GO Enrichment Analysis of Co-expressed Genes with
AT4G22120
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015805: S-adenosyl-L-methionine transport | 0.00E+00 |
| 2 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 3 | GO:0007638: mechanosensory behavior | 0.00E+00 |
| 4 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 5 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.35E-05 |
| 6 | GO:0016998: cell wall macromolecule catabolic process | 5.17E-05 |
| 7 | GO:0043266: regulation of potassium ion transport | 1.84E-04 |
| 8 | GO:0031338: regulation of vesicle fusion | 1.84E-04 |
| 9 | GO:0080051: cutin transport | 1.84E-04 |
| 10 | GO:2000021: regulation of ion homeostasis | 1.84E-04 |
| 11 | GO:0060627: regulation of vesicle-mediated transport | 1.84E-04 |
| 12 | GO:0006824: cobalt ion transport | 1.84E-04 |
| 13 | GO:0045717: negative regulation of fatty acid biosynthetic process | 4.15E-04 |
| 14 | GO:0015824: proline transport | 4.15E-04 |
| 15 | GO:0010289: homogalacturonan biosynthetic process | 4.15E-04 |
| 16 | GO:0010198: synergid death | 4.15E-04 |
| 17 | GO:0015908: fatty acid transport | 4.15E-04 |
| 18 | GO:0034755: iron ion transmembrane transport | 4.15E-04 |
| 19 | GO:0090630: activation of GTPase activity | 6.76E-04 |
| 20 | GO:0090506: axillary shoot meristem initiation | 6.76E-04 |
| 21 | GO:0010371: regulation of gibberellin biosynthetic process | 9.65E-04 |
| 22 | GO:0007231: osmosensory signaling pathway | 9.65E-04 |
| 23 | GO:0051639: actin filament network formation | 9.65E-04 |
| 24 | GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway | 1.28E-03 |
| 25 | GO:0010222: stem vascular tissue pattern formation | 1.28E-03 |
| 26 | GO:0051764: actin crosslink formation | 1.28E-03 |
| 27 | GO:0006552: leucine catabolic process | 1.28E-03 |
| 28 | GO:0033500: carbohydrate homeostasis | 1.28E-03 |
| 29 | GO:0031122: cytoplasmic microtubule organization | 1.28E-03 |
| 30 | GO:0045487: gibberellin catabolic process | 1.63E-03 |
| 31 | GO:0071554: cell wall organization or biogenesis | 1.74E-03 |
| 32 | GO:0006574: valine catabolic process | 2.01E-03 |
| 33 | GO:0010405: arabinogalactan protein metabolic process | 2.01E-03 |
| 34 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 2.01E-03 |
| 35 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 2.01E-03 |
| 36 | GO:0006655: phosphatidylglycerol biosynthetic process | 2.01E-03 |
| 37 | GO:0016042: lipid catabolic process | 2.32E-03 |
| 38 | GO:0009082: branched-chain amino acid biosynthetic process | 2.41E-03 |
| 39 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 2.41E-03 |
| 40 | GO:0010067: procambium histogenesis | 2.41E-03 |
| 41 | GO:0010027: thylakoid membrane organization | 2.50E-03 |
| 42 | GO:0006955: immune response | 2.83E-03 |
| 43 | GO:0009395: phospholipid catabolic process | 2.83E-03 |
| 44 | GO:0010411: xyloglucan metabolic process | 2.94E-03 |
| 45 | GO:0009704: de-etiolation | 3.28E-03 |
| 46 | GO:0016559: peroxisome fission | 3.28E-03 |
| 47 | GO:0071482: cellular response to light stimulus | 3.75E-03 |
| 48 | GO:0009657: plastid organization | 3.75E-03 |
| 49 | GO:0006754: ATP biosynthetic process | 4.25E-03 |
| 50 | GO:0006949: syncytium formation | 5.30E-03 |
| 51 | GO:0019538: protein metabolic process | 5.30E-03 |
| 52 | GO:0042546: cell wall biogenesis | 5.51E-03 |
| 53 | GO:0046856: phosphatidylinositol dephosphorylation | 5.85E-03 |
| 54 | GO:0006816: calcium ion transport | 5.85E-03 |
| 55 | GO:0006415: translational termination | 5.85E-03 |
| 56 | GO:0006820: anion transport | 6.43E-03 |
| 57 | GO:0016024: CDP-diacylglycerol biosynthetic process | 6.43E-03 |
| 58 | GO:0042538: hyperosmotic salinity response | 6.65E-03 |
| 59 | GO:0010588: cotyledon vascular tissue pattern formation | 7.03E-03 |
| 60 | GO:0010102: lateral root morphogenesis | 7.03E-03 |
| 61 | GO:0010223: secondary shoot formation | 7.64E-03 |
| 62 | GO:0048768: root hair cell tip growth | 7.64E-03 |
| 63 | GO:0010020: chloroplast fission | 7.64E-03 |
| 64 | GO:0071732: cellular response to nitric oxide | 8.27E-03 |
| 65 | GO:0070588: calcium ion transmembrane transport | 8.27E-03 |
| 66 | GO:0010025: wax biosynthetic process | 8.93E-03 |
| 67 | GO:0051017: actin filament bundle assembly | 9.60E-03 |
| 68 | GO:0008299: isoprenoid biosynthetic process | 1.03E-02 |
| 69 | GO:0006468: protein phosphorylation | 1.13E-02 |
| 70 | GO:0006629: lipid metabolic process | 1.14E-02 |
| 71 | GO:0071369: cellular response to ethylene stimulus | 1.25E-02 |
| 72 | GO:0001944: vasculature development | 1.25E-02 |
| 73 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.25E-02 |
| 74 | GO:0009306: protein secretion | 1.32E-02 |
| 75 | GO:0010089: xylem development | 1.32E-02 |
| 76 | GO:0016117: carotenoid biosynthetic process | 1.40E-02 |
| 77 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 1.40E-02 |
| 78 | GO:0010087: phloem or xylem histogenesis | 1.48E-02 |
| 79 | GO:0007623: circadian rhythm | 1.76E-02 |
| 80 | GO:0007264: small GTPase mediated signal transduction | 1.90E-02 |
| 81 | GO:0009739: response to gibberellin | 1.98E-02 |
| 82 | GO:0071281: cellular response to iron ion | 1.99E-02 |
| 83 | GO:0009828: plant-type cell wall loosening | 2.07E-02 |
| 84 | GO:0016125: sterol metabolic process | 2.07E-02 |
| 85 | GO:0016126: sterol biosynthetic process | 2.35E-02 |
| 86 | GO:0051301: cell division | 2.62E-02 |
| 87 | GO:0009658: chloroplast organization | 2.73E-02 |
| 88 | GO:0006865: amino acid transport | 3.26E-02 |
| 89 | GO:0016051: carbohydrate biosynthetic process | 3.36E-02 |
| 90 | GO:0006839: mitochondrial transport | 3.69E-02 |
| 91 | GO:0015979: photosynthesis | 3.86E-02 |
| 92 | GO:0010114: response to red light | 4.03E-02 |
| 93 | GO:0006886: intracellular protein transport | 4.17E-02 |
| 94 | GO:0009664: plant-type cell wall organization | 4.73E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004496: mevalonate kinase activity | 0.00E+00 |
| 2 | GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 0.00E+00 |
| 3 | GO:0001872: (1->3)-beta-D-glucan binding | 1.38E-05 |
| 4 | GO:0016788: hydrolase activity, acting on ester bonds | 1.80E-05 |
| 5 | GO:0015245: fatty acid transporter activity | 1.84E-04 |
| 6 | GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity | 1.84E-04 |
| 7 | GO:0042834: peptidoglycan binding | 1.84E-04 |
| 8 | GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity | 1.84E-04 |
| 9 | GO:0008568: microtubule-severing ATPase activity | 1.84E-04 |
| 10 | GO:0052689: carboxylic ester hydrolase activity | 2.95E-04 |
| 11 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 4.15E-04 |
| 12 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 4.15E-04 |
| 13 | GO:0015193: L-proline transmembrane transporter activity | 6.76E-04 |
| 14 | GO:0030267: glyoxylate reductase (NADP) activity | 6.76E-04 |
| 15 | GO:0070402: NADPH binding | 6.76E-04 |
| 16 | GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity | 6.76E-04 |
| 17 | GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity | 6.76E-04 |
| 18 | GO:0008893: guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity | 9.65E-04 |
| 19 | GO:0016149: translation release factor activity, codon specific | 9.65E-04 |
| 20 | GO:0052656: L-isoleucine transaminase activity | 9.65E-04 |
| 21 | GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity | 9.65E-04 |
| 22 | GO:0052654: L-leucine transaminase activity | 9.65E-04 |
| 23 | GO:0052655: L-valine transaminase activity | 9.65E-04 |
| 24 | GO:0004445: inositol-polyphosphate 5-phosphatase activity | 9.65E-04 |
| 25 | GO:0008526: phosphatidylinositol transporter activity | 1.28E-03 |
| 26 | GO:0016836: hydro-lyase activity | 1.28E-03 |
| 27 | GO:0052793: pectin acetylesterase activity | 1.28E-03 |
| 28 | GO:0004084: branched-chain-amino-acid transaminase activity | 1.28E-03 |
| 29 | GO:0008381: mechanically-gated ion channel activity | 1.63E-03 |
| 30 | GO:0019901: protein kinase binding | 1.63E-03 |
| 31 | GO:0017137: Rab GTPase binding | 1.63E-03 |
| 32 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.74E-03 |
| 33 | GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity | 2.01E-03 |
| 34 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 2.01E-03 |
| 35 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 2.01E-03 |
| 36 | GO:0016413: O-acetyltransferase activity | 2.36E-03 |
| 37 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 2.41E-03 |
| 38 | GO:0015631: tubulin binding | 2.41E-03 |
| 39 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 2.41E-03 |
| 40 | GO:0004672: protein kinase activity | 2.73E-03 |
| 41 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 2.94E-03 |
| 42 | GO:0030247: polysaccharide binding | 2.94E-03 |
| 43 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 4.25E-03 |
| 44 | GO:0003747: translation release factor activity | 4.25E-03 |
| 45 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 4.25E-03 |
| 46 | GO:0047617: acyl-CoA hydrolase activity | 4.76E-03 |
| 47 | GO:0005381: iron ion transmembrane transporter activity | 4.76E-03 |
| 48 | GO:0047372: acylglycerol lipase activity | 5.85E-03 |
| 49 | GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | 6.43E-03 |
| 50 | GO:0005262: calcium channel activity | 7.03E-03 |
| 51 | GO:0004565: beta-galactosidase activity | 7.03E-03 |
| 52 | GO:0005528: FK506 binding | 9.60E-03 |
| 53 | GO:0004674: protein serine/threonine kinase activity | 1.08E-02 |
| 54 | GO:0033612: receptor serine/threonine kinase binding | 1.10E-02 |
| 55 | GO:0003924: GTPase activity | 1.14E-02 |
| 56 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 1.17E-02 |
| 57 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.31E-02 |
| 58 | GO:0005102: receptor binding | 1.40E-02 |
| 59 | GO:0003713: transcription coactivator activity | 1.56E-02 |
| 60 | GO:0016853: isomerase activity | 1.64E-02 |
| 61 | GO:0008017: microtubule binding | 1.85E-02 |
| 62 | GO:0051015: actin filament binding | 1.99E-02 |
| 63 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 2.24E-02 |
| 64 | GO:0004721: phosphoprotein phosphatase activity | 2.64E-02 |
| 65 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.84E-02 |
| 66 | GO:0005096: GTPase activator activity | 2.94E-02 |
| 67 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 3.05E-02 |
| 68 | GO:0030145: manganese ion binding | 3.15E-02 |
| 69 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 3.32E-02 |
| 70 | GO:0004497: monooxygenase activity | 3.39E-02 |
| 71 | GO:0030246: carbohydrate binding | 3.40E-02 |
| 72 | GO:0003993: acid phosphatase activity | 3.47E-02 |
| 73 | GO:0005516: calmodulin binding | 3.90E-02 |
| 74 | GO:0004871: signal transducer activity | 4.24E-02 |
| 75 | GO:0005525: GTP binding | 4.35E-02 |
| 76 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.50E-02 |
| 77 | GO:0005524: ATP binding | 4.54E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005886: plasma membrane | 4.60E-05 |
| 2 | GO:0009897: external side of plasma membrane | 6.76E-04 |
| 3 | GO:0009507: chloroplast | 7.84E-04 |
| 4 | GO:0032432: actin filament bundle | 9.65E-04 |
| 5 | GO:0046658: anchored component of plasma membrane | 4.32E-03 |
| 6 | GO:0005884: actin filament | 5.85E-03 |
| 7 | GO:0009570: chloroplast stroma | 7.68E-03 |
| 8 | GO:0009534: chloroplast thylakoid | 7.73E-03 |
| 9 | GO:0009941: chloroplast envelope | 9.75E-03 |
| 10 | GO:0031225: anchored component of membrane | 1.14E-02 |
| 11 | GO:0010287: plastoglobule | 1.21E-02 |
| 12 | GO:0005768: endosome | 1.44E-02 |
| 13 | GO:0009535: chloroplast thylakoid membrane | 1.91E-02 |
| 14 | GO:0016021: integral component of membrane | 2.56E-02 |
| 15 | GO:0000139: Golgi membrane | 2.64E-02 |
| 16 | GO:0009707: chloroplast outer membrane | 2.84E-02 |
| 17 | GO:0031969: chloroplast membrane | 3.39E-02 |
| 18 | GO:0005819: spindle | 3.58E-02 |
| 19 | GO:0031977: thylakoid lumen | 3.80E-02 |
| 20 | GO:0005802: trans-Golgi network | 4.21E-02 |
| 21 | GO:0005618: cell wall | 4.91E-02 |