Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G24560

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0043462: regulation of ATPase activity0.00E+00
2GO:0048024: regulation of mRNA splicing, via spliceosome0.00E+00
3GO:0036258: multivesicular body assembly0.00E+00
4GO:0006376: mRNA splice site selection3.25E-05
5GO:0031338: regulation of vesicle fusion3.25E-05
6GO:0046167: glycerol-3-phosphate biosynthetic process3.25E-05
7GO:0048363: mucilage pectin metabolic process3.25E-05
8GO:0006641: triglyceride metabolic process8.18E-05
9GO:0051258: protein polymerization8.18E-05
10GO:0019563: glycerol catabolic process1.42E-04
11GO:0090630: activation of GTPase activity1.42E-04
12GO:0006556: S-adenosylmethionine biosynthetic process1.42E-04
13GO:0070676: intralumenal vesicle formation2.11E-04
14GO:0001676: long-chain fatty acid metabolic process2.11E-04
15GO:0006072: glycerol-3-phosphate metabolic process2.11E-04
16GO:0080001: mucilage extrusion from seed coat2.11E-04
17GO:0010188: response to microbial phytotoxin2.85E-04
18GO:0006751: glutathione catabolic process4.48E-04
19GO:0006631: fatty acid metabolic process5.22E-04
20GO:0015937: coenzyme A biosynthetic process6.27E-04
21GO:0016559: peroxisome fission7.22E-04
22GO:0009827: plant-type cell wall modification8.20E-04
23GO:0016571: histone methylation1.02E-03
24GO:0010629: negative regulation of gene expression1.13E-03
25GO:0000266: mitochondrial fission1.36E-03
26GO:0006829: zinc II ion transport1.47E-03
27GO:0002237: response to molecule of bacterial origin1.60E-03
28GO:0007031: peroxisome organization1.72E-03
29GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process1.98E-03
30GO:0031408: oxylipin biosynthetic process2.26E-03
31GO:0003333: amino acid transmembrane transport2.26E-03
32GO:0006730: one-carbon metabolic process2.40E-03
33GO:0009693: ethylene biosynthetic process2.55E-03
34GO:0019722: calcium-mediated signaling2.69E-03
35GO:0055072: iron ion homeostasis3.47E-03
36GO:0009791: post-embryonic development3.47E-03
37GO:0071281: cellular response to iron ion3.97E-03
38GO:0015031: protein transport4.09E-03
39GO:0006914: autophagy4.14E-03
40GO:0009911: positive regulation of flower development4.67E-03
41GO:0048573: photoperiodism, flowering5.22E-03
42GO:0048767: root hair elongation5.80E-03
43GO:0010043: response to zinc ion6.19E-03
44GO:0009910: negative regulation of flower development6.19E-03
45GO:0030001: metal ion transport7.22E-03
46GO:0051707: response to other organism7.87E-03
47GO:0000209: protein polyubiquitination8.09E-03
48GO:0031347: regulation of defense response8.99E-03
49GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process8.99E-03
50GO:0016310: phosphorylation9.42E-03
51GO:0051603: proteolysis involved in cellular protein catabolic process9.93E-03
52GO:0006396: RNA processing1.27E-02
53GO:0010150: leaf senescence1.83E-02
54GO:0009617: response to bacterium2.07E-02
55GO:0007049: cell cycle2.70E-02
56GO:0005975: carbohydrate metabolic process2.70E-02
57GO:0046686: response to cadmium ion2.77E-02
58GO:0080167: response to karrikin2.91E-02
59GO:0016192: vesicle-mediated transport3.02E-02
60GO:0045892: negative regulation of transcription, DNA-templated3.34E-02
61GO:0006886: intracellular protein transport3.38E-02
62GO:0009408: response to heat3.84E-02
RankGO TermAdjusted P value
1GO:0004370: glycerol kinase activity0.00E+00
2GO:0017168: 5-oxoprolinase (ATP-hydrolyzing) activity0.00E+00
3GO:0016857: racemase and epimerase activity, acting on carbohydrates and derivatives0.00E+00
4GO:0043130: ubiquitin binding6.68E-05
5GO:0019200: carbohydrate kinase activity8.18E-05
6GO:0004103: choline kinase activity8.18E-05
7GO:0004594: pantothenate kinase activity8.18E-05
8GO:0004750: ribulose-phosphate 3-epimerase activity8.18E-05
9GO:0004478: methionine adenosyltransferase activity1.42E-04
10GO:0003995: acyl-CoA dehydrogenase activity2.85E-04
11GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen3.65E-04
12GO:0017137: Rab GTPase binding3.65E-04
13GO:0004869: cysteine-type endopeptidase inhibitor activity7.22E-04
14GO:0003729: mRNA binding9.02E-04
15GO:0015174: basic amino acid transmembrane transporter activity1.02E-03
16GO:0031072: heat shock protein binding1.47E-03
17GO:0004298: threonine-type endopeptidase activity2.26E-03
18GO:0019706: protein-cysteine S-palmitoyltransferase activity2.26E-03
19GO:0046873: metal ion transmembrane transporter activity3.15E-03
20GO:0051213: dioxygenase activity4.67E-03
21GO:0005096: GTPase activator activity5.80E-03
22GO:0003746: translation elongation factor activity6.60E-03
23GO:0035091: phosphatidylinositol binding8.31E-03
24GO:0005515: protein binding8.37E-03
25GO:0015171: amino acid transmembrane transporter activity1.04E-02
26GO:0005524: ATP binding1.08E-02
27GO:0051082: unfolded protein binding1.24E-02
28GO:0005516: calmodulin binding1.32E-02
29GO:0003676: nucleic acid binding1.82E-02
30GO:0008017: microtubule binding1.89E-02
31GO:0046983: protein dimerization activity2.38E-02
32GO:0004842: ubiquitin-protein transferase activity2.46E-02
33GO:0004601: peroxidase activity2.50E-02
34GO:0050660: flavin adenine dinucleotide binding2.77E-02
35GO:0008233: peptidase activity2.87E-02
36GO:0061630: ubiquitin protein ligase activity3.02E-02
37GO:0003924: GTPase activity3.84E-02
38GO:0003723: RNA binding4.04E-02
RankGO TermAdjusted P value
1GO:0035061: interchromatin granule8.18E-05
2GO:0000813: ESCRT I complex3.65E-04
3GO:0005829: cytosol5.42E-04
4GO:0012505: endomembrane system1.02E-03
5GO:0005839: proteasome core complex2.26E-03
6GO:0080008: Cul4-RING E3 ubiquitin ligase complex2.98E-03
7GO:0030529: intracellular ribonucleoprotein complex4.67E-03
8GO:0005737: cytoplasm7.25E-03
9GO:0031902: late endosome membrane7.43E-03
10GO:0000502: proteasome complex9.69E-03
11GO:0005777: peroxisome1.01E-02
12GO:0005681: spliceosomal complex1.09E-02
13GO:0016607: nuclear speck1.11E-02
14GO:0005834: heterotrimeric G-protein complex1.14E-02
15GO:0009705: plant-type vacuole membrane1.83E-02
<
Gene type



Gene DE type