Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G25730

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006182: cGMP biosynthetic process0.00E+00
2GO:0017126: nucleologenesis0.00E+00
3GO:0044794: positive regulation by host of viral process0.00E+00
4GO:0006744: ubiquinone biosynthetic process2.04E-04
5GO:0017004: cytochrome complex assembly2.71E-04
6GO:0015996: chlorophyll catabolic process2.71E-04
7GO:0051302: regulation of cell division7.09E-04
8GO:0006397: mRNA processing9.77E-04
9GO:0008033: tRNA processing9.85E-04
10GO:0080156: mitochondrial mRNA modification1.18E-03
11GO:0010193: response to ozone1.18E-03
12GO:0016032: viral process1.23E-03
13GO:0006412: translation2.72E-03
14GO:0010224: response to UV-B3.11E-03
15GO:0006417: regulation of translation3.26E-03
16GO:0009620: response to fungus3.63E-03
17GO:0000398: mRNA splicing, via spliceosome4.26E-03
18GO:0009790: embryo development5.00E-03
19GO:0006413: translational initiation5.35E-03
20GO:0007166: cell surface receptor signaling pathway6.15E-03
21GO:0008380: RNA splicing6.34E-03
22GO:0009617: response to bacterium6.34E-03
23GO:0042254: ribosome biogenesis7.69E-03
24GO:0009751: response to salicylic acid1.15E-02
25GO:0009735: response to cytokinin1.63E-02
26GO:0055085: transmembrane transport2.06E-02
27GO:0006457: protein folding2.09E-02
RankGO TermAdjusted P value
1GO:0008143: poly(A) binding7.61E-07
2GO:0003729: mRNA binding2.08E-06
3GO:0043141: ATP-dependent 5'-3' DNA helicase activity2.19E-05
4GO:0010181: FMN binding2.22E-05
5GO:0004383: guanylate cyclase activity3.99E-05
6GO:0003678: DNA helicase activity3.07E-04
7GO:0008559: xenobiotic-transporting ATPase activity4.19E-04
8GO:0005524: ATP binding4.88E-04
9GO:0003723: RNA binding7.67E-04
10GO:0000166: nucleotide binding1.62E-03
11GO:0030247: polysaccharide binding1.67E-03
12GO:0003697: single-stranded DNA binding2.10E-03
13GO:0051539: 4 iron, 4 sulfur cluster binding2.29E-03
14GO:0043621: protein self-association2.62E-03
15GO:0016491: oxidoreductase activity4.25E-03
16GO:0016829: lyase activity4.75E-03
17GO:0003743: translation initiation factor activity6.25E-03
18GO:0003735: structural constituent of ribosome6.40E-03
19GO:0042626: ATPase activity, coupled to transmembrane movement of substances6.62E-03
20GO:0004674: protein serine/threonine kinase activity1.59E-02
21GO:0016740: transferase activity2.01E-02
22GO:0005507: copper ion binding2.24E-02
23GO:0005509: calcium ion binding2.72E-02
24GO:0005215: transporter activity3.10E-02
25GO:0005515: protein binding4.19E-02
RankGO TermAdjusted P value
1GO:0005746: mitochondrial respiratory chain1.12E-04
2GO:0010494: cytoplasmic stress granule3.07E-04
3GO:0080008: Cul4-RING E3 ubiquitin ligase complex5.76E-04
4GO:0022625: cytosolic large ribosomal subunit6.80E-04
5GO:0005788: endoplasmic reticulum lumen1.56E-03
6GO:0000325: plant-type vacuole1.97E-03
7GO:0005840: ribosome3.39E-03
8GO:0005681: spliceosomal complex3.40E-03
9GO:0016607: nuclear speck3.48E-03
10GO:0005834: heterotrimeric G-protein complex3.56E-03
11GO:0005730: nucleolus5.44E-03
12GO:0005743: mitochondrial inner membrane1.10E-02
13GO:0005829: cytosol1.63E-02
14GO:0022626: cytosolic ribosome1.69E-02
15GO:0005737: cytoplasm3.53E-02
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Gene type



Gene DE type