co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G21980

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1904215: regulation of protein import into chloroplast stroma	0.00E+00
2	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
3	GO:0000169: activation of MAPK activity involved in osmosensory signaling pathway	0.00E+00
4	GO:0032780: negative regulation of ATPase activity	0.00E+00
5	GO:0006212: uracil catabolic process	1.11E-06
6	GO:0019483: beta-alanine biosynthetic process	1.11E-06
7	GO:0006605: protein targeting	1.06E-04
8	GO:0043562: cellular response to nitrogen levels	1.33E-04
9	GO:0080173: male-female gamete recognition during double fertilization	1.50E-04
10	GO:0006481: C-terminal protein methylation	1.50E-04
11	GO:0080136: priming of cellular response to stress	1.50E-04
12	GO:0009738: abscisic acid-activated signaling pathway	1.50E-04
13	GO:0034214: protein hexamerization	1.50E-04
14	GO:0010201: response to continuous far red light stimulus by the high-irradiance response system	1.50E-04
15	GO:0048508: embryonic meristem development	1.50E-04
16	GO:0006805: xenobiotic metabolic process	1.50E-04
17	GO:0000303: response to superoxide	1.50E-04
18	GO:0019521: D-gluconate metabolic process	3.42E-04
19	GO:0006672: ceramide metabolic process	3.42E-04
20	GO:0009945: radial axis specification	3.42E-04
21	GO:1902000: homogentisate catabolic process	3.42E-04
22	GO:0019441: tryptophan catabolic process to kynurenine	3.42E-04
23	GO:0006996: organelle organization	3.42E-04
24	GO:1905182: positive regulation of urease activity	3.42E-04
25	GO:0006807: nitrogen compound metabolic process	3.54E-04
26	GO:0006470: protein dephosphorylation	3.95E-04
27	GO:0010359: regulation of anion channel activity	5.61E-04
28	GO:0061158: 3'-UTR-mediated mRNA destabilization	5.61E-04
29	GO:0071492: cellular response to UV-A	5.61E-04
30	GO:0009072: aromatic amino acid family metabolic process	5.61E-04
31	GO:0006970: response to osmotic stress	7.06E-04
32	GO:0051603: proteolysis involved in cellular protein catabolic process	7.14E-04
33	GO:0009723: response to ethylene	7.87E-04
34	GO:0006809: nitric oxide biosynthetic process	8.03E-04
35	GO:0071786: endoplasmic reticulum tubular network organization	8.03E-04
36	GO:0006624: vacuolar protein processing	8.03E-04
37	GO:2001289: lipid X metabolic process	8.03E-04
38	GO:2000038: regulation of stomatal complex development	1.06E-03
39	GO:0010188: response to microbial phytotoxin	1.06E-03
40	GO:0006878: cellular copper ion homeostasis	1.06E-03
41	GO:0071486: cellular response to high light intensity	1.06E-03
42	GO:1903830: magnesium ion transmembrane transport	1.06E-03
43	GO:0009765: photosynthesis, light harvesting	1.06E-03
44	GO:0045454: cell redox homeostasis	1.14E-03
45	GO:0015031: protein transport	1.15E-03
46	GO:0030308: negative regulation of cell growth	1.35E-03
47	GO:0006090: pyruvate metabolic process	1.35E-03
48	GO:0016094: polyprenol biosynthetic process	1.35E-03
49	GO:0006464: cellular protein modification process	1.58E-03
50	GO:0006914: autophagy	1.58E-03
51	GO:0010358: leaf shaping	1.65E-03
52	GO:0009267: cellular response to starvation	1.65E-03
53	GO:1902456: regulation of stomatal opening	1.65E-03
54	GO:0035435: phosphate ion transmembrane transport	1.65E-03
55	GO:0006751: glutathione catabolic process	1.65E-03
56	GO:0070814: hydrogen sulfide biosynthetic process	1.65E-03
57	GO:0051607: defense response to virus	1.78E-03
58	GO:0006694: steroid biosynthetic process	1.98E-03
59	GO:0009942: longitudinal axis specification	1.98E-03
60	GO:0048280: vesicle fusion with Golgi apparatus	1.98E-03
61	GO:2000037: regulation of stomatal complex patterning	1.98E-03
62	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	2.33E-03
63	GO:0006333: chromatin assembly or disassembly	2.33E-03
64	GO:0015693: magnesium ion transport	2.33E-03
65	GO:0050790: regulation of catalytic activity	2.33E-03
66	GO:0010044: response to aluminum ion	2.33E-03
67	GO:0009610: response to symbiotic fungus	2.33E-03
68	GO:0006955: immune response	2.33E-03
69	GO:0046470: phosphatidylcholine metabolic process	2.33E-03
70	GO:0043090: amino acid import	2.33E-03
71	GO:0009651: response to salt stress	2.50E-03
72	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	2.70E-03
73	GO:0009819: drought recovery	2.70E-03
74	GO:0016559: peroxisome fission	2.70E-03
75	GO:0010119: regulation of stomatal movement	2.82E-03
76	GO:0007568: aging	2.82E-03
77	GO:0006979: response to oxidative stress	2.88E-03
78	GO:0010120: camalexin biosynthetic process	3.08E-03
79	GO:0009808: lignin metabolic process	3.08E-03
80	GO:0009737: response to abscisic acid	3.19E-03
81	GO:0006098: pentose-phosphate shunt	3.49E-03
82	GO:0009821: alkaloid biosynthetic process	3.49E-03
83	GO:0051865: protein autoubiquitination	3.49E-03
84	GO:0006631: fatty acid metabolic process	3.67E-03
85	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	3.91E-03
86	GO:0008202: steroid metabolic process	3.91E-03
87	GO:0006896: Golgi to vacuole transport	4.35E-03
88	GO:0019538: protein metabolic process	4.35E-03
89	GO:0000103: sulfate assimilation	4.35E-03
90	GO:0043069: negative regulation of programmed cell death	4.35E-03
91	GO:0009636: response to toxic substance	4.47E-03
92	GO:0043085: positive regulation of catalytic activity	4.80E-03
93	GO:0046777: protein autophosphorylation	5.22E-03
94	GO:0045037: protein import into chloroplast stroma	5.27E-03
95	GO:0000266: mitochondrial fission	5.27E-03
96	GO:0012501: programmed cell death	5.27E-03
97	GO:0010102: lateral root morphogenesis	5.75E-03
98	GO:0010229: inflorescence development	5.75E-03
99	GO:0007034: vacuolar transport	6.25E-03
100	GO:0009626: plant-type hypersensitive response	6.74E-03
101	GO:0010167: response to nitrate	6.77E-03
102	GO:0034976: response to endoplasmic reticulum stress	7.30E-03
103	GO:0018105: peptidyl-serine phosphorylation	7.84E-03
104	GO:2000377: regulation of reactive oxygen species metabolic process	7.84E-03
105	GO:0007005: mitochondrion organization	9.56E-03
106	GO:0010091: trichome branching	1.08E-02
107	GO:0042147: retrograde transport, endosome to Golgi	1.14E-02
108	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.14E-02
109	GO:0042631: cellular response to water deprivation	1.20E-02
110	GO:0071472: cellular response to salt stress	1.27E-02
111	GO:0006662: glycerol ether metabolic process	1.27E-02
112	GO:0010197: polar nucleus fusion	1.27E-02
113	GO:0010150: leaf senescence	1.32E-02
114	GO:0048544: recognition of pollen	1.34E-02
115	GO:0061025: membrane fusion	1.34E-02
116	GO:0055114: oxidation-reduction process	1.39E-02
117	GO:0006623: protein targeting to vacuole	1.41E-02
118	GO:0010183: pollen tube guidance	1.41E-02
119	GO:0009749: response to glucose	1.41E-02
120	GO:0010193: response to ozone	1.47E-02
121	GO:0006891: intra-Golgi vesicle-mediated transport	1.47E-02
122	GO:0010583: response to cyclopentenone	1.55E-02
123	GO:0016032: viral process	1.55E-02
124	GO:0007264: small GTPase mediated signal transduction	1.55E-02
125	GO:0010468: regulation of gene expression	1.58E-02
126	GO:0009611: response to wounding	1.68E-02
127	GO:0035556: intracellular signal transduction	1.75E-02
128	GO:0009615: response to virus	1.92E-02
129	GO:0009816: defense response to bacterium, incompatible interaction	1.99E-02
130	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.99E-02
131	GO:0006888: ER to Golgi vesicle-mediated transport	2.15E-02
132	GO:0048481: plant ovule development	2.31E-02
133	GO:0006499: N-terminal protein myristoylation	2.48E-02
134	GO:0009407: toxin catabolic process	2.48E-02
135	GO:0010200: response to chitin	2.63E-02
136	GO:0006865: amino acid transport	2.65E-02
137	GO:0016192: vesicle-mediated transport	2.67E-02
138	GO:0009867: jasmonic acid mediated signaling pathway	2.74E-02
139	GO:0009853: photorespiration	2.74E-02
140	GO:0034599: cellular response to oxidative stress	2.83E-02
141	GO:0030001: metal ion transport	3.00E-02
142	GO:0045892: negative regulation of transcription, DNA-templated	3.09E-02
143	GO:0009751: response to salicylic acid	3.69E-02
144	GO:0009414: response to water deprivation	3.82E-02
145	GO:0009753: response to jasmonic acid	4.01E-02
146	GO:0006486: protein glycosylation	4.05E-02
147	GO:0010224: response to UV-B	4.15E-02
148	GO:0048367: shoot system development	4.67E-02
149	GO:0009873: ethylene-activated signaling pathway	4.81E-02
150	GO:0009620: response to fungus	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0004698: calcium-dependent protein kinase C activity	0.00E+00
2	GO:0050242: pyruvate, phosphate dikinase activity	0.00E+00
3	GO:0004157: dihydropyrimidinase activity	0.00E+00
4	GO:0042030: ATPase inhibitor activity	0.00E+00
5	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
6	GO:0003837: beta-ureidopropionase activity	0.00E+00
7	GO:0004197: cysteine-type endopeptidase activity	1.10E-04
8	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	1.50E-04
9	GO:0019786: Atg8-specific protease activity	1.50E-04
10	GO:0004671: protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity	1.50E-04
11	GO:0008794: arsenate reductase (glutaredoxin) activity	2.70E-04
12	GO:0019779: Atg8 activating enzyme activity	3.42E-04
13	GO:0004061: arylformamidase activity	3.42E-04
14	GO:0047209: coniferyl-alcohol glucosyltransferase activity	3.42E-04
15	GO:0004566: beta-glucuronidase activity	3.42E-04
16	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	5.61E-04
17	GO:0003840: gamma-glutamyltransferase activity	5.61E-04
18	GO:0036374: glutathione hydrolase activity	5.61E-04
19	GO:0004781: sulfate adenylyltransferase (ATP) activity	5.61E-04
20	GO:0016151: nickel cation binding	5.61E-04
21	GO:0005047: signal recognition particle binding	5.61E-04
22	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	8.03E-04
23	GO:0030527: structural constituent of chromatin	8.03E-04
24	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	8.03E-04
25	GO:0019776: Atg8 ligase activity	1.06E-03
26	GO:0016004: phospholipase activator activity	1.06E-03
27	GO:0004301: epoxide hydrolase activity	1.06E-03
28	GO:0015035: protein disulfide oxidoreductase activity	1.10E-03
29	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	1.35E-03
30	GO:0002094: polyprenyltransferase activity	1.35E-03
31	GO:0005496: steroid binding	1.35E-03
32	GO:0031386: protein tag	1.35E-03
33	GO:0003924: GTPase activity	1.56E-03
34	GO:0008420: CTD phosphatase activity	1.65E-03
35	GO:0005515: protein binding	1.82E-03
36	GO:0005525: GTP binding	1.97E-03
37	GO:0102391: decanoate--CoA ligase activity	1.98E-03
38	GO:0003950: NAD+ ADP-ribosyltransferase activity	1.98E-03
39	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	1.98E-03
40	GO:0004656: procollagen-proline 4-dioxygenase activity	1.98E-03
41	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	1.98E-03
42	GO:0004683: calmodulin-dependent protein kinase activity	2.21E-03
43	GO:0008320: protein transmembrane transporter activity	2.33E-03
44	GO:0004620: phospholipase activity	2.33E-03
45	GO:0004467: long-chain fatty acid-CoA ligase activity	2.33E-03
46	GO:0005509: calcium ion binding	2.46E-03
47	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	3.08E-03
48	GO:0008142: oxysterol binding	3.08E-03
49	GO:0004630: phospholipase D activity	3.08E-03
50	GO:0004364: glutathione transferase activity	3.82E-03
51	GO:0016844: strictosidine synthase activity	3.91E-03
52	GO:0004713: protein tyrosine kinase activity	4.35E-03
53	GO:0005315: inorganic phosphate transmembrane transporter activity	5.75E-03
54	GO:0015095: magnesium ion transmembrane transporter activity	5.75E-03
55	GO:0008234: cysteine-type peptidase activity	5.92E-03
56	GO:0004175: endopeptidase activity	6.25E-03
57	GO:0004722: protein serine/threonine phosphatase activity	6.77E-03
58	GO:0031418: L-ascorbic acid binding	7.84E-03
59	GO:0003954: NADH dehydrogenase activity	7.84E-03
60	GO:0004707: MAP kinase activity	8.97E-03
61	GO:0003756: protein disulfide isomerase activity	1.08E-02
62	GO:0003727: single-stranded RNA binding	1.08E-02
63	GO:0047134: protein-disulfide reductase activity	1.14E-02
64	GO:0046873: metal ion transmembrane transporter activity	1.27E-02
65	GO:0004791: thioredoxin-disulfide reductase activity	1.34E-02
66	GO:0016853: isomerase activity	1.34E-02
67	GO:0016887: ATPase activity	1.37E-02
68	GO:0008017: microtubule binding	1.38E-02
69	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.62E-02
70	GO:0005524: ATP binding	1.75E-02
71	GO:0008483: transaminase activity	1.76E-02
72	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.76E-02
73	GO:0051213: dioxygenase activity	1.92E-02
74	GO:0016168: chlorophyll binding	1.99E-02
75	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.07E-02
76	GO:0005096: GTPase activator activity	2.40E-02
77	GO:0005516: calmodulin binding	2.72E-02
78	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.74E-02
79	GO:0000149: SNARE binding	2.91E-02
80	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.91E-02
81	GO:0042803: protein homodimerization activity	3.18E-02
82	GO:0004871: signal transducer activity	3.18E-02
83	GO:0005484: SNAP receptor activity	3.28E-02
84	GO:0005198: structural molecule activity	3.56E-02
85	GO:0015293: symporter activity	3.56E-02
86	GO:0009055: electron carrier activity	4.01E-02
87	GO:0015171: amino acid transmembrane transporter activity	4.36E-02
88	GO:0045330: aspartyl esterase activity	4.36E-02
89	GO:0080043: quercetin 3-O-glucosyltransferase activity	4.88E-02
90	GO:0080044: quercetin 7-O-glucosyltransferase activity	4.88E-02
91	GO:0016874: ligase activity	4.99E-02
92	GO:0030599: pectinesterase activity	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0005785: signal recognition particle receptor complex	0.00E+00
3	GO:0005783: endoplasmic reticulum	4.84E-09
4	GO:0030139: endocytic vesicle	4.13E-06
5	GO:0005773: vacuole	6.29E-05
6	GO:0000421: autophagosome membrane	1.06E-04
7	GO:0005777: peroxisome	2.21E-04
8	GO:0031304: intrinsic component of mitochondrial inner membrane	3.42E-04
9	GO:0005764: lysosome	4.00E-04
10	GO:0031410: cytoplasmic vesicle	7.29E-04
11	GO:0032585: multivesicular body membrane	8.03E-04
12	GO:0000323: lytic vacuole	8.03E-04
13	GO:0071782: endoplasmic reticulum tubular network	8.03E-04
14	GO:0005775: vacuolar lumen	8.03E-04
15	GO:0005794: Golgi apparatus	1.23E-03
16	GO:0000164: protein phosphatase type 1 complex	1.35E-03
17	GO:0005789: endoplasmic reticulum membrane	1.65E-03
18	GO:0016363: nuclear matrix	1.98E-03
19	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	2.33E-03
20	GO:0005829: cytosol	2.55E-03
21	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	2.70E-03
22	GO:0012507: ER to Golgi transport vesicle membrane	2.70E-03
23	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	3.08E-03
24	GO:0031901: early endosome membrane	3.49E-03
25	GO:0031902: late endosome membrane	3.67E-03
26	GO:0005765: lysosomal membrane	4.80E-03
27	GO:0031966: mitochondrial membrane	4.99E-03
28	GO:0016602: CCAAT-binding factor complex	5.75E-03
29	GO:0005769: early endosome	7.30E-03
30	GO:0045271: respiratory chain complex I	8.40E-03
31	GO:0005741: mitochondrial outer membrane	8.97E-03
32	GO:0005768: endosome	9.28E-03
33	GO:0005623: cell	9.80E-03
34	GO:0030136: clathrin-coated vesicle	1.14E-02
35	GO:0009523: photosystem II	1.41E-02
36	GO:0005615: extracellular space	1.48E-02
37	GO:0005886: plasma membrane	1.54E-02
38	GO:0000785: chromatin	1.55E-02
39	GO:0071944: cell periphery	1.62E-02
40	GO:0032580: Golgi cisterna membrane	1.69E-02
41	GO:0005778: peroxisomal membrane	1.76E-02
42	GO:0005788: endoplasmic reticulum lumen	1.99E-02
43	GO:0009707: chloroplast outer membrane	2.31E-02
44	GO:0016021: integral component of membrane	2.33E-02
45	GO:0005774: vacuolar membrane	2.44E-02
46	GO:0005874: microtubule	2.45E-02
47	GO:0031201: SNARE complex	3.09E-02
48	GO:0005747: mitochondrial respiratory chain complex I	4.67E-02
49	GO:0010008: endosome membrane	4.67E-02