co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G25700

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1900000: regulation of anthocyanin catabolic process	0.00E+00
2	GO:0015822: ornithine transport	0.00E+00
3	GO:0090706: specification of plant organ position	0.00E+00
4	GO:0051180: vitamin transport	3.90E-05
5	GO:0030974: thiamine pyrophosphate transport	3.90E-05
6	GO:0065002: intracellular protein transmembrane transport	3.90E-05
7	GO:0000066: mitochondrial ornithine transport	3.90E-05
8	GO:0010450: inflorescence meristem growth	3.90E-05
9	GO:0043953: protein transport by the Tat complex	3.90E-05
10	GO:0016560: protein import into peroxisome matrix, docking	9.72E-05
11	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	9.72E-05
12	GO:0015893: drug transport	9.72E-05
13	GO:0045165: cell fate commitment	1.68E-04
14	GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement	1.68E-04
15	GO:0031022: nuclear migration along microfilament	1.68E-04
16	GO:0009405: pathogenesis	1.68E-04
17	GO:0010305: leaf vascular tissue pattern formation	1.86E-04
18	GO:0006515: misfolded or incompletely synthesized protein catabolic process	2.48E-04
19	GO:0016126: sterol biosynthetic process	3.37E-04
20	GO:0046785: microtubule polymerization	4.25E-04
21	GO:0009904: chloroplast accumulation movement	4.25E-04
22	GO:1902183: regulation of shoot apical meristem development	4.25E-04
23	GO:0010158: abaxial cell fate specification	4.25E-04
24	GO:0016120: carotene biosynthetic process	4.25E-04
25	GO:0009910: negative regulation of flower development	5.06E-04
26	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	5.22E-04
27	GO:0009903: chloroplast avoidance movement	6.22E-04
28	GO:0006839: mitochondrial transport	6.27E-04
29	GO:1900057: positive regulation of leaf senescence	7.28E-04
30	GO:0051510: regulation of unidimensional cell growth	7.28E-04
31	GO:1900056: negative regulation of leaf senescence	7.28E-04
32	GO:0006629: lipid metabolic process	8.23E-04
33	GO:0006402: mRNA catabolic process	8.37E-04
34	GO:0009690: cytokinin metabolic process	8.37E-04
35	GO:0010100: negative regulation of photomorphogenesis	9.50E-04
36	GO:0010093: specification of floral organ identity	9.50E-04
37	GO:2000024: regulation of leaf development	1.07E-03
38	GO:0000373: Group II intron splicing	1.07E-03
39	GO:0048507: meristem development	1.07E-03
40	GO:0010380: regulation of chlorophyll biosynthetic process	1.19E-03
41	GO:0016485: protein processing	1.44E-03
42	GO:0046856: phosphatidylinositol dephosphorylation	1.44E-03
43	GO:2000028: regulation of photoperiodism, flowering	1.72E-03
44	GO:0010207: photosystem II assembly	1.86E-03
45	GO:0009933: meristem structural organization	1.86E-03
46	GO:0009944: polarity specification of adaxial/abaxial axis	2.32E-03
47	GO:2000377: regulation of reactive oxygen species metabolic process	2.32E-03
48	GO:0040007: growth	2.97E-03
49	GO:0016117: carotenoid biosynthetic process	3.32E-03
50	GO:0009658: chloroplast organization	3.42E-03
51	GO:0042631: cellular response to water deprivation	3.50E-03
52	GO:0009741: response to brassinosteroid	3.69E-03
53	GO:0071472: cellular response to salt stress	3.69E-03
54	GO:0010154: fruit development	3.69E-03
55	GO:0007018: microtubule-based movement	3.87E-03
56	GO:0009791: post-embryonic development	4.06E-03
57	GO:0016032: viral process	4.45E-03
58	GO:0010090: trichome morphogenesis	4.65E-03
59	GO:0009567: double fertilization forming a zygote and endosperm	4.85E-03
60	GO:0010027: thylakoid membrane organization	5.47E-03
61	GO:0048527: lateral root development	7.27E-03
62	GO:0009734: auxin-activated signaling pathway	8.77E-03
63	GO:0009640: photomorphogenesis	9.25E-03
64	GO:0009908: flower development	9.99E-03
65	GO:0009585: red, far-red light phototransduction	1.14E-02
66	GO:0009909: regulation of flower development	1.23E-02
67	GO:0006096: glycolytic process	1.28E-02
68	GO:0048316: seed development	1.31E-02
69	GO:0009626: plant-type hypersensitive response	1.34E-02
70	GO:0055085: transmembrane transport	1.41E-02
71	GO:0009742: brassinosteroid mediated signaling pathway	1.52E-02
72	GO:0009790: embryo development	1.91E-02
73	GO:0006413: translational initiation	2.05E-02
74	GO:0007166: cell surface receptor signaling pathway	2.37E-02
75	GO:0009826: unidimensional cell growth	2.86E-02
76	GO:0006810: transport	3.30E-02
77	GO:0006952: defense response	3.54E-02
78	GO:0046777: protein autophosphorylation	3.60E-02
79	GO:0055114: oxidation-reduction process	4.41E-02
80	GO:0006397: mRNA processing	4.66E-02
81	GO:0048364: root development	4.66E-02
82	GO:0009753: response to jasmonic acid	4.76E-02

Rank	GO Term	Adjusted P value
1	GO:0045436: lycopene beta cyclase activity	0.00E+00
2	GO:0004506: squalene monooxygenase activity	1.81E-06
3	GO:0080062: cytokinin 9-beta-glucosyltransferase activity	3.90E-05
4	GO:0047807: cytokinin 7-beta-glucosyltransferase activity	3.90E-05
5	GO:0090422: thiamine pyrophosphate transporter activity	3.90E-05
6	GO:0009977: proton motive force dependent protein transmembrane transporter activity	9.72E-05
7	GO:0000064: L-ornithine transmembrane transporter activity	9.72E-05
8	GO:0090729: toxin activity	1.68E-04
9	GO:0016805: dipeptidase activity	1.68E-04
10	GO:0004180: carboxypeptidase activity	1.68E-04
11	GO:0008017: microtubule binding	2.30E-04
12	GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity	3.33E-04
13	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	5.22E-04
14	GO:0003777: microtubule motor activity	1.03E-03
15	GO:0000989: transcription factor activity, transcription factor binding	1.07E-03
16	GO:0019904: protein domain specific binding	1.44E-03
17	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	1.58E-03
18	GO:0008081: phosphoric diester hydrolase activity	1.72E-03
19	GO:0004190: aspartic-type endopeptidase activity	2.01E-03
20	GO:0016787: hydrolase activity	2.23E-03
21	GO:0004176: ATP-dependent peptidase activity	2.64E-03
22	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	2.82E-03
23	GO:0050660: flavin adenine dinucleotide binding	3.95E-03
24	GO:0004806: triglyceride lipase activity	6.13E-03
25	GO:0008236: serine-type peptidase activity	6.35E-03
26	GO:0016298: lipase activity	1.17E-02
27	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.37E-02
28	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.37E-02
29	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.75E-02
30	GO:0030170: pyridoxal phosphate binding	1.85E-02
31	GO:0004252: serine-type endopeptidase activity	1.85E-02
32	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.05E-02
33	GO:0008194: UDP-glycosyltransferase activity	2.34E-02
34	GO:0005215: transporter activity	2.49E-02
35	GO:0042802: identical protein binding	2.56E-02
36	GO:0008233: peptidase activity	3.39E-02
37	GO:0005524: ATP binding	4.49E-02
38	GO:0009055: electron carrier activity	4.76E-02

Rank	GO Term	Adjusted P value
1	GO:0043235: receptor complex	0.00E+00
2	GO:0043233: organelle lumen	0.00E+00
3	GO:0031361: integral component of thylakoid membrane	3.90E-05
4	GO:0033281: TAT protein transport complex	1.68E-04
5	GO:0005782: peroxisomal matrix	1.68E-04
6	GO:0030660: Golgi-associated vesicle membrane	3.33E-04
7	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	3.33E-04
8	GO:0030529: intracellular ribonucleoprotein complex	3.37E-04
9	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	8.37E-04
10	GO:0005576: extracellular region	9.08E-04
11	GO:0008180: COP9 signalosome	1.07E-03
12	GO:0055028: cortical microtubule	1.31E-03
13	GO:0005765: lysosomal membrane	1.44E-03
14	GO:0005578: proteinaceous extracellular matrix	1.72E-03
15	GO:0005871: kinesin complex	3.32E-03
16	GO:0005874: microtubule	4.09E-03
17	GO:0005743: mitochondrial inner membrane	5.79E-03
18	GO:0019005: SCF ubiquitin ligase complex	6.58E-03
19	GO:0000502: proteasome complex	1.14E-02
20	GO:0010008: endosome membrane	1.31E-02
21	GO:0005886: plasma membrane	1.60E-02
22	GO:0009543: chloroplast thylakoid lumen	1.72E-02
23	GO:0005623: cell	1.75E-02
24	GO:0009536: plastid	2.76E-02
25	GO:0009507: chloroplast	2.85E-02
26	GO:0009941: chloroplast envelope	2.88E-02
27	GO:0031969: chloroplast membrane	3.43E-02
28	GO:0009570: chloroplast stroma	4.35E-02
29	GO:0043231: intracellular membrane-bounded organelle	4.85E-02