Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G24200

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1900490: positive regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity0.00E+00
2GO:0071902: positive regulation of protein serine/threonine kinase activity2.30E-05
3GO:0090421: embryonic meristem initiation2.30E-05
4GO:0045931: positive regulation of mitotic cell cycle2.30E-05
5GO:0048208: COPII vesicle coating2.30E-05
6GO:0034728: nucleosome organization2.30E-05
7GO:0080136: priming of cellular response to stress2.30E-05
8GO:1900036: positive regulation of cellular response to heat2.30E-05
9GO:0016584: nucleosome positioning5.89E-05
10GO:0043631: RNA polyadenylation5.89E-05
11GO:0009660: amyloplast organization5.89E-05
12GO:0010506: regulation of autophagy1.04E-04
13GO:0071230: cellular response to amino acid stimulus1.04E-04
14GO:0007032: endosome organization1.04E-04
15GO:0031929: TOR signaling1.04E-04
16GO:0043044: ATP-dependent chromatin remodeling1.04E-04
17GO:2000038: regulation of stomatal complex development2.12E-04
18GO:0042594: response to starvation2.12E-04
19GO:0045723: positive regulation of fatty acid biosynthetic process2.12E-04
20GO:0016049: cell growth2.14E-04
21GO:0016558: protein import into peroxisome matrix2.73E-04
22GO:0009959: negative gravitropism3.37E-04
23GO:0009267: cellular response to starvation3.37E-04
24GO:0048364: root development3.73E-04
25GO:0009861: jasmonic acid and ethylene-dependent systemic resistance4.04E-04
26GO:2000037: regulation of stomatal complex patterning4.04E-04
27GO:0030307: positive regulation of cell growth4.74E-04
28GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway4.74E-04
29GO:0010120: camalexin biosynthetic process6.21E-04
30GO:0010204: defense response signaling pathway, resistance gene-independent6.21E-04
31GO:0006972: hyperosmotic response6.21E-04
32GO:0009880: embryonic pattern specification6.21E-04
33GO:0001708: cell fate specification6.98E-04
34GO:0010345: suberin biosynthetic process6.98E-04
35GO:0031146: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process7.77E-04
36GO:0009870: defense response signaling pathway, resistance gene-dependent8.59E-04
37GO:0009641: shade avoidance8.59E-04
38GO:0006378: mRNA polyadenylation9.42E-04
39GO:0008361: regulation of cell size1.03E-03
40GO:0010229: inflorescence development1.12E-03
41GO:0010540: basipetal auxin transport1.20E-03
42GO:0010143: cutin biosynthetic process1.20E-03
43GO:0010228: vegetative to reproductive phase transition of meristem1.22E-03
44GO:0007033: vacuole organization1.30E-03
45GO:0009901: anther dehiscence1.30E-03
46GO:0008380: RNA splicing1.38E-03
47GO:0010025: wax biosynthetic process1.39E-03
48GO:0042023: DNA endoreduplication1.39E-03
49GO:0008299: isoprenoid biosynthetic process1.59E-03
50GO:0042742: defense response to bacterium1.74E-03
51GO:0030433: ubiquitin-dependent ERAD pathway1.80E-03
52GO:0031348: negative regulation of defense response1.80E-03
53GO:0009294: DNA mediated transformation1.91E-03
54GO:0009625: response to insect1.91E-03
55GO:0010091: trichome branching2.02E-03
56GO:0048443: stamen development2.02E-03
57GO:0009561: megagametogenesis2.02E-03
58GO:0010118: stomatal movement2.24E-03
59GO:0042335: cuticle development2.24E-03
60GO:0006623: protein targeting to vacuole2.60E-03
61GO:0010183: pollen tube guidance2.60E-03
62GO:0000302: response to reactive oxygen species2.72E-03
63GO:0006635: fatty acid beta-oxidation2.72E-03
64GO:0048510: regulation of timing of transition from vegetative to reproductive phase2.72E-03
65GO:0006914: autophagy3.09E-03
66GO:0006397: mRNA processing3.35E-03
67GO:0048481: plant ovule development4.17E-03
68GO:0006499: N-terminal protein myristoylation4.46E-03
69GO:0010218: response to far red light4.46E-03
70GO:0009867: jasmonic acid mediated signaling pathway4.90E-03
71GO:0045087: innate immune response4.90E-03
72GO:0009908: flower development5.13E-03
73GO:0006897: endocytosis5.52E-03
74GO:0042542: response to hydrogen peroxide5.68E-03
75GO:0051301: cell division6.18E-03
76GO:0010224: response to UV-B7.35E-03
77GO:0009909: regulation of flower development7.70E-03
78GO:0009626: plant-type hypersensitive response8.42E-03
79GO:0009620: response to fungus8.61E-03
80GO:0016569: covalent chromatin modification8.79E-03
81GO:0009553: embryo sac development8.98E-03
82GO:0000398: mRNA splicing, via spliceosome1.01E-02
83GO:0010150: leaf senescence1.35E-02
84GO:0015031: protein transport1.46E-02
85GO:0010468: regulation of gene expression1.53E-02
86GO:0006970: response to osmotic stress1.94E-02
87GO:0007049: cell cycle1.99E-02
88GO:0009723: response to ethylene2.04E-02
89GO:0006468: protein phosphorylation2.31E-02
90GO:0045892: negative regulation of transcription, DNA-templated2.46E-02
91GO:0009793: embryo development ending in seed dormancy2.67E-02
92GO:0009751: response to salicylic acid2.80E-02
93GO:0006281: DNA repair2.83E-02
94GO:0009753: response to jasmonic acid2.97E-02
95GO:0050832: defense response to fungus3.42E-02
96GO:0006357: regulation of transcription from RNA polymerase II promoter3.45E-02
97GO:0016567: protein ubiquitination3.51E-02
98GO:0009734: auxin-activated signaling pathway3.61E-02
99GO:0009651: response to salt stress3.86E-02
100GO:0009555: pollen development4.25E-02
101GO:0009611: response to wounding4.32E-02
102GO:0035556: intracellular signal transduction4.42E-02
RankGO TermAdjusted P value
1GO:0045131: pre-mRNA branch point binding0.00E+00
2GO:0005515: protein binding6.67E-05
3GO:0004652: polynucleotide adenylyltransferase activity1.55E-04
4GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway2.12E-04
5GO:0031491: nucleosome binding4.04E-04
6GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides4.04E-04
7GO:0004672: protein kinase activity4.52E-04
8GO:0030674: protein binding, bridging5.46E-04
9GO:0031490: chromatin DNA binding7.77E-04
10GO:0008094: DNA-dependent ATPase activity1.70E-03
11GO:0004707: MAP kinase activity1.70E-03
12GO:0016779: nucleotidyltransferase activity1.80E-03
13GO:0003713: transcription coactivator activity2.36E-03
14GO:0004842: ubiquitin-protein transferase activity2.61E-03
15GO:0003746: translation elongation factor activity4.90E-03
16GO:0004712: protein serine/threonine/tyrosine kinase activity5.21E-03
17GO:0016874: ligase activity8.79E-03
18GO:0004386: helicase activity9.75E-03
19GO:0003682: chromatin binding1.91E-02
20GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting2.43E-02
21GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding2.63E-02
22GO:0005524: ATP binding2.88E-02
23GO:0008270: zinc ion binding3.28E-02
24GO:0016887: ATPase activity3.86E-02
25GO:0000166: nucleotide binding4.25E-02
26GO:0003676: nucleic acid binding4.73E-02
27GO:0003677: DNA binding4.75E-02
RankGO TermAdjusted P value
1GO:0031931: TORC1 complex1.04E-04
2GO:0005634: nucleus3.68E-04
3GO:0034045: pre-autophagosomal structure membrane6.21E-04
4GO:0009574: preprophase band1.12E-03
5GO:0030176: integral component of endoplasmic reticulum membrane1.30E-03
6GO:0005795: Golgi stack1.30E-03
7GO:0005770: late endosome2.36E-03
8GO:0005778: peroxisomal membrane3.22E-03
9GO:0019005: SCF ubiquitin ligase complex4.17E-03
10GO:0005681: spliceosomal complex8.06E-03
11GO:0005774: vacuolar membrane8.36E-03
12GO:0005802: trans-Golgi network9.08E-03
13GO:0005623: cell1.09E-02
14GO:0009524: phragmoplast1.11E-02
15GO:0080008: Cul4-RING E3 ubiquitin ligase complex1.96E-02
16GO:0005783: endoplasmic reticulum2.03E-02
17GO:0043231: intracellular membrane-bounded organelle3.03E-02
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Gene type



Gene DE type