co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G26530

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0061635: regulation of protein complex stability	0.00E+00
2	GO:0019265: glycine biosynthetic process, by transamination of glyoxylate	0.00E+00
3	GO:0006003: fructose 2,6-bisphosphate metabolic process	0.00E+00
4	GO:0061157: mRNA destabilization	0.00E+00
5	GO:0006000: fructose metabolic process	6.22E-09
6	GO:0009773: photosynthetic electron transport in photosystem I	1.05E-07
7	GO:0042549: photosystem II stabilization	4.01E-07
8	GO:0030388: fructose 1,6-bisphosphate metabolic process	1.32E-06
9	GO:0015979: photosynthesis	2.37E-06
10	GO:0006002: fructose 6-phosphate metabolic process	2.60E-06
11	GO:0006094: gluconeogenesis	1.38E-05
12	GO:0010207: photosystem II assembly	1.70E-05
13	GO:0015994: chlorophyll metabolic process	2.11E-05
14	GO:0045454: cell redox homeostasis	3.25E-05
15	GO:0015969: guanosine tetraphosphate metabolic process	1.64E-04
16	GO:0000476: maturation of 4.5S rRNA	1.64E-04
17	GO:0000967: rRNA 5'-end processing	1.64E-04
18	GO:0000481: maturation of 5S rRNA	1.64E-04
19	GO:0043609: regulation of carbon utilization	1.64E-04
20	GO:0010028: xanthophyll cycle	1.64E-04
21	GO:0034337: RNA folding	1.64E-04
22	GO:0009735: response to cytokinin	1.78E-04
23	GO:0010205: photoinhibition	2.25E-04
24	GO:0034755: iron ion transmembrane transport	3.73E-04
25	GO:0035304: regulation of protein dephosphorylation	3.73E-04
26	GO:1900871: chloroplast mRNA modification	3.73E-04
27	GO:0042325: regulation of phosphorylation	3.73E-04
28	GO:0016122: xanthophyll metabolic process	3.73E-04
29	GO:0034470: ncRNA processing	3.73E-04
30	GO:0009767: photosynthetic electron transport chain	4.03E-04
31	GO:0005986: sucrose biosynthetic process	4.03E-04
32	GO:0019253: reductive pentose-phosphate cycle	4.55E-04
33	GO:0006013: mannose metabolic process	6.11E-04
34	GO:0006518: peptide metabolic process	6.11E-04
35	GO:0071230: cellular response to amino acid stimulus	6.11E-04
36	GO:0009768: photosynthesis, light harvesting in photosystem I	6.90E-04
37	GO:2001141: regulation of RNA biosynthetic process	8.73E-04
38	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	8.73E-04
39	GO:0045727: positive regulation of translation	1.16E-03
40	GO:0010023: proanthocyanidin biosynthetic process	1.16E-03
41	GO:0006662: glycerol ether metabolic process	1.21E-03
42	GO:0043097: pyrimidine nucleoside salvage	1.47E-03
43	GO:0045038: protein import into chloroplast thylakoid membrane	1.47E-03
44	GO:0006461: protein complex assembly	1.47E-03
45	GO:0006206: pyrimidine nucleobase metabolic process	1.80E-03
46	GO:0000741: karyogamy	1.80E-03
47	GO:1902456: regulation of stomatal opening	1.80E-03
48	GO:0006810: transport	1.99E-03
49	GO:0010196: nonphotochemical quenching	2.55E-03
50	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	2.55E-03
51	GO:0009772: photosynthetic electron transport in photosystem II	2.55E-03
52	GO:0009642: response to light intensity	2.95E-03
53	GO:0032508: DNA duplex unwinding	2.95E-03
54	GO:0010492: maintenance of shoot apical meristem identity	2.95E-03
55	GO:0010218: response to far red light	3.07E-03
56	GO:0071482: cellular response to light stimulus	3.37E-03
57	GO:0009657: plastid organization	3.37E-03
58	GO:0032544: plastid translation	3.37E-03
59	GO:0009932: cell tip growth	3.37E-03
60	GO:0034599: cellular response to oxidative stress	3.68E-03
61	GO:0006098: pentose-phosphate shunt	3.81E-03
62	GO:0048507: meristem development	3.81E-03
63	GO:0090305: nucleic acid phosphodiester bond hydrolysis	3.81E-03
64	GO:0010206: photosystem II repair	3.81E-03
65	GO:0000373: Group II intron splicing	3.81E-03
66	GO:0009638: phototropism	4.27E-03
67	GO:0010114: response to red light	4.53E-03
68	GO:0006949: syncytium formation	4.75E-03
69	GO:0009644: response to high light intensity	4.90E-03
70	GO:0006816: calcium ion transport	5.25E-03
71	GO:0009698: phenylpropanoid metabolic process	5.25E-03
72	GO:0019684: photosynthesis, light reaction	5.25E-03
73	GO:0043085: positive regulation of catalytic activity	5.25E-03
74	GO:0006879: cellular iron ion homeostasis	5.25E-03
75	GO:0006352: DNA-templated transcription, initiation	5.25E-03
76	GO:0009750: response to fructose	5.25E-03
77	GO:0018119: peptidyl-cysteine S-nitrosylation	5.25E-03
78	GO:0005983: starch catabolic process	5.77E-03
79	GO:0018107: peptidyl-threonine phosphorylation	6.30E-03
80	GO:0009718: anthocyanin-containing compound biosynthetic process	6.30E-03
81	GO:0005985: sucrose metabolic process	7.41E-03
82	GO:0010053: root epidermal cell differentiation	7.41E-03
83	GO:0034976: response to endoplasmic reticulum stress	8.00E-03
84	GO:0006874: cellular calcium ion homeostasis	9.21E-03
85	GO:0061077: chaperone-mediated protein folding	9.84E-03
86	GO:0010017: red or far-red light signaling pathway	1.05E-02
87	GO:0008152: metabolic process	1.05E-02
88	GO:0019748: secondary metabolic process	1.05E-02
89	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.11E-02
90	GO:0009686: gibberellin biosynthetic process	1.11E-02
91	GO:0009958: positive gravitropism	1.39E-02
92	GO:0010197: polar nucleus fusion	1.39E-02
93	GO:0010268: brassinosteroid homeostasis	1.39E-02
94	GO:0006413: translational initiation	1.40E-02
95	GO:0009451: RNA modification	1.54E-02
96	GO:0010193: response to ozone	1.62E-02
97	GO:0016132: brassinosteroid biosynthetic process	1.62E-02
98	GO:0016032: viral process	1.70E-02
99	GO:0009630: gravitropism	1.70E-02
100	GO:0030163: protein catabolic process	1.77E-02
101	GO:0016125: sterol metabolic process	1.86E-02
102	GO:0009828: plant-type cell wall loosening	1.86E-02
103	GO:0009416: response to light stimulus	1.92E-02
104	GO:0071805: potassium ion transmembrane transport	1.94E-02
105	GO:0055114: oxidation-reduction process	2.02E-02
106	GO:0009409: response to cold	2.09E-02
107	GO:0001666: response to hypoxia	2.10E-02
108	GO:0042128: nitrate assimilation	2.27E-02
109	GO:0016311: dephosphorylation	2.45E-02
110	GO:0006508: proteolysis	2.49E-02
111	GO:0018298: protein-chromophore linkage	2.54E-02
112	GO:0009723: response to ethylene	2.70E-02
113	GO:0006811: ion transport	2.72E-02
114	GO:0006499: N-terminal protein myristoylation	2.72E-02
115	GO:0009853: photorespiration	3.01E-02
116	GO:0045087: innate immune response	3.01E-02
117	GO:0009637: response to blue light	3.01E-02
118	GO:0006631: fatty acid metabolic process	3.40E-02
119	GO:0006855: drug transmembrane transport	4.02E-02
120	GO:0009737: response to abscisic acid	4.06E-02
121	GO:0009664: plant-type cell wall organization	4.23E-02
122	GO:0006364: rRNA processing	4.45E-02
123	GO:0009585: red, far-red light phototransduction	4.45E-02
124	GO:0006813: potassium ion transport	4.45E-02
125	GO:0051603: proteolysis involved in cellular protein catabolic process	4.56E-02
126	GO:0010224: response to UV-B	4.56E-02

Rank	GO Term	Adjusted P value
1	GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity	0.00E+00
2	GO:0046422: violaxanthin de-epoxidase activity	0.00E+00
3	GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors	0.00E+00
4	GO:0004760: serine-pyruvate transaminase activity	0.00E+00
5	GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity	0.00E+00
6	GO:0003873: 6-phosphofructo-2-kinase activity	0.00E+00
7	GO:0008974: phosphoribulokinase activity	0.00E+00
8	GO:0008942: nitrite reductase [NAD(P)H] activity	0.00E+00
9	GO:0050281: serine-glyoxylate transaminase activity	0.00E+00
10	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	1.32E-06
11	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	1.32E-06
12	GO:0005528: FK506 binding	2.96E-05
13	GO:0008066: glutamate receptor activity	1.64E-04
14	GO:0010242: oxygen evolving activity	1.64E-04
15	GO:0051777: ent-kaurenoate oxidase activity	1.64E-04
16	GO:0008728: GTP diphosphokinase activity	3.73E-04
17	GO:0047746: chlorophyllase activity	3.73E-04
18	GO:0016868: intramolecular transferase activity, phosphotransferases	3.73E-04
19	GO:0005094: Rho GDP-dissociation inhibitor activity	3.73E-04
20	GO:0004565: beta-galactosidase activity	4.03E-04
21	GO:0008266: poly(U) RNA binding	4.55E-04
22	GO:0004185: serine-type carboxypeptidase activity	5.53E-04
23	GO:0004148: dihydrolipoyl dehydrogenase activity	6.11E-04
24	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	6.72E-04
25	GO:0015079: potassium ion transmembrane transporter activity	6.90E-04
26	GO:0019201: nucleotide kinase activity	8.73E-04
27	GO:0047134: protein-disulfide reductase activity	1.05E-03
28	GO:0008453: alanine-glyoxylate transaminase activity	1.16E-03
29	GO:0016987: sigma factor activity	1.16E-03
30	GO:0001053: plastid sigma factor activity	1.16E-03
31	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.16E-03
32	GO:0004791: thioredoxin-disulfide reductase activity	1.30E-03
33	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.69E-03
34	GO:0004332: fructose-bisphosphate aldolase activity	1.80E-03
35	GO:0000293: ferric-chelate reductase activity	1.80E-03
36	GO:2001070: starch binding	1.80E-03
37	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	2.17E-03
38	GO:0004017: adenylate kinase activity	2.17E-03
39	GO:0004849: uridine kinase activity	2.17E-03
40	GO:0004559: alpha-mannosidase activity	2.17E-03
41	GO:0016787: hydrolase activity	4.19E-03
42	GO:0005381: iron ion transmembrane transporter activity	4.27E-03
43	GO:0008047: enzyme activator activity	4.75E-03
44	GO:0015386: potassium:proton antiporter activity	5.25E-03
45	GO:0005262: calcium channel activity	6.30E-03
46	GO:0019888: protein phosphatase regulator activity	6.30E-03
47	GO:0005217: intracellular ligand-gated ion channel activity	7.41E-03
48	GO:0004970: ionotropic glutamate receptor activity	7.41E-03
49	GO:0031409: pigment binding	8.00E-03
50	GO:0015035: protein disulfide oxidoreductase activity	8.94E-03
51	GO:0004707: MAP kinase activity	9.84E-03
52	GO:0004176: ATP-dependent peptidase activity	9.84E-03
53	GO:0005509: calcium ion binding	1.18E-02
54	GO:0003756: protein disulfide isomerase activity	1.18E-02
55	GO:0003727: single-stranded RNA binding	1.18E-02
56	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.40E-02
57	GO:0050662: coenzyme binding	1.47E-02
58	GO:0048038: quinone binding	1.62E-02
59	GO:0004518: nuclease activity	1.70E-02
60	GO:0042802: identical protein binding	1.92E-02
61	GO:0008483: transaminase activity	1.94E-02
62	GO:0016491: oxidoreductase activity	2.01E-02
63	GO:0003723: RNA binding	2.02E-02
64	GO:0016168: chlorophyll binding	2.19E-02
65	GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding	2.45E-02
66	GO:0008236: serine-type peptidase activity	2.45E-02
67	GO:0015238: drug transmembrane transporter activity	2.63E-02
68	GO:0005096: GTPase activator activity	2.63E-02
69	GO:0004222: metalloendopeptidase activity	2.72E-02
70	GO:0050897: cobalt ion binding	2.82E-02
71	GO:0030145: manganese ion binding	2.82E-02
72	GO:0003746: translation elongation factor activity	3.01E-02
73	GO:0000987: core promoter proximal region sequence-specific DNA binding	3.10E-02
74	GO:0051537: 2 iron, 2 sulfur cluster binding	3.81E-02
75	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	4.45E-02
76	GO:0016298: lipase activity	4.56E-02
77	GO:0004519: endonuclease activity	4.63E-02

Rank	GO Term	Adjusted P value
1	GO:0005943: phosphatidylinositol 3-kinase complex, class IA	0.00E+00
2	GO:0098572: stromal side of plastid thylakoid membrane	0.00E+00
3	GO:0009507: chloroplast	2.02E-26
4	GO:0009534: chloroplast thylakoid	9.53E-26
5	GO:0009535: chloroplast thylakoid membrane	1.14E-24
6	GO:0009579: thylakoid	1.50E-15
7	GO:0009543: chloroplast thylakoid lumen	3.25E-14
8	GO:0030095: chloroplast photosystem II	1.43E-13
9	GO:0009941: chloroplast envelope	7.81E-13
10	GO:0009570: chloroplast stroma	1.45E-11
11	GO:0009533: chloroplast stromal thylakoid	1.15E-06
12	GO:0009523: photosystem II	4.05E-06
13	GO:0009654: photosystem II oxygen evolving complex	3.48E-05
14	GO:0031977: thylakoid lumen	4.15E-05
15	GO:0019898: extrinsic component of membrane	1.09E-04
16	GO:0009344: nitrite reductase complex [NAD(P)H]	1.64E-04
17	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	1.87E-04
18	GO:0010287: plastoglobule	2.14E-04
19	GO:0080085: signal recognition particle, chloroplast targeting	3.73E-04
20	GO:0048046: apoplast	4.12E-04
21	GO:0042651: thylakoid membrane	6.90E-04
22	GO:0009522: photosystem I	1.30E-03
23	GO:0010319: stromule	1.91E-03
24	GO:0009538: photosystem I reaction center	2.95E-03
25	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	3.37E-03
26	GO:0042644: chloroplast nucleoid	3.81E-03
27	GO:0000159: protein phosphatase type 2A complex	5.25E-03
28	GO:0032040: small-subunit processome	5.77E-03
29	GO:0009508: plastid chromosome	6.30E-03
30	GO:0016021: integral component of membrane	1.08E-02
31	GO:0005623: cell	1.12E-02
32	GO:0009505: plant-type cell wall	1.86E-02
33	GO:0009295: nucleoid	1.94E-02
34	GO:0030529: intracellular ribonucleoprotein complex	2.10E-02
35	GO:0005773: vacuole	2.41E-02
36	GO:0031969: chloroplast membrane	2.89E-02
37	GO:0016020: membrane	4.57E-02
38	GO:0043231: intracellular membrane-bounded organelle	4.69E-02