co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G25640

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006069: ethanol oxidation	0.00E+00
2	GO:0000169: activation of MAPK activity involved in osmosensory signaling pathway	0.00E+00
3	GO:0046292: formaldehyde metabolic process	0.00E+00
4	GO:0048227: plasma membrane to endosome transport	0.00E+00
5	GO:0006499: N-terminal protein myristoylation	1.23E-05
6	GO:0035266: meristem growth	3.12E-05
7	GO:0007292: female gamete generation	3.12E-05
8	GO:0080136: priming of cellular response to stress	3.12E-05
9	GO:0051788: response to misfolded protein	7.88E-05
10	GO:0010359: regulation of anion channel activity	1.37E-04
11	GO:0060968: regulation of gene silencing	1.37E-04
12	GO:0007264: small GTPase mediated signal transduction	1.85E-04
13	GO:0001676: long-chain fatty acid metabolic process	2.04E-04
14	GO:0007231: osmosensory signaling pathway	2.04E-04
15	GO:0072334: UDP-galactose transmembrane transport	2.04E-04
16	GO:0033500: carbohydrate homeostasis	2.76E-04
17	GO:2000038: regulation of stomatal complex development	2.76E-04
18	GO:0006878: cellular copper ion homeostasis	2.76E-04
19	GO:1902584: positive regulation of response to water deprivation	2.76E-04
20	GO:0031365: N-terminal protein amino acid modification	3.53E-04
21	GO:0045927: positive regulation of growth	3.53E-04
22	GO:1902456: regulation of stomatal opening	4.34E-04
23	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	4.34E-04
24	GO:0048827: phyllome development	4.34E-04
25	GO:0048232: male gamete generation	4.34E-04
26	GO:0043248: proteasome assembly	4.34E-04
27	GO:0035435: phosphate ion transmembrane transport	4.34E-04
28	GO:2000037: regulation of stomatal complex patterning	5.20E-04
29	GO:0034389: lipid particle organization	5.20E-04
30	GO:0043090: amino acid import	6.07E-04
31	GO:0080186: developmental vegetative growth	6.07E-04
32	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	6.07E-04
33	GO:0006605: protein targeting	6.99E-04
34	GO:0010078: maintenance of root meristem identity	6.99E-04
35	GO:0010120: camalexin biosynthetic process	7.94E-04
36	GO:0009821: alkaloid biosynthetic process	8.92E-04
37	GO:0009626: plant-type hypersensitive response	8.92E-04
38	GO:0009620: response to fungus	9.18E-04
39	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	9.92E-04
40	GO:0009299: mRNA transcription	1.10E-03
41	GO:0000103: sulfate assimilation	1.10E-03
42	GO:0043069: negative regulation of programmed cell death	1.10E-03
43	GO:0048829: root cap development	1.10E-03
44	GO:0072593: reactive oxygen species metabolic process	1.20E-03
45	GO:0010015: root morphogenesis	1.20E-03
46	GO:0009611: response to wounding	1.20E-03
47	GO:0010229: inflorescence development	1.43E-03
48	GO:0010102: lateral root morphogenesis	1.43E-03
49	GO:0009933: meristem structural organization	1.55E-03
50	GO:0090351: seedling development	1.67E-03
51	GO:0010468: regulation of gene expression	2.01E-03
52	GO:0030433: ubiquitin-dependent ERAD pathway	2.32E-03
53	GO:0010227: floral organ abscission	2.46E-03
54	GO:0006468: protein phosphorylation	2.53E-03
55	GO:0042147: retrograde transport, endosome to Golgi	2.75E-03
56	GO:0042742: defense response to bacterium	2.84E-03
57	GO:0006662: glycerol ether metabolic process	3.05E-03
58	GO:0010183: pollen tube guidance	3.36E-03
59	GO:0046777: protein autophosphorylation	3.42E-03
60	GO:0010193: response to ozone	3.51E-03
61	GO:0010286: heat acclimation	4.17E-03
62	GO:0009615: response to virus	4.52E-03
63	GO:0009751: response to salicylic acid	4.64E-03
64	GO:0009408: response to heat	4.70E-03
65	GO:0048481: plant ovule development	5.42E-03
66	GO:0008219: cell death	5.42E-03
67	GO:0010311: lateral root formation	5.60E-03
68	GO:0010119: regulation of stomatal movement	5.99E-03
69	GO:0006865: amino acid transport	6.18E-03
70	GO:0045087: innate immune response	6.38E-03
71	GO:0034599: cellular response to oxidative stress	6.58E-03
72	GO:0006631: fatty acid metabolic process	7.19E-03
73	GO:0009738: abscisic acid-activated signaling pathway	8.05E-03
74	GO:0009965: leaf morphogenesis	8.24E-03
75	GO:0009555: pollen development	8.33E-03
76	GO:0010224: response to UV-B	9.59E-03
77	GO:0048367: shoot system development	1.08E-02
78	GO:0048316: seed development	1.08E-02
79	GO:0006508: proteolysis	1.18E-02
80	GO:0018105: peptidyl-serine phosphorylation	1.22E-02
81	GO:0009058: biosynthetic process	1.46E-02
82	GO:0006979: response to oxidative stress	1.71E-02
83	GO:0010150: leaf senescence	1.77E-02
84	GO:0045490: pectin catabolic process	1.77E-02
85	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.91E-02
86	GO:0009617: response to bacterium	2.00E-02
87	GO:0015031: protein transport	2.15E-02
88	GO:0006970: response to osmotic stress	2.54E-02
89	GO:0009723: response to ethylene	2.67E-02
90	GO:0055114: oxidation-reduction process	2.73E-02
91	GO:0080167: response to karrikin	2.81E-02
92	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.88E-02
93	GO:0010200: response to chitin	2.88E-02
94	GO:0045454: cell redox homeostasis	3.19E-02
95	GO:0006886: intracellular protein transport	3.27E-02
96	GO:0007275: multicellular organism development	3.33E-02
97	GO:0016042: lipid catabolic process	3.63E-02
98	GO:0048364: root development	3.82E-02
99	GO:0009753: response to jasmonic acid	3.90E-02

Rank	GO Term	Adjusted P value
1	GO:0080007: S-nitrosoglutathione reductase activity	0.00E+00
2	GO:0051903: S-(hydroxymethyl)glutathione dehydrogenase activity	0.00E+00
3	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	3.12E-05
4	GO:0005093: Rab GDP-dissociation inhibitor activity	1.37E-04
5	GO:0005047: signal recognition particle binding	1.37E-04
6	GO:0016174: NAD(P)H oxidase activity	1.37E-04
7	GO:0005459: UDP-galactose transmembrane transporter activity	3.53E-04
8	GO:0005524: ATP binding	4.19E-04
9	GO:0036402: proteasome-activating ATPase activity	4.34E-04
10	GO:0102391: decanoate--CoA ligase activity	5.20E-04
11	GO:0004467: long-chain fatty acid-CoA ligase activity	6.07E-04
12	GO:0008235: metalloexopeptidase activity	6.07E-04
13	GO:0004714: transmembrane receptor protein tyrosine kinase activity	6.99E-04
14	GO:0016844: strictosidine synthase activity	9.92E-04
15	GO:0004674: protein serine/threonine kinase activity	1.15E-03
16	GO:0004177: aminopeptidase activity	1.20E-03
17	GO:0004022: alcohol dehydrogenase (NAD) activity	1.43E-03
18	GO:0005315: inorganic phosphate transmembrane transporter activity	1.43E-03
19	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.43E-03
20	GO:0017025: TBP-class protein binding	1.67E-03
21	GO:0005516: calmodulin binding	1.95E-03
22	GO:0004707: MAP kinase activity	2.19E-03
23	GO:0005509: calcium ion binding	2.56E-03
24	GO:0047134: protein-disulfide reductase activity	2.75E-03
25	GO:0016301: kinase activity	2.82E-03
26	GO:0004791: thioredoxin-disulfide reductase activity	3.20E-03
27	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	3.84E-03
28	GO:0009931: calcium-dependent protein serine/threonine kinase activity	4.87E-03
29	GO:0004683: calmodulin-dependent protein kinase activity	5.05E-03
30	GO:0005096: GTPase activator activity	5.60E-03
31	GO:0004712: protein serine/threonine/tyrosine kinase activity	6.77E-03
32	GO:0016887: ATPase activity	7.27E-03
33	GO:0015293: symporter activity	8.24E-03
34	GO:0016298: lipase activity	9.59E-03
35	GO:0008234: cysteine-type peptidase activity	1.01E-02
36	GO:0015171: amino acid transmembrane transporter activity	1.01E-02
37	GO:0015035: protein disulfide oxidoreductase activity	1.22E-02
38	GO:0005525: GTP binding	1.37E-02
39	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.43E-02
40	GO:0008565: protein transporter activity	1.60E-02
41	GO:0000287: magnesium ion binding	2.38E-02
42	GO:0004601: peroxidase activity	2.41E-02
43	GO:0016788: hydrolase activity, acting on ester bonds	2.44E-02
44	GO:0004672: protein kinase activity	2.49E-02
45	GO:0043531: ADP binding	2.57E-02
46	GO:0004497: monooxygenase activity	2.81E-02
47	GO:0052689: carboxylic ester hydrolase activity	3.02E-02
48	GO:0003924: GTPase activity	3.71E-02
49	GO:0005515: protein binding	4.43E-02

Rank	GO Term	Adjusted P value
1	GO:0005785: signal recognition particle receptor complex	0.00E+00
2	GO:0046861: glyoxysomal membrane	1.37E-04
3	GO:0030904: retromer complex	4.34E-04
4	GO:0031597: cytosolic proteasome complex	5.20E-04
5	GO:0030173: integral component of Golgi membrane	5.20E-04
6	GO:0031595: nuclear proteasome complex	6.07E-04
7	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	7.94E-04
8	GO:0005811: lipid particle	7.94E-04
9	GO:0009514: glyoxysome	7.94E-04
10	GO:0008540: proteasome regulatory particle, base subcomplex	9.92E-04
11	GO:0005623: cell	1.27E-03
12	GO:0030176: integral component of endoplasmic reticulum membrane	1.67E-03
13	GO:0019898: extrinsic component of membrane	3.36E-03
14	GO:0005886: plasma membrane	6.29E-03
15	GO:0031902: late endosome membrane	7.19E-03
16	GO:0005783: endoplasmic reticulum	8.62E-03
17	GO:0000502: proteasome complex	9.36E-03
18	GO:0005777: peroxisome	9.56E-03
19	GO:0005622: intracellular	1.48E-02
20	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	2.57E-02
21	GO:0016020: membrane	2.64E-02