Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G21800

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0017186: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase0.00E+00
2GO:0042430: indole-containing compound metabolic process0.00E+00
3GO:0002376: immune system process0.00E+00
4GO:0070212: protein poly-ADP-ribosylation0.00E+00
5GO:0030149: sphingolipid catabolic process0.00E+00
6GO:1900367: positive regulation of defense response to insect0.00E+00
7GO:2000541: positive regulation of protein geranylgeranylation0.00E+00
8GO:0006616: SRP-dependent cotranslational protein targeting to membrane, translocation0.00E+00
9GO:0006182: cGMP biosynthetic process0.00E+00
10GO:0071327: cellular response to trehalose stimulus0.00E+00
11GO:0006468: protein phosphorylation4.83E-08
12GO:0006457: protein folding2.34E-07
13GO:0007166: cell surface receptor signaling pathway1.05E-06
14GO:0010942: positive regulation of cell death3.12E-06
15GO:0006101: citrate metabolic process6.00E-06
16GO:0006102: isocitrate metabolic process1.29E-05
17GO:0030968: endoplasmic reticulum unfolded protein response1.85E-05
18GO:0046686: response to cadmium ion2.00E-05
19GO:0072334: UDP-galactose transmembrane transport4.63E-05
20GO:0001676: long-chain fatty acid metabolic process4.63E-05
21GO:0010150: leaf senescence7.37E-05
22GO:0006952: defense response1.13E-04
23GO:0006097: glyoxylate cycle1.28E-04
24GO:0034976: response to endoplasmic reticulum stress1.43E-04
25GO:0043248: proteasome assembly1.84E-04
26GO:0016998: cell wall macromolecule catabolic process2.20E-04
27GO:0030433: ubiquitin-dependent ERAD pathway2.49E-04
28GO:0006099: tricarboxylic acid cycle2.57E-04
29GO:1900056: negative regulation of leaf senescence3.23E-04
30GO:1990641: response to iron ion starvation3.65E-04
31GO:0010726: positive regulation of hydrogen peroxide metabolic process3.65E-04
32GO:1901183: positive regulation of camalexin biosynthetic process3.65E-04
33GO:0060862: negative regulation of floral organ abscission3.65E-04
34GO:0042964: thioredoxin reduction3.65E-04
35GO:0035266: meristem growth3.65E-04
36GO:0007292: female gamete generation3.65E-04
37GO:0010193: response to ozone5.64E-04
38GO:0046685: response to arsenic-containing substance5.94E-04
39GO:0030163: protein catabolic process6.66E-04
40GO:0009408: response to heat7.41E-04
41GO:0019752: carboxylic acid metabolic process7.94E-04
42GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine7.94E-04
43GO:0051788: response to misfolded protein7.94E-04
44GO:0008535: respiratory chain complex IV assembly7.94E-04
45GO:0031349: positive regulation of defense response7.94E-04
46GO:0031204: posttranslational protein targeting to membrane, translocation7.94E-04
47GO:0080151: positive regulation of salicylic acid mediated signaling pathway7.94E-04
48GO:0009838: abscission7.94E-04
49GO:0080185: effector dependent induction by symbiont of host immune response7.94E-04
50GO:0010618: aerenchyma formation7.94E-04
51GO:0009626: plant-type hypersensitive response8.25E-04
52GO:0009615: response to virus8.99E-04
53GO:0009553: embryo sac development9.47E-04
54GO:0060968: regulation of gene silencing1.29E-03
55GO:0009062: fatty acid catabolic process1.29E-03
56GO:1900140: regulation of seedling development1.29E-03
57GO:0010581: regulation of starch biosynthetic process1.29E-03
58GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.29E-03
59GO:0055074: calcium ion homeostasis1.29E-03
60GO:0006499: N-terminal protein myristoylation1.42E-03
61GO:0010167: response to nitrate1.53E-03
62GO:0090351: seedling development1.53E-03
63GO:0070588: calcium ion transmembrane transport1.53E-03
64GO:0045087: innate immune response1.69E-03
65GO:0015696: ammonium transport1.85E-03
66GO:0009399: nitrogen fixation1.85E-03
67GO:0071323: cellular response to chitin1.85E-03
68GO:0000187: activation of MAPK activity1.85E-03
69GO:0048194: Golgi vesicle budding1.85E-03
70GO:0098542: defense response to other organism2.30E-03
71GO:0072488: ammonium transmembrane transport2.49E-03
72GO:2000038: regulation of stomatal complex development2.49E-03
73GO:0080142: regulation of salicylic acid biosynthetic process2.49E-03
74GO:0006542: glutamine biosynthetic process2.49E-03
75GO:0060548: negative regulation of cell death2.49E-03
76GO:0046345: abscisic acid catabolic process2.49E-03
77GO:2000022: regulation of jasmonic acid mediated signaling pathway2.51E-03
78GO:0010227: floral organ abscission2.74E-03
79GO:0042742: defense response to bacterium3.05E-03
80GO:0006979: response to oxidative stress3.10E-03
81GO:0045116: protein neddylation3.18E-03
82GO:0018344: protein geranylgeranylation3.18E-03
83GO:0010225: response to UV-C3.18E-03
84GO:0030041: actin filament polymerization3.18E-03
85GO:0046283: anthocyanin-containing compound metabolic process3.18E-03
86GO:0031365: N-terminal protein amino acid modification3.18E-03
87GO:0048232: male gamete generation3.93E-03
88GO:0018258: protein O-linked glycosylation via hydroxyproline3.93E-03
89GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly3.93E-03
90GO:0035435: phosphate ion transmembrane transport3.93E-03
91GO:0006561: proline biosynthetic process3.93E-03
92GO:0010405: arabinogalactan protein metabolic process3.93E-03
93GO:0048827: phyllome development3.93E-03
94GO:0010256: endomembrane system organization3.93E-03
95GO:0000302: response to reactive oxygen species4.65E-03
96GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response4.74E-03
97GO:0000911: cytokinesis by cell plate formation4.74E-03
98GO:0009612: response to mechanical stimulus4.74E-03
99GO:0010555: response to mannitol4.74E-03
100GO:2000037: regulation of stomatal complex patterning4.74E-03
101GO:0010310: regulation of hydrogen peroxide metabolic process4.74E-03
102GO:2000067: regulation of root morphogenesis4.74E-03
103GO:0009620: response to fungus4.77E-03
104GO:0007264: small GTPase mediated signal transduction4.96E-03
105GO:0015031: protein transport5.14E-03
106GO:0043090: amino acid import5.60E-03
107GO:0009567: double fertilization forming a zygote and endosperm5.63E-03
108GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline6.51E-03
109GO:0009850: auxin metabolic process6.51E-03
110GO:0009819: drought recovery6.51E-03
111GO:0010078: maintenance of root meristem identity6.51E-03
112GO:0030162: regulation of proteolysis6.51E-03
113GO:0009816: defense response to bacterium, incompatible interaction7.11E-03
114GO:0006075: (1->3)-beta-D-glucan biosynthetic process7.47E-03
115GO:0019430: removal of superoxide radicals7.47E-03
116GO:0010120: camalexin biosynthetic process7.47E-03
117GO:0007186: G-protein coupled receptor signaling pathway7.47E-03
118GO:0010204: defense response signaling pathway, resistance gene-independent7.47E-03
119GO:2000031: regulation of salicylic acid mediated signaling pathway7.47E-03
120GO:0042128: nitrate assimilation7.51E-03
121GO:0009627: systemic acquired resistance7.51E-03
122GO:0045454: cell redox homeostasis8.08E-03
123GO:0007338: single fertilization8.47E-03
124GO:0009821: alkaloid biosynthetic process8.47E-03
125GO:0015780: nucleotide-sugar transport8.47E-03
126GO:0008219: cell death8.79E-03
127GO:0090332: stomatal closure9.53E-03
128GO:0030042: actin filament depolymerization9.53E-03
129GO:0048268: clathrin coat assembly9.53E-03
130GO:0048354: mucilage biosynthetic process involved in seed coat development9.53E-03
131GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway9.53E-03
132GO:0008202: steroid metabolic process9.53E-03
133GO:1900426: positive regulation of defense response to bacterium9.53E-03
134GO:0009870: defense response signaling pathway, resistance gene-dependent1.06E-02
135GO:0000103: sulfate assimilation1.06E-02
136GO:0006032: chitin catabolic process1.06E-02
137GO:0048829: root cap development1.06E-02
138GO:0009750: response to fructose1.18E-02
139GO:0030148: sphingolipid biosynthetic process1.18E-02
140GO:0010015: root morphogenesis1.18E-02
141GO:0015706: nitrate transport1.30E-02
142GO:0002213: defense response to insect1.30E-02
143GO:0010105: negative regulation of ethylene-activated signaling pathway1.30E-02
144GO:0006631: fatty acid metabolic process1.33E-02
145GO:0009617: response to bacterium1.35E-02
146GO:0006508: proteolysis1.38E-02
147GO:0010229: inflorescence development1.42E-02
148GO:0009718: anthocyanin-containing compound biosynthetic process1.42E-02
149GO:0010075: regulation of meristem growth1.42E-02
150GO:0051707: response to other organism1.44E-02
151GO:0009933: meristem structural organization1.55E-02
152GO:0009934: regulation of meristem structural organization1.55E-02
153GO:0009965: leaf morphogenesis1.62E-02
154GO:0042343: indole glucosinolate metabolic process1.68E-02
155GO:0006855: drug transmembrane transport1.69E-02
156GO:0009651: response to salt stress1.69E-02
157GO:0006071: glycerol metabolic process1.81E-02
158GO:0000027: ribosomal large subunit assembly1.95E-02
159GO:0010187: negative regulation of seed germination1.95E-02
160GO:2000377: regulation of reactive oxygen species metabolic process1.95E-02
161GO:0005992: trehalose biosynthetic process1.95E-02
162GO:0006874: cellular calcium ion homeostasis2.09E-02
163GO:0009814: defense response, incompatible interaction2.38E-02
164GO:0007131: reciprocal meiotic recombination2.38E-02
165GO:0031348: negative regulation of defense response2.38E-02
166GO:0009625: response to insect2.54E-02
167GO:0010200: response to chitin2.57E-02
168GO:0009306: protein secretion2.69E-02
169GO:0019722: calcium-mediated signaling2.69E-02
170GO:0044550: secondary metabolite biosynthetic process2.73E-02
171GO:0009624: response to nematode2.78E-02
172GO:0008033: tRNA processing3.01E-02
173GO:0042391: regulation of membrane potential3.01E-02
174GO:0010118: stomatal movement3.01E-02
175GO:0008360: regulation of cell shape3.18E-02
176GO:0006520: cellular amino acid metabolic process3.18E-02
177GO:0006662: glycerol ether metabolic process3.18E-02
178GO:0010197: polar nucleus fusion3.18E-02
179GO:0048868: pollen tube development3.18E-02
180GO:0061025: membrane fusion3.35E-02
181GO:0006623: protein targeting to vacuole3.52E-02
182GO:0010183: pollen tube guidance3.52E-02
183GO:0009749: response to glucose3.52E-02
184GO:0006891: intra-Golgi vesicle-mediated transport3.69E-02
185GO:0002229: defense response to oomycetes3.69E-02
186GO:0006635: fatty acid beta-oxidation3.69E-02
187GO:0009737: response to abscisic acid3.85E-02
188GO:0009751: response to salicylic acid3.92E-02
189GO:0006511: ubiquitin-dependent protein catabolic process4.09E-02
190GO:0010252: auxin homeostasis4.23E-02
191GO:0001666: response to hypoxia4.80E-02
192GO:0055114: oxidation-reduction process4.92E-02
193GO:0009607: response to biotic stimulus4.99E-02
RankGO TermAdjusted P value
1GO:0008117: sphinganine-1-phosphate aldolase activity0.00E+00
2GO:0051670: inulinase activity0.00E+00
3GO:0005092: GDP-dissociation inhibitor activity0.00E+00
4GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity0.00E+00
5GO:0016603: glutaminyl-peptide cyclotransferase activity0.00E+00
6GO:0005524: ATP binding1.93E-10
7GO:0016301: kinase activity2.71E-08
8GO:0004674: protein serine/threonine kinase activity1.80E-07
9GO:0005459: UDP-galactose transmembrane transporter activity1.62E-06
10GO:0003994: aconitate hydratase activity6.00E-06
11GO:0051082: unfolded protein binding1.74E-05
12GO:0005093: Rab GDP-dissociation inhibitor activity2.10E-05
13GO:0005460: UDP-glucose transmembrane transporter activity4.63E-05
14GO:0005509: calcium ion binding5.53E-05
15GO:0004675: transmembrane receptor protein serine/threonine kinase activity6.18E-05
16GO:0002020: protease binding1.28E-04
17GO:0102391: decanoate--CoA ligase activity2.49E-04
18GO:0004467: long-chain fatty acid-CoA ligase activity3.23E-04
19GO:1901149: salicylic acid binding3.65E-04
20GO:0015085: calcium ion transmembrane transporter activity3.65E-04
21GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity3.65E-04
22GO:0080042: ADP-glucose pyrophosphohydrolase activity3.65E-04
23GO:0051669: fructan beta-fructosidase activity3.65E-04
24GO:0031219: levanase activity3.65E-04
25GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity3.65E-04
26GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity3.65E-04
27GO:0008809: carnitine racemase activity3.65E-04
28GO:0004714: transmembrane receptor protein tyrosine kinase activity4.05E-04
29GO:0017110: nucleoside-diphosphatase activity7.94E-04
30GO:0045140: inositol phosphoceramide synthase activity7.94E-04
31GO:0032934: sterol binding7.94E-04
32GO:0008517: folic acid transporter activity7.94E-04
33GO:0004566: beta-glucuronidase activity7.94E-04
34GO:0080041: ADP-ribose pyrophosphohydrolase activity7.94E-04
35GO:0019781: NEDD8 activating enzyme activity7.94E-04
36GO:0008559: xenobiotic-transporting ATPase activity9.42E-04
37GO:0005388: calcium-transporting ATPase activity1.22E-03
38GO:0004383: guanylate cyclase activity1.29E-03
39GO:0031683: G-protein beta/gamma-subunit complex binding1.29E-03
40GO:0001664: G-protein coupled receptor binding1.29E-03
41GO:0008061: chitin binding1.53E-03
42GO:0005516: calmodulin binding1.59E-03
43GO:0010178: IAA-amino acid conjugate hydrolase activity1.85E-03
44GO:0004449: isocitrate dehydrogenase (NAD+) activity1.85E-03
45GO:0004165: dodecenoyl-CoA delta-isomerase activity1.85E-03
46GO:0031176: endo-1,4-beta-xylanase activity1.85E-03
47GO:0051539: 4 iron, 4 sulfur cluster binding2.00E-03
48GO:0005086: ARF guanyl-nucleotide exchange factor activity2.49E-03
49GO:0003756: protein disulfide isomerase activity2.98E-03
50GO:0010294: abscisic acid glucosyltransferase activity3.18E-03
51GO:0008641: small protein activating enzyme activity3.18E-03
52GO:0047631: ADP-ribose diphosphatase activity3.18E-03
53GO:0017137: Rab GTPase binding3.18E-03
54GO:0004356: glutamate-ammonia ligase activity3.18E-03
55GO:0045431: flavonol synthase activity3.18E-03
56GO:0000210: NAD+ diphosphatase activity3.93E-03
57GO:0036402: proteasome-activating ATPase activity3.93E-03
58GO:0008519: ammonium transmembrane transporter activity3.93E-03
59GO:1990714: hydroxyproline O-galactosyltransferase activity3.93E-03
60GO:0010181: FMN binding4.05E-03
61GO:0004791: thioredoxin-disulfide reductase activity4.05E-03
62GO:0016853: isomerase activity4.05E-03
63GO:0030246: carbohydrate binding4.15E-03
64GO:0004012: phospholipid-translocating ATPase activity4.74E-03
65GO:0004656: procollagen-proline 4-dioxygenase activity4.74E-03
66GO:0016491: oxidoreductase activity5.55E-03
67GO:0016831: carboxy-lyase activity5.60E-03
68GO:0008235: metalloexopeptidase activity5.60E-03
69GO:0008237: metallopeptidase activity5.99E-03
70GO:0004708: MAP kinase kinase activity6.51E-03
71GO:0008135: translation factor activity, RNA binding7.47E-03
72GO:0008142: oxysterol binding7.47E-03
73GO:0003843: 1,3-beta-D-glucan synthase activity7.47E-03
74GO:0030247: polysaccharide binding7.93E-03
75GO:0004683: calmodulin-dependent protein kinase activity7.93E-03
76GO:0008889: glycerophosphodiester phosphodiesterase activity8.47E-03
77GO:0005515: protein binding9.15E-03
78GO:0046872: metal ion binding9.24E-03
79GO:0005096: GTPase activator activity9.24E-03
80GO:0045309: protein phosphorylated amino acid binding9.53E-03
81GO:0016844: strictosidine synthase activity9.53E-03
82GO:0015112: nitrate transmembrane transporter activity9.53E-03
83GO:0004713: protein tyrosine kinase activity1.06E-02
84GO:0004568: chitinase activity1.06E-02
85GO:0005545: 1-phosphatidylinositol binding1.06E-02
86GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.12E-02
87GO:0019904: protein domain specific binding1.18E-02
88GO:0004129: cytochrome-c oxidase activity1.18E-02
89GO:0004177: aminopeptidase activity1.18E-02
90GO:0008378: galactosyltransferase activity1.30E-02
91GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.42E-02
92GO:0005315: inorganic phosphate transmembrane transporter activity1.42E-02
93GO:0031072: heat shock protein binding1.42E-02
94GO:0005262: calcium channel activity1.42E-02
95GO:0030553: cGMP binding1.68E-02
96GO:0017025: TBP-class protein binding1.68E-02
97GO:0003712: transcription cofactor activity1.68E-02
98GO:0004970: ionotropic glutamate receptor activity1.68E-02
99GO:0005217: intracellular ligand-gated ion channel activity1.68E-02
100GO:0004190: aspartic-type endopeptidase activity1.68E-02
101GO:0030552: cAMP binding1.68E-02
102GO:0004672: protein kinase activity1.93E-02
103GO:0031418: L-ascorbic acid binding1.95E-02
104GO:0003954: NADH dehydrogenase activity1.95E-02
105GO:0005216: ion channel activity2.09E-02
106GO:0016887: ATPase activity2.14E-02
107GO:0031625: ubiquitin protein ligase binding2.16E-02
108GO:0004298: threonine-type endopeptidase activity2.24E-02
109GO:0033612: receptor serine/threonine kinase binding2.24E-02
110GO:0080044: quercetin 7-O-glucosyltransferase activity2.54E-02
111GO:0080043: quercetin 3-O-glucosyltransferase activity2.54E-02
112GO:0003779: actin binding2.70E-02
113GO:0047134: protein-disulfide reductase activity2.85E-02
114GO:0030551: cyclic nucleotide binding3.01E-02
115GO:0005249: voltage-gated potassium channel activity3.01E-02
116GO:0030276: clathrin binding3.18E-02
117GO:0016758: transferase activity, transferring hexosyl groups3.38E-02
118GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen3.39E-02
119GO:0004722: protein serine/threonine phosphatase activity3.45E-02
120GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor4.05E-02
121GO:0008565: protein transporter activity4.15E-02
122GO:0005507: copper ion binding4.38E-02
123GO:0008483: transaminase activity4.42E-02
124GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity4.42E-02
125GO:0016597: amino acid binding4.61E-02
126GO:0051213: dioxygenase activity4.80E-02
RankGO TermAdjusted P value
1GO:0005784: Sec61 translocon complex0.00E+00
2GO:0031205: endoplasmic reticulum Sec complex0.00E+00
3GO:0005886: plasma membrane5.43E-17
4GO:0005783: endoplasmic reticulum1.72E-11
5GO:0005788: endoplasmic reticulum lumen8.82E-09
6GO:0005774: vacuolar membrane4.30E-07
7GO:0016021: integral component of membrane3.04E-06
8GO:0009506: plasmodesma1.16E-04
9GO:0030176: integral component of endoplasmic reticulum membrane1.22E-04
10GO:0030173: integral component of Golgi membrane2.49E-04
11GO:0005789: endoplasmic reticulum membrane3.01E-04
12GO:0045252: oxoglutarate dehydrogenase complex3.65E-04
13GO:0005911: cell-cell junction3.65E-04
14GO:0005794: Golgi apparatus4.96E-04
15GO:0000502: proteasome complex5.79E-04
16GO:0005773: vacuole7.05E-04
17GO:0031304: intrinsic component of mitochondrial inner membrane7.94E-04
18GO:0008541: proteasome regulatory particle, lid subcomplex9.42E-04
19GO:0046861: glyoxysomal membrane1.29E-03
20GO:0005968: Rab-protein geranylgeranyltransferase complex1.85E-03
21GO:0009898: cytoplasmic side of plasma membrane2.49E-03
22GO:0005746: mitochondrial respiratory chain3.18E-03
23GO:0005829: cytosol3.68E-03
24GO:0009504: cell plate4.34E-03
25GO:0016363: nuclear matrix4.74E-03
26GO:0031597: cytosolic proteasome complex4.74E-03
27GO:0016592: mediator complex4.96E-03
28GO:0031595: nuclear proteasome complex5.60E-03
29GO:0009514: glyoxysome7.47E-03
30GO:0019773: proteasome core complex, alpha-subunit complex7.47E-03
31GO:0000148: 1,3-beta-D-glucan synthase complex7.47E-03
32GO:0030665: clathrin-coated vesicle membrane9.53E-03
33GO:0008540: proteasome regulatory particle, base subcomplex9.53E-03
34GO:0005777: peroxisome1.01E-02
35GO:0000325: plant-type vacuole1.02E-02
36GO:0005618: cell wall1.05E-02
37GO:0017119: Golgi transport complex1.06E-02
38GO:0090404: pollen tube tip1.18E-02
39GO:0005765: lysosomal membrane1.18E-02
40GO:0005795: Golgi stack1.68E-02
41GO:0005887: integral component of plasma membrane1.76E-02
42GO:0005839: proteasome core complex2.24E-02
43GO:0005905: clathrin-coated pit2.24E-02
44GO:0016020: membrane2.25E-02
45GO:0015629: actin cytoskeleton2.54E-02
46GO:0030136: clathrin-coated vesicle2.85E-02
47GO:0019898: extrinsic component of membrane3.52E-02
48GO:0009505: plant-type cell wall3.88E-02
49GO:0048046: apoplast4.58E-02
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Gene type



Gene DE type