co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G25030

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0071433: cell wall repair	0.00E+00
2	GO:1902001: fatty acid transmembrane transport	0.00E+00
3	GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	0.00E+00
4	GO:0019673: GDP-mannose metabolic process	9.64E-06
5	GO:0071668: plant-type cell wall assembly	2.58E-05
6	GO:0055088: lipid homeostasis	2.58E-05
7	GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	2.58E-05
8	GO:0015908: fatty acid transport	2.58E-05
9	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	4.69E-05
10	GO:0033014: tetrapyrrole biosynthetic process	7.16E-05
11	GO:0000460: maturation of 5.8S rRNA	9.96E-05
12	GO:0010387: COP9 signalosome assembly	9.96E-05
13	GO:0000470: maturation of LSU-rRNA	1.63E-04
14	GO:0000338: protein deneddylation	2.34E-04
15	GO:0006605: protein targeting	2.72E-04
16	GO:0006102: isocitrate metabolic process	2.72E-04
17	GO:0010208: pollen wall assembly	3.11E-04
18	GO:0006783: heme biosynthetic process	3.51E-04
19	GO:0006913: nucleocytoplasmic transport	4.78E-04
20	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.07E-03
21	GO:0001666: response to hypoxia	1.72E-03
22	GO:0015995: chlorophyll biosynthetic process	1.92E-03
23	GO:0010043: response to zinc ion	2.26E-03
24	GO:0006099: tricarboxylic acid cycle	2.48E-03
25	GO:0009640: photomorphogenesis	2.85E-03
26	GO:0042546: cell wall biogenesis	2.93E-03
27	GO:0009846: pollen germination	3.32E-03
28	GO:0009585: red, far-red light phototransduction	3.49E-03
29	GO:0006979: response to oxidative stress	4.00E-03
30	GO:0018105: peptidyl-serine phosphorylation	4.52E-03
31	GO:0009617: response to bacterium	7.30E-03
32	GO:0009826: unidimensional cell growth	8.51E-03
33	GO:0046777: protein autophosphorylation	1.07E-02
34	GO:0045454: cell redox homeostasis	1.15E-02
35	GO:0006886: intracellular protein transport	1.18E-02
36	GO:0048364: root development	1.38E-02
37	GO:0009753: response to jasmonic acid	1.41E-02
38	GO:0009416: response to light stimulus	2.01E-02
39	GO:0009555: pollen development	2.01E-02
40	GO:0035556: intracellular signal transduction	2.09E-02
41	GO:0006511: ubiquitin-dependent protein catabolic process	2.50E-02
42	GO:0042742: defense response to bacterium	3.33E-02
43	GO:0015031: protein transport	3.95E-02

Rank	GO Term	Adjusted P value
1	GO:0050220: prostaglandin-E synthase activity	0.00E+00
2	GO:0015245: fatty acid transporter activity	9.64E-06
3	GO:0008446: GDP-mannose 4,6-dehydratase activity	9.64E-06
4	GO:0004325: ferrochelatase activity	9.64E-06
5	GO:0043021: ribonucleoprotein complex binding	2.58E-05
6	GO:0004449: isocitrate dehydrogenase (NAD+) activity	7.16E-05
7	GO:0004602: glutathione peroxidase activity	1.98E-04
8	GO:0016746: transferase activity, transferring acyl groups	2.52E-04
9	GO:0005525: GTP binding	3.47E-04
10	GO:0004190: aspartic-type endopeptidase activity	6.61E-04
11	GO:0004298: threonine-type endopeptidase activity	8.59E-04
12	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.85E-03
13	GO:0004683: calmodulin-dependent protein kinase activity	1.92E-03
14	GO:0005096: GTPase activator activity	2.12E-03
15	GO:0004222: metalloendopeptidase activity	2.19E-03
16	GO:0003746: translation elongation factor activity	2.40E-03
17	GO:0051287: NAD binding	3.24E-03
18	GO:0015035: protein disulfide oxidoreductase activity	4.52E-03
19	GO:0000287: magnesium ion binding	8.63E-03
20	GO:0004601: peroxidase activity	8.74E-03
21	GO:0008233: peptidase activity	1.00E-02
22	GO:0003924: GTPase activity	1.34E-02
23	GO:0009055: electron carrier activity	1.41E-02
24	GO:0000166: nucleotide binding	2.01E-02
25	GO:0016740: transferase activity	2.32E-02
26	GO:0005516: calmodulin binding	2.69E-02
27	GO:0005509: calcium ion binding	3.14E-02
28	GO:0004672: protein kinase activity	4.38E-02

Rank	GO Term	Adjusted P value
1	GO:0070545: PeBoW complex	2.58E-05
2	GO:0030660: Golgi-associated vesicle membrane	9.96E-05
3	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	9.96E-05
4	GO:0032588: trans-Golgi network membrane	1.63E-04
5	GO:0030687: preribosome, large subunit precursor	2.34E-04
6	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	2.72E-04
7	GO:0019773: proteasome core complex, alpha-subunit complex	3.11E-04
8	GO:0008180: COP9 signalosome	3.51E-04
9	GO:0031901: early endosome membrane	3.51E-04
10	GO:0005765: lysosomal membrane	4.78E-04
11	GO:0005839: proteasome core complex	8.59E-04
12	GO:0031965: nuclear membrane	1.29E-03
13	GO:0005819: spindle	2.55E-03
14	GO:0000502: proteasome complex	3.49E-03
15	GO:0005635: nuclear envelope	3.65E-03
16	GO:0005834: heterotrimeric G-protein complex	4.08E-03
17	GO:0009706: chloroplast inner membrane	4.43E-03
18	GO:0009536: plastid	4.85E-03
19	GO:0005654: nucleoplasm	5.07E-03
20	GO:0005623: cell	5.27E-03
21	GO:0009524: phragmoplast	5.36E-03
22	GO:0005759: mitochondrial matrix	6.05E-03
23	GO:0009507: chloroplast	6.13E-03
24	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	9.33E-03
25	GO:0031969: chloroplast membrane	1.02E-02
26	GO:0005739: mitochondrion	1.14E-02
27	GO:0022626: cytosolic ribosome	1.95E-02
28	GO:0005829: cytosol	2.25E-02
29	GO:0005783: endoplasmic reticulum	2.78E-02
30	GO:0005622: intracellular	3.03E-02
31	GO:0005789: endoplasmic reticulum membrane	4.50E-02
32	GO:0005730: nucleolus	4.84E-02