GO Enrichment Analysis of Co-expressed Genes with
AT4G24670
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:2000042: negative regulation of double-strand break repair via homologous recombination | 0.00E+00 |
| 2 | GO:0060416: response to growth hormone | 0.00E+00 |
| 3 | GO:0099131: ATP hydrolysis coupled ion transmembrane transport | 0.00E+00 |
| 4 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 5 | GO:0032544: plastid translation | 4.97E-09 |
| 6 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 5.86E-07 |
| 7 | GO:0006412: translation | 4.31E-05 |
| 8 | GO:0010444: guard mother cell differentiation | 4.78E-05 |
| 9 | GO:0010027: thylakoid membrane organization | 8.61E-05 |
| 10 | GO:1903409: reactive oxygen species biosynthetic process | 1.06E-04 |
| 11 | GO:0043007: maintenance of rDNA | 1.06E-04 |
| 12 | GO:0080148: negative regulation of response to water deprivation | 2.48E-04 |
| 13 | GO:0009735: response to cytokinin | 2.99E-04 |
| 14 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 4.12E-04 |
| 15 | GO:0006954: inflammatory response | 4.12E-04 |
| 16 | GO:0006518: peptide metabolic process | 4.12E-04 |
| 17 | GO:0016556: mRNA modification | 5.92E-04 |
| 18 | GO:0055070: copper ion homeostasis | 5.92E-04 |
| 19 | GO:2001141: regulation of RNA biosynthetic process | 5.92E-04 |
| 20 | GO:0006749: glutathione metabolic process | 7.86E-04 |
| 21 | GO:0006808: regulation of nitrogen utilization | 7.86E-04 |
| 22 | GO:0006564: L-serine biosynthetic process | 9.92E-04 |
| 23 | GO:0045038: protein import into chloroplast thylakoid membrane | 9.92E-04 |
| 24 | GO:0035434: copper ion transmembrane transport | 9.92E-04 |
| 25 | GO:0009247: glycolipid biosynthetic process | 9.92E-04 |
| 26 | GO:0040008: regulation of growth | 1.10E-03 |
| 27 | GO:0006655: phosphatidylglycerol biosynthetic process | 1.21E-03 |
| 28 | GO:0010190: cytochrome b6f complex assembly | 1.21E-03 |
| 29 | GO:0016554: cytidine to uridine editing | 1.21E-03 |
| 30 | GO:0042372: phylloquinone biosynthetic process | 1.45E-03 |
| 31 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.45E-03 |
| 32 | GO:0000160: phosphorelay signal transduction system | 1.62E-03 |
| 33 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 1.70E-03 |
| 34 | GO:0009690: cytokinin metabolic process | 1.97E-03 |
| 35 | GO:0006605: protein targeting | 1.97E-03 |
| 36 | GO:0019375: galactolipid biosynthetic process | 1.97E-03 |
| 37 | GO:0009704: de-etiolation | 1.97E-03 |
| 38 | GO:0042254: ribosome biogenesis | 2.05E-03 |
| 39 | GO:0017004: cytochrome complex assembly | 2.24E-03 |
| 40 | GO:0071482: cellular response to light stimulus | 2.24E-03 |
| 41 | GO:0031146: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process | 2.84E-03 |
| 42 | GO:1900865: chloroplast RNA modification | 2.84E-03 |
| 43 | GO:0006535: cysteine biosynthetic process from serine | 3.15E-03 |
| 44 | GO:0009736: cytokinin-activated signaling pathway | 3.35E-03 |
| 45 | GO:0006415: translational termination | 3.47E-03 |
| 46 | GO:0009073: aromatic amino acid family biosynthetic process | 3.47E-03 |
| 47 | GO:0006352: DNA-templated transcription, initiation | 3.47E-03 |
| 48 | GO:0016024: CDP-diacylglycerol biosynthetic process | 3.81E-03 |
| 49 | GO:0050826: response to freezing | 4.16E-03 |
| 50 | GO:0009767: photosynthetic electron transport chain | 4.16E-03 |
| 51 | GO:0010207: photosystem II assembly | 4.52E-03 |
| 52 | GO:0019344: cysteine biosynthetic process | 5.65E-03 |
| 53 | GO:0019915: lipid storage | 6.46E-03 |
| 54 | GO:0042127: regulation of cell proliferation | 7.74E-03 |
| 55 | GO:0009306: protein secretion | 7.74E-03 |
| 56 | GO:0009741: response to brassinosteroid | 9.10E-03 |
| 57 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 1.06E-02 |
| 58 | GO:0032502: developmental process | 1.11E-02 |
| 59 | GO:0009567: double fertilization forming a zygote and endosperm | 1.21E-02 |
| 60 | GO:0009658: chloroplast organization | 1.27E-02 |
| 61 | GO:0009407: toxin catabolic process | 1.77E-02 |
| 62 | GO:0048527: lateral root development | 1.83E-02 |
| 63 | GO:0009793: embryo development ending in seed dormancy | 1.88E-02 |
| 64 | GO:0009637: response to blue light | 1.95E-02 |
| 65 | GO:0030001: metal ion transport | 2.14E-02 |
| 66 | GO:0006839: mitochondrial transport | 2.14E-02 |
| 67 | GO:0009640: photomorphogenesis | 2.34E-02 |
| 68 | GO:0010114: response to red light | 2.34E-02 |
| 69 | GO:0051707: response to other organism | 2.34E-02 |
| 70 | GO:0009636: response to toxic substance | 2.54E-02 |
| 71 | GO:0006855: drug transmembrane transport | 2.61E-02 |
| 72 | GO:0006096: glycolytic process | 3.26E-02 |
| 73 | GO:0048316: seed development | 3.33E-02 |
| 74 | GO:0009740: gibberellic acid mediated signaling pathway | 3.56E-02 |
| 75 | GO:0051726: regulation of cell cycle | 3.88E-02 |
| 76 | GO:0009742: brassinosteroid mediated signaling pathway | 3.88E-02 |
| 77 | GO:0055114: oxidation-reduction process | 4.23E-02 |
| 78 | GO:0009845: seed germination | 4.61E-02 |
| 79 | GO:0042744: hydrogen peroxide catabolic process | 4.78E-02 |
| 80 | GO:0009790: embryo development | 4.87E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 2 | GO:0005048: signal sequence binding | 0.00E+00 |
| 3 | GO:0019843: rRNA binding | 1.80E-07 |
| 4 | GO:0003735: structural constituent of ribosome | 7.10E-06 |
| 5 | GO:0001530: lipopolysaccharide binding | 1.06E-04 |
| 6 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 2.48E-04 |
| 7 | GO:0004617: phosphoglycerate dehydrogenase activity | 2.48E-04 |
| 8 | GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity | 2.48E-04 |
| 9 | GO:0004148: dihydrolipoyl dehydrogenase activity | 4.12E-04 |
| 10 | GO:0016531: copper chaperone activity | 4.12E-04 |
| 11 | GO:0019829: cation-transporting ATPase activity | 4.12E-04 |
| 12 | GO:0017150: tRNA dihydrouridine synthase activity | 4.12E-04 |
| 13 | GO:0035250: UDP-galactosyltransferase activity | 5.92E-04 |
| 14 | GO:0016149: translation release factor activity, codon specific | 5.92E-04 |
| 15 | GO:0008097: 5S rRNA binding | 5.92E-04 |
| 16 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 5.92E-04 |
| 17 | GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity | 7.86E-04 |
| 18 | GO:0001053: plastid sigma factor activity | 7.86E-04 |
| 19 | GO:0016836: hydro-lyase activity | 7.86E-04 |
| 20 | GO:0016987: sigma factor activity | 7.86E-04 |
| 21 | GO:0000156: phosphorelay response regulator activity | 9.50E-04 |
| 22 | GO:0016597: amino acid binding | 1.13E-03 |
| 23 | GO:0016208: AMP binding | 1.21E-03 |
| 24 | GO:0004124: cysteine synthase activity | 1.45E-03 |
| 25 | GO:0004033: aldo-keto reductase (NADP) activity | 1.97E-03 |
| 26 | GO:0008312: 7S RNA binding | 1.97E-03 |
| 27 | GO:0005375: copper ion transmembrane transporter activity | 2.24E-03 |
| 28 | GO:0003747: translation release factor activity | 2.53E-03 |
| 29 | GO:0047617: acyl-CoA hydrolase activity | 2.84E-03 |
| 30 | GO:0008794: arsenate reductase (glutaredoxin) activity | 3.47E-03 |
| 31 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 4.16E-03 |
| 32 | GO:0004022: alcohol dehydrogenase (NAD) activity | 4.16E-03 |
| 33 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 4.52E-03 |
| 34 | GO:0004519: endonuclease activity | 4.79E-03 |
| 35 | GO:0005528: FK506 binding | 5.65E-03 |
| 36 | GO:0010181: FMN binding | 9.58E-03 |
| 37 | GO:0048038: quinone binding | 1.06E-02 |
| 38 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.65E-02 |
| 39 | GO:0015238: drug transmembrane transporter activity | 1.71E-02 |
| 40 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 1.77E-02 |
| 41 | GO:0004222: metalloendopeptidase activity | 1.77E-02 |
| 42 | GO:0004364: glutathione transferase activity | 2.27E-02 |
| 43 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.47E-02 |
| 44 | GO:0009055: electron carrier activity | 2.50E-02 |
| 45 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.61E-02 |
| 46 | GO:0051287: NAD binding | 2.68E-02 |
| 47 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.89E-02 |
| 48 | GO:0016491: oxidoreductase activity | 3.07E-02 |
| 49 | GO:0015035: protein disulfide oxidoreductase activity | 3.80E-02 |
| 50 | GO:0016746: transferase activity, transferring acyl groups | 3.80E-02 |
| 51 | GO:0003723: RNA binding | 4.23E-02 |
| 52 | GO:0030170: pyridoxal phosphate binding | 4.70E-02 |
| 53 | GO:0015144: carbohydrate transmembrane transporter activity | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009571: proplastid stroma | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 2.73E-24 |
| 3 | GO:0009570: chloroplast stroma | 1.54E-17 |
| 4 | GO:0009941: chloroplast envelope | 3.20E-14 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 1.33E-06 |
| 6 | GO:0005840: ribosome | 5.85E-06 |
| 7 | GO:0009536: plastid | 7.65E-05 |
| 8 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 9.74E-05 |
| 9 | GO:0080085: signal recognition particle, chloroplast targeting | 2.48E-04 |
| 10 | GO:0000312: plastid small ribosomal subunit | 2.49E-04 |
| 11 | GO:0009509: chromoplast | 4.12E-04 |
| 12 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 2.24E-03 |
| 13 | GO:0009534: chloroplast thylakoid | 2.41E-03 |
| 14 | GO:0031969: chloroplast membrane | 2.63E-03 |
| 15 | GO:0009543: chloroplast thylakoid lumen | 5.94E-03 |
| 16 | GO:0022627: cytosolic small ribosomal subunit | 1.09E-02 |
| 17 | GO:0046658: anchored component of plasma membrane | 1.09E-02 |
| 18 | GO:0009295: nucleoid | 1.26E-02 |
| 19 | GO:0005778: peroxisomal membrane | 1.26E-02 |
| 20 | GO:0015934: large ribosomal subunit | 1.83E-02 |
| 21 | GO:0031977: thylakoid lumen | 2.21E-02 |
| 22 | GO:0043231: intracellular membrane-bounded organelle | 2.57E-02 |
| 23 | GO:0009706: chloroplast inner membrane | 3.72E-02 |
| 24 | GO:0010287: plastoglobule | 4.20E-02 |
| 25 | GO:0009579: thylakoid | 4.92E-02 |