E-02
33	GO:0005623: cell	2.14E-02
34	GO:0005737: cytoplasm	2.17E-02
35	GO:0009524: phragmoplast	2.18E-02
36	GO:0005802: trans-Golgi network	2.37E-02
37	GO:0005615: extracellular space	2.87E-02
38	GO:0005794: Golgi apparatus	2.98E-02
39	GO:0016020: membrane	3.34E-02
40	GO:0009536: plastid	3.68E-02
41	GO:0005789: endoplasmic reticulum membrane	4.56E-02