Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G21400

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006182: cGMP biosynthetic process0.00E+00
2GO:0072722: response to amitrole0.00E+00
3GO:0002191: cap-dependent translational initiation0.00E+00
4GO:0006616: SRP-dependent cotranslational protein targeting to membrane, translocation0.00E+00
5GO:0042430: indole-containing compound metabolic process0.00E+00
6GO:2000541: positive regulation of protein geranylgeranylation0.00E+00
7GO:0042742: defense response to bacterium5.09E-12
8GO:0006457: protein folding1.69E-07
9GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response9.64E-07
10GO:0009617: response to bacterium8.64E-06
11GO:0046686: response to cadmium ion8.79E-06
12GO:0034976: response to endoplasmic reticulum stress3.29E-05
13GO:0055114: oxidation-reduction process4.11E-05
14GO:0009697: salicylic acid biosynthetic process4.22E-05
15GO:0010150: leaf senescence6.56E-05
16GO:0009751: response to salicylic acid8.31E-05
17GO:0009699: phenylpropanoid biosynthetic process1.85E-04
18GO:0010120: camalexin biosynthetic process1.85E-04
19GO:0034975: protein folding in endoplasmic reticulum1.86E-04
20GO:1990022: RNA polymerase III complex localization to nucleus1.86E-04
21GO:0042964: thioredoxin reduction1.86E-04
22GO:0046244: salicylic acid catabolic process1.86E-04
23GO:0044376: RNA polymerase II complex import to nucleus1.86E-04
24GO:0050691: regulation of defense response to virus by host1.86E-04
25GO:0006468: protein phosphorylation2.25E-04
26GO:0009627: systemic acquired resistance2.99E-04
27GO:0009682: induced systemic resistance3.66E-04
28GO:0009817: defense response to fungus, incompatible interaction3.68E-04
29GO:0031204: posttranslational protein targeting to membrane, translocation4.19E-04
30GO:0045901: positive regulation of translational elongation4.19E-04
31GO:0006452: translational frameshifting4.19E-04
32GO:0009866: induced systemic resistance, ethylene mediated signaling pathway4.19E-04
33GO:0044419: interspecies interaction between organisms4.19E-04
34GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine4.19E-04
35GO:0045905: positive regulation of translational termination4.19E-04
36GO:0006099: tricarboxylic acid cycle5.29E-04
37GO:0002237: response to molecule of bacterial origin5.38E-04
38GO:0010272: response to silver ion6.84E-04
39GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway6.84E-04
40GO:0055074: calcium ion homeostasis6.84E-04
41GO:0009062: fatty acid catabolic process6.84E-04
42GO:0006952: defense response7.00E-04
43GO:0098542: defense response to other organism8.93E-04
44GO:0016998: cell wall macromolecule catabolic process8.93E-04
45GO:0031348: negative regulation of defense response9.73E-04
46GO:0010116: positive regulation of abscisic acid biosynthetic process9.77E-04
47GO:0002239: response to oomycetes9.77E-04
48GO:0009306: protein secretion1.15E-03
49GO:0050832: defense response to fungus1.23E-03
50GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway1.29E-03
51GO:0009620: response to fungus1.38E-03
52GO:0018344: protein geranylgeranylation1.65E-03
53GO:0034052: positive regulation of plant-type hypersensitive response1.65E-03
54GO:0000304: response to singlet oxygen1.65E-03
55GO:0030041: actin filament polymerization1.65E-03
56GO:0046283: anthocyanin-containing compound metabolic process1.65E-03
57GO:0045454: cell redox homeostasis1.81E-03
58GO:0001731: formation of translation preinitiation complex2.03E-03
59GO:0010256: endomembrane system organization2.03E-03
60GO:0006561: proline biosynthetic process2.03E-03
61GO:0009567: double fertilization forming a zygote and endosperm2.14E-03
62GO:0042372: phylloquinone biosynthetic process2.43E-03
63GO:0009408: response to heat2.49E-03
64GO:0009615: response to virus2.54E-03
65GO:0006413: translational initiation2.83E-03
66GO:1900056: negative regulation of leaf senescence2.87E-03
67GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c2.87E-03
68GO:1902074: response to salt2.87E-03
69GO:0008219: cell death3.31E-03
70GO:0006102: isocitrate metabolic process3.32E-03
71GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline3.32E-03
72GO:0030091: protein repair3.32E-03
73GO:0006875: cellular metal ion homeostasis3.32E-03
74GO:0006499: N-terminal protein myristoylation3.64E-03
75GO:0019430: removal of superoxide radicals3.80E-03
76GO:0010204: defense response signaling pathway, resistance gene-independent3.80E-03
77GO:0045087: innate immune response4.19E-03
78GO:0009060: aerobic respiration4.30E-03
79GO:0007338: single fertilization4.30E-03
80GO:0046685: response to arsenic-containing substance4.30E-03
81GO:0010112: regulation of systemic acquired resistance4.30E-03
82GO:0090332: stomatal closure4.82E-03
83GO:0030042: actin filament depolymerization4.82E-03
84GO:0008202: steroid metabolic process4.82E-03
85GO:0006032: chitin catabolic process5.36E-03
86GO:0000272: polysaccharide catabolic process5.92E-03
87GO:0016485: protein processing5.92E-03
88GO:0006790: sulfur compound metabolic process6.51E-03
89GO:0002213: defense response to insect6.51E-03
90GO:0015706: nitrate transport6.51E-03
91GO:0031347: regulation of defense response6.52E-03
92GO:0009846: pollen germination6.76E-03
93GO:0009718: anthocyanin-containing compound biosynthetic process7.11E-03
94GO:0010075: regulation of meristem growth7.11E-03
95GO:0015031: protein transport7.41E-03
96GO:0009934: regulation of meristem structural organization7.73E-03
97GO:0010143: cutin biosynthetic process7.73E-03
98GO:0006446: regulation of translational initiation7.73E-03
99GO:0044550: secondary metabolite biosynthetic process7.87E-03
100GO:0046854: phosphatidylinositol phosphorylation8.37E-03
101GO:0042343: indole glucosinolate metabolic process8.37E-03
102GO:0010167: response to nitrate8.37E-03
103GO:0010025: wax biosynthetic process9.03E-03
104GO:0009626: plant-type hypersensitive response9.15E-03
105GO:0005992: trehalose biosynthetic process9.71E-03
106GO:0009863: salicylic acid mediated signaling pathway9.71E-03
107GO:0010187: negative regulation of seed germination9.71E-03
108GO:0006874: cellular calcium ion homeostasis1.04E-02
109GO:0003333: amino acid transmembrane transport1.11E-02
110GO:0071456: cellular response to hypoxia1.19E-02
111GO:0019748: secondary metabolic process1.19E-02
112GO:0030433: ubiquitin-dependent ERAD pathway1.19E-02
113GO:0010227: floral organ abscission1.26E-02
114GO:0010089: xylem development1.34E-02
115GO:0010584: pollen exine formation1.34E-02
116GO:0010118: stomatal movement1.50E-02
117GO:0008033: tRNA processing1.50E-02
118GO:0048868: pollen tube development1.58E-02
119GO:0010197: polar nucleus fusion1.58E-02
120GO:0006623: protein targeting to vacuole1.75E-02
121GO:0002229: defense response to oomycetes1.83E-02
122GO:0000302: response to reactive oxygen species1.83E-02
123GO:0006635: fatty acid beta-oxidation1.83E-02
124GO:0007264: small GTPase mediated signal transduction1.92E-02
125GO:0030163: protein catabolic process2.01E-02
126GO:0007166: cell surface receptor signaling pathway2.05E-02
127GO:0006464: cellular protein modification process2.10E-02
128GO:0016126: sterol biosynthetic process2.38E-02
129GO:0009607: response to biotic stimulus2.48E-02
130GO:0042128: nitrate assimilation2.58E-02
131GO:0009409: response to cold2.71E-02
132GO:0016311: dephosphorylation2.78E-02
133GO:0016049: cell growth2.78E-02
134GO:0006970: response to osmotic stress2.99E-02
135GO:0009407: toxin catabolic process3.08E-02
136GO:0007568: aging3.19E-02
137GO:0006865: amino acid transport3.30E-02
138GO:0046777: protein autophosphorylation3.68E-02
139GO:0006631: fatty acid metabolic process3.85E-02
140GO:0042542: response to hydrogen peroxide3.96E-02
141GO:0009636: response to toxic substance4.43E-02
142GO:0006869: lipid transport4.51E-02
143GO:0006855: drug transmembrane transport4.55E-02
144GO:0042538: hyperosmotic salinity response4.79E-02
145GO:0032259: methylation4.85E-02
RankGO TermAdjusted P value
1GO:0050269: coniferyl-aldehyde dehydrogenase activity0.00E+00
2GO:0046424: ferulate 5-hydroxylase activity0.00E+00
3GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
4GO:0004631: phosphomevalonate kinase activity0.00E+00
5GO:0005092: GDP-dissociation inhibitor activity0.00E+00
6GO:0098808: mRNA cap binding0.00E+00
7GO:0016312: inositol bisphosphate phosphatase activity0.00E+00
8GO:0016301: kinase activity3.65E-06
9GO:0004674: protein serine/threonine kinase activity7.91E-06
10GO:0051082: unfolded protein binding1.86E-05
11GO:0005524: ATP binding4.09E-05
12GO:0003756: protein disulfide isomerase activity7.97E-05
13GO:0008809: carnitine racemase activity1.86E-04
14GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity1.86E-04
15GO:0031957: very long-chain fatty acid-CoA ligase activity1.86E-04
16GO:0048037: cofactor binding1.86E-04
17GO:0008909: isochorismate synthase activity1.86E-04
18GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity1.86E-04
19GO:0005509: calcium ion binding2.82E-04
20GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen4.07E-04
21GO:0032934: sterol binding4.19E-04
22GO:0004775: succinate-CoA ligase (ADP-forming) activity4.19E-04
23GO:0004776: succinate-CoA ligase (GDP-forming) activity4.19E-04
24GO:0016614: oxidoreductase activity, acting on CH-OH group of donors4.45E-04
25GO:0000030: mannosyltransferase activity6.84E-04
26GO:0005093: Rab GDP-dissociation inhibitor activity6.84E-04
27GO:0004148: dihydrolipoyl dehydrogenase activity6.84E-04
28GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity6.84E-04
29GO:0004383: guanylate cyclase activity6.84E-04
30GO:0004449: isocitrate dehydrogenase (NAD+) activity9.77E-04
31GO:0004165: dodecenoyl-CoA delta-isomerase activity9.77E-04
32GO:0050660: flavin adenine dinucleotide binding1.24E-03
33GO:0005506: iron ion binding1.28E-03
34GO:0005086: ARF guanyl-nucleotide exchange factor activity1.29E-03
35GO:0010181: FMN binding1.54E-03
36GO:0002020: protease binding1.65E-03
37GO:0017137: Rab GTPase binding1.65E-03
38GO:0030976: thiamine pyrophosphate binding2.03E-03
39GO:0004029: aldehyde dehydrogenase (NAD) activity2.03E-03
40GO:0008113: peptide-methionine (S)-S-oxide reductase activity2.43E-03
41GO:0033743: peptide-methionine (R)-S-oxide reductase activity2.43E-03
42GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity2.43E-03
43GO:0102391: decanoate--CoA ligase activity2.43E-03
44GO:0004656: procollagen-proline 4-dioxygenase activity2.43E-03
45GO:0004467: long-chain fatty acid-CoA ligase activity2.87E-03
46GO:0004683: calmodulin-dependent protein kinase activity2.99E-03
47GO:0030247: polysaccharide binding2.99E-03
48GO:0008757: S-adenosylmethionine-dependent methyltransferase activity3.15E-03
49GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity3.31E-03
50GO:0043022: ribosome binding3.32E-03
51GO:0003743: translation initiation factor activity3.77E-03
52GO:0008135: translation factor activity, RNA binding3.80E-03
53GO:0008142: oxysterol binding3.80E-03
54GO:0050897: cobalt ion binding3.82E-03
55GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors4.19E-03
56GO:0003746: translation elongation factor activity4.19E-03
57GO:0015112: nitrate transmembrane transporter activity4.82E-03
58GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity4.82E-03
59GO:0004743: pyruvate kinase activity4.82E-03
60GO:0045309: protein phosphorylated amino acid binding4.82E-03
61GO:0030955: potassium ion binding4.82E-03
62GO:0004568: chitinase activity5.36E-03
63GO:0008559: xenobiotic-transporting ATPase activity5.92E-03
64GO:0019904: protein domain specific binding5.92E-03
65GO:0031072: heat shock protein binding7.11E-03
66GO:0004022: alcohol dehydrogenase (NAD) activity7.11E-03
67GO:0016491: oxidoreductase activity7.88E-03
68GO:0005217: intracellular ligand-gated ion channel activity8.37E-03
69GO:0008061: chitin binding8.37E-03
70GO:0004970: ionotropic glutamate receptor activity8.37E-03
71GO:0031418: L-ascorbic acid binding9.71E-03
72GO:0003779: actin binding1.00E-02
73GO:0019825: oxygen binding1.02E-02
74GO:0015035: protein disulfide oxidoreductase activity1.07E-02
75GO:0020037: heme binding1.08E-02
76GO:0005516: calmodulin binding1.11E-02
77GO:0004298: threonine-type endopeptidase activity1.11E-02
78GO:0009055: electron carrier activity1.27E-02
79GO:0004791: thioredoxin-disulfide reductase activity1.66E-02
80GO:0016853: isomerase activity1.66E-02
81GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor2.01E-02
82GO:0051213: dioxygenase activity2.38E-02
83GO:0009931: calcium-dependent protein serine/threonine kinase activity2.58E-02
84GO:0008168: methyltransferase activity2.68E-02
85GO:0015238: drug transmembrane transporter activity2.98E-02
86GO:0005096: GTPase activator activity2.98E-02
87GO:0043531: ADP binding3.05E-02
88GO:0004222: metalloendopeptidase activity3.08E-02
89GO:0030145: manganese ion binding3.19E-02
90GO:0004497: monooxygenase activity3.44E-02
91GO:0030246: carbohydrate binding3.47E-02
92GO:0004712: protein serine/threonine/tyrosine kinase activity3.63E-02
93GO:0051539: 4 iron, 4 sulfur cluster binding3.74E-02
94GO:0052689: carboxylic ester hydrolase activity3.80E-02
95GO:0004364: glutathione transferase activity3.96E-02
RankGO TermAdjusted P value
1GO:0031205: endoplasmic reticulum Sec complex0.00E+00
2GO:0005784: Sec61 translocon complex0.00E+00
3GO:0005783: endoplasmic reticulum1.23E-10
4GO:0005788: endoplasmic reticulum lumen1.29E-08
5GO:0005886: plasma membrane3.64E-07
6GO:0005774: vacuolar membrane4.06E-05
7GO:0005911: cell-cell junction1.86E-04
8GO:0045252: oxoglutarate dehydrogenase complex1.86E-04
9GO:0016021: integral component of membrane4.71E-04
10GO:0005968: Rab-protein geranylgeranyltransferase complex9.77E-04
11GO:0005829: cytosol9.87E-04
12GO:0009898: cytoplasmic side of plasma membrane1.29E-03
13GO:0016592: mediator complex1.89E-03
14GO:0016282: eukaryotic 43S preinitiation complex2.03E-03
15GO:0033290: eukaryotic 48S preinitiation complex2.43E-03
16GO:0005759: mitochondrial matrix2.74E-03
17GO:0019773: proteasome core complex, alpha-subunit complex3.80E-03
18GO:0000325: plant-type vacuole3.82E-03
19GO:0030665: clathrin-coated vesicle membrane4.82E-03
20GO:0017119: Golgi transport complex5.36E-03
21GO:0005750: mitochondrial respiratory chain complex III7.73E-03
22GO:0005758: mitochondrial intermembrane space9.71E-03
23GO:0005839: proteasome core complex1.11E-02
24GO:0005741: mitochondrial outer membrane1.11E-02
25GO:0016020: membrane1.14E-02
26GO:0015629: actin cytoskeleton1.26E-02
27GO:0048046: apoplast1.65E-02
28GO:0005618: cell wall1.94E-02
29GO:0005576: extracellular region2.20E-02
30GO:0009505: plant-type cell wall2.42E-02
31GO:0005737: cytoplasm2.77E-02
32GO:0005777: peroxisome2.85E-02
33GO:0005789: endoplasmic reticulum membrane3.24E-02
34GO:0005794: Golgi apparatus3.58E-02
35GO:0031902: late endosome membrane3.85E-02
36GO:0009506: plasmodesma3.87E-02
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Gene type



Gene DE type