GO Enrichment Analysis of Co-expressed Genes with
AT4G21400
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006182: cGMP biosynthetic process | 0.00E+00 |
| 2 | GO:0072722: response to amitrole | 0.00E+00 |
| 3 | GO:0002191: cap-dependent translational initiation | 0.00E+00 |
| 4 | GO:0006616: SRP-dependent cotranslational protein targeting to membrane, translocation | 0.00E+00 |
| 5 | GO:0042430: indole-containing compound metabolic process | 0.00E+00 |
| 6 | GO:2000541: positive regulation of protein geranylgeranylation | 0.00E+00 |
| 7 | GO:0042742: defense response to bacterium | 5.09E-12 |
| 8 | GO:0006457: protein folding | 1.69E-07 |
| 9 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 9.64E-07 |
| 10 | GO:0009617: response to bacterium | 8.64E-06 |
| 11 | GO:0046686: response to cadmium ion | 8.79E-06 |
| 12 | GO:0034976: response to endoplasmic reticulum stress | 3.29E-05 |
| 13 | GO:0055114: oxidation-reduction process | 4.11E-05 |
| 14 | GO:0009697: salicylic acid biosynthetic process | 4.22E-05 |
| 15 | GO:0010150: leaf senescence | 6.56E-05 |
| 16 | GO:0009751: response to salicylic acid | 8.31E-05 |
| 17 | GO:0009699: phenylpropanoid biosynthetic process | 1.85E-04 |
| 18 | GO:0010120: camalexin biosynthetic process | 1.85E-04 |
| 19 | GO:0034975: protein folding in endoplasmic reticulum | 1.86E-04 |
| 20 | GO:1990022: RNA polymerase III complex localization to nucleus | 1.86E-04 |
| 21 | GO:0042964: thioredoxin reduction | 1.86E-04 |
| 22 | GO:0046244: salicylic acid catabolic process | 1.86E-04 |
| 23 | GO:0044376: RNA polymerase II complex import to nucleus | 1.86E-04 |
| 24 | GO:0050691: regulation of defense response to virus by host | 1.86E-04 |
| 25 | GO:0006468: protein phosphorylation | 2.25E-04 |
| 26 | GO:0009627: systemic acquired resistance | 2.99E-04 |
| 27 | GO:0009682: induced systemic resistance | 3.66E-04 |
| 28 | GO:0009817: defense response to fungus, incompatible interaction | 3.68E-04 |
| 29 | GO:0031204: posttranslational protein targeting to membrane, translocation | 4.19E-04 |
| 30 | GO:0045901: positive regulation of translational elongation | 4.19E-04 |
| 31 | GO:0006452: translational frameshifting | 4.19E-04 |
| 32 | GO:0009866: induced systemic resistance, ethylene mediated signaling pathway | 4.19E-04 |
| 33 | GO:0044419: interspecies interaction between organisms | 4.19E-04 |
| 34 | GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine | 4.19E-04 |
| 35 | GO:0045905: positive regulation of translational termination | 4.19E-04 |
| 36 | GO:0006099: tricarboxylic acid cycle | 5.29E-04 |
| 37 | GO:0002237: response to molecule of bacterial origin | 5.38E-04 |
| 38 | GO:0010272: response to silver ion | 6.84E-04 |
| 39 | GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway | 6.84E-04 |
| 40 | GO:0055074: calcium ion homeostasis | 6.84E-04 |
| 41 | GO:0009062: fatty acid catabolic process | 6.84E-04 |
| 42 | GO:0006952: defense response | 7.00E-04 |
| 43 | GO:0098542: defense response to other organism | 8.93E-04 |
| 44 | GO:0016998: cell wall macromolecule catabolic process | 8.93E-04 |
| 45 | GO:0031348: negative regulation of defense response | 9.73E-04 |
| 46 | GO:0010116: positive regulation of abscisic acid biosynthetic process | 9.77E-04 |
| 47 | GO:0002239: response to oomycetes | 9.77E-04 |
| 48 | GO:0009306: protein secretion | 1.15E-03 |
| 49 | GO:0050832: defense response to fungus | 1.23E-03 |
| 50 | GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway | 1.29E-03 |
| 51 | GO:0009620: response to fungus | 1.38E-03 |
| 52 | GO:0018344: protein geranylgeranylation | 1.65E-03 |
| 53 | GO:0034052: positive regulation of plant-type hypersensitive response | 1.65E-03 |
| 54 | GO:0000304: response to singlet oxygen | 1.65E-03 |
| 55 | GO:0030041: actin filament polymerization | 1.65E-03 |
| 56 | GO:0046283: anthocyanin-containing compound metabolic process | 1.65E-03 |
| 57 | GO:0045454: cell redox homeostasis | 1.81E-03 |
| 58 | GO:0001731: formation of translation preinitiation complex | 2.03E-03 |
| 59 | GO:0010256: endomembrane system organization | 2.03E-03 |
| 60 | GO:0006561: proline biosynthetic process | 2.03E-03 |
| 61 | GO:0009567: double fertilization forming a zygote and endosperm | 2.14E-03 |
| 62 | GO:0042372: phylloquinone biosynthetic process | 2.43E-03 |
| 63 | GO:0009408: response to heat | 2.49E-03 |
| 64 | GO:0009615: response to virus | 2.54E-03 |
| 65 | GO:0006413: translational initiation | 2.83E-03 |
| 66 | GO:1900056: negative regulation of leaf senescence | 2.87E-03 |
| 67 | GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c | 2.87E-03 |
| 68 | GO:1902074: response to salt | 2.87E-03 |
| 69 | GO:0008219: cell death | 3.31E-03 |
| 70 | GO:0006102: isocitrate metabolic process | 3.32E-03 |
| 71 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 3.32E-03 |
| 72 | GO:0030091: protein repair | 3.32E-03 |
| 73 | GO:0006875: cellular metal ion homeostasis | 3.32E-03 |
| 74 | GO:0006499: N-terminal protein myristoylation | 3.64E-03 |
| 75 | GO:0019430: removal of superoxide radicals | 3.80E-03 |
| 76 | GO:0010204: defense response signaling pathway, resistance gene-independent | 3.80E-03 |
| 77 | GO:0045087: innate immune response | 4.19E-03 |
| 78 | GO:0009060: aerobic respiration | 4.30E-03 |
| 79 | GO:0007338: single fertilization | 4.30E-03 |
| 80 | GO:0046685: response to arsenic-containing substance | 4.30E-03 |
| 81 | GO:0010112: regulation of systemic acquired resistance | 4.30E-03 |
| 82 | GO:0090332: stomatal closure | 4.82E-03 |
| 83 | GO:0030042: actin filament depolymerization | 4.82E-03 |
| 84 | GO:0008202: steroid metabolic process | 4.82E-03 |
| 85 | GO:0006032: chitin catabolic process | 5.36E-03 |
| 86 | GO:0000272: polysaccharide catabolic process | 5.92E-03 |
| 87 | GO:0016485: protein processing | 5.92E-03 |
| 88 | GO:0006790: sulfur compound metabolic process | 6.51E-03 |
| 89 | GO:0002213: defense response to insect | 6.51E-03 |
| 90 | GO:0015706: nitrate transport | 6.51E-03 |
| 91 | GO:0031347: regulation of defense response | 6.52E-03 |
| 92 | GO:0009846: pollen germination | 6.76E-03 |
| 93 | GO:0009718: anthocyanin-containing compound biosynthetic process | 7.11E-03 |
| 94 | GO:0010075: regulation of meristem growth | 7.11E-03 |
| 95 | GO:0015031: protein transport | 7.41E-03 |
| 96 | GO:0009934: regulation of meristem structural organization | 7.73E-03 |
| 97 | GO:0010143: cutin biosynthetic process | 7.73E-03 |
| 98 | GO:0006446: regulation of translational initiation | 7.73E-03 |
| 99 | GO:0044550: secondary metabolite biosynthetic process | 7.87E-03 |
| 100 | GO:0046854: phosphatidylinositol phosphorylation | 8.37E-03 |
| 101 | GO:0042343: indole glucosinolate metabolic process | 8.37E-03 |
| 102 | GO:0010167: response to nitrate | 8.37E-03 |
| 103 | GO:0010025: wax biosynthetic process | 9.03E-03 |
| 104 | GO:0009626: plant-type hypersensitive response | 9.15E-03 |
| 105 | GO:0005992: trehalose biosynthetic process | 9.71E-03 |
| 106 | GO:0009863: salicylic acid mediated signaling pathway | 9.71E-03 |
| 107 | GO:0010187: negative regulation of seed germination | 9.71E-03 |
| 108 | GO:0006874: cellular calcium ion homeostasis | 1.04E-02 |
| 109 | GO:0003333: amino acid transmembrane transport | 1.11E-02 |
| 110 | GO:0071456: cellular response to hypoxia | 1.19E-02 |
| 111 | GO:0019748: secondary metabolic process | 1.19E-02 |
| 112 | GO:0030433: ubiquitin-dependent ERAD pathway | 1.19E-02 |
| 113 | GO:0010227: floral organ abscission | 1.26E-02 |
| 114 | GO:0010089: xylem development | 1.34E-02 |
| 115 | GO:0010584: pollen exine formation | 1.34E-02 |
| 116 | GO:0010118: stomatal movement | 1.50E-02 |
| 117 | GO:0008033: tRNA processing | 1.50E-02 |
| 118 | GO:0048868: pollen tube development | 1.58E-02 |
| 119 | GO:0010197: polar nucleus fusion | 1.58E-02 |
| 120 | GO:0006623: protein targeting to vacuole | 1.75E-02 |
| 121 | GO:0002229: defense response to oomycetes | 1.83E-02 |
| 122 | GO:0000302: response to reactive oxygen species | 1.83E-02 |
| 123 | GO:0006635: fatty acid beta-oxidation | 1.83E-02 |
| 124 | GO:0007264: small GTPase mediated signal transduction | 1.92E-02 |
| 125 | GO:0030163: protein catabolic process | 2.01E-02 |
| 126 | GO:0007166: cell surface receptor signaling pathway | 2.05E-02 |
| 127 | GO:0006464: cellular protein modification process | 2.10E-02 |
| 128 | GO:0016126: sterol biosynthetic process | 2.38E-02 |
| 129 | GO:0009607: response to biotic stimulus | 2.48E-02 |
| 130 | GO:0042128: nitrate assimilation | 2.58E-02 |
| 131 | GO:0009409: response to cold | 2.71E-02 |
| 132 | GO:0016311: dephosphorylation | 2.78E-02 |
| 133 | GO:0016049: cell growth | 2.78E-02 |
| 134 | GO:0006970: response to osmotic stress | 2.99E-02 |
| 135 | GO:0009407: toxin catabolic process | 3.08E-02 |
| 136 | GO:0007568: aging | 3.19E-02 |
| 137 | GO:0006865: amino acid transport | 3.30E-02 |
| 138 | GO:0046777: protein autophosphorylation | 3.68E-02 |
| 139 | GO:0006631: fatty acid metabolic process | 3.85E-02 |
| 140 | GO:0042542: response to hydrogen peroxide | 3.96E-02 |
| 141 | GO:0009636: response to toxic substance | 4.43E-02 |
| 142 | GO:0006869: lipid transport | 4.51E-02 |
| 143 | GO:0006855: drug transmembrane transport | 4.55E-02 |
| 144 | GO:0042538: hyperosmotic salinity response | 4.79E-02 |
| 145 | GO:0032259: methylation | 4.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050269: coniferyl-aldehyde dehydrogenase activity | 0.00E+00 |
| 2 | GO:0046424: ferulate 5-hydroxylase activity | 0.00E+00 |
| 3 | GO:0047720: indoleacetaldoxime dehydratase activity | 0.00E+00 |
| 4 | GO:0004631: phosphomevalonate kinase activity | 0.00E+00 |
| 5 | GO:0005092: GDP-dissociation inhibitor activity | 0.00E+00 |
| 6 | GO:0098808: mRNA cap binding | 0.00E+00 |
| 7 | GO:0016312: inositol bisphosphate phosphatase activity | 0.00E+00 |
| 8 | GO:0016301: kinase activity | 3.65E-06 |
| 9 | GO:0004674: protein serine/threonine kinase activity | 7.91E-06 |
| 10 | GO:0051082: unfolded protein binding | 1.86E-05 |
| 11 | GO:0005524: ATP binding | 4.09E-05 |
| 12 | GO:0003756: protein disulfide isomerase activity | 7.97E-05 |
| 13 | GO:0008809: carnitine racemase activity | 1.86E-04 |
| 14 | GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity | 1.86E-04 |
| 15 | GO:0031957: very long-chain fatty acid-CoA ligase activity | 1.86E-04 |
| 16 | GO:0048037: cofactor binding | 1.86E-04 |
| 17 | GO:0008909: isochorismate synthase activity | 1.86E-04 |
| 18 | GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity | 1.86E-04 |
| 19 | GO:0005509: calcium ion binding | 2.82E-04 |
| 20 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 4.07E-04 |
| 21 | GO:0032934: sterol binding | 4.19E-04 |
| 22 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 4.19E-04 |
| 23 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 4.19E-04 |
| 24 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 4.45E-04 |
| 25 | GO:0000030: mannosyltransferase activity | 6.84E-04 |
| 26 | GO:0005093: Rab GDP-dissociation inhibitor activity | 6.84E-04 |
| 27 | GO:0004148: dihydrolipoyl dehydrogenase activity | 6.84E-04 |
| 28 | GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity | 6.84E-04 |
| 29 | GO:0004383: guanylate cyclase activity | 6.84E-04 |
| 30 | GO:0004449: isocitrate dehydrogenase (NAD+) activity | 9.77E-04 |
| 31 | GO:0004165: dodecenoyl-CoA delta-isomerase activity | 9.77E-04 |
| 32 | GO:0050660: flavin adenine dinucleotide binding | 1.24E-03 |
| 33 | GO:0005506: iron ion binding | 1.28E-03 |
| 34 | GO:0005086: ARF guanyl-nucleotide exchange factor activity | 1.29E-03 |
| 35 | GO:0010181: FMN binding | 1.54E-03 |
| 36 | GO:0002020: protease binding | 1.65E-03 |
| 37 | GO:0017137: Rab GTPase binding | 1.65E-03 |
| 38 | GO:0030976: thiamine pyrophosphate binding | 2.03E-03 |
| 39 | GO:0004029: aldehyde dehydrogenase (NAD) activity | 2.03E-03 |
| 40 | GO:0008113: peptide-methionine (S)-S-oxide reductase activity | 2.43E-03 |
| 41 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 2.43E-03 |
| 42 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 2.43E-03 |
| 43 | GO:0102391: decanoate--CoA ligase activity | 2.43E-03 |
| 44 | GO:0004656: procollagen-proline 4-dioxygenase activity | 2.43E-03 |
| 45 | GO:0004467: long-chain fatty acid-CoA ligase activity | 2.87E-03 |
| 46 | GO:0004683: calmodulin-dependent protein kinase activity | 2.99E-03 |
| 47 | GO:0030247: polysaccharide binding | 2.99E-03 |
| 48 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 3.15E-03 |
| 49 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 3.31E-03 |
| 50 | GO:0043022: ribosome binding | 3.32E-03 |
| 51 | GO:0003743: translation initiation factor activity | 3.77E-03 |
| 52 | GO:0008135: translation factor activity, RNA binding | 3.80E-03 |
| 53 | GO:0008142: oxysterol binding | 3.80E-03 |
| 54 | GO:0050897: cobalt ion binding | 3.82E-03 |
| 55 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 4.19E-03 |
| 56 | GO:0003746: translation elongation factor activity | 4.19E-03 |
| 57 | GO:0015112: nitrate transmembrane transporter activity | 4.82E-03 |
| 58 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 4.82E-03 |
| 59 | GO:0004743: pyruvate kinase activity | 4.82E-03 |
| 60 | GO:0045309: protein phosphorylated amino acid binding | 4.82E-03 |
| 61 | GO:0030955: potassium ion binding | 4.82E-03 |
| 62 | GO:0004568: chitinase activity | 5.36E-03 |
| 63 | GO:0008559: xenobiotic-transporting ATPase activity | 5.92E-03 |
| 64 | GO:0019904: protein domain specific binding | 5.92E-03 |
| 65 | GO:0031072: heat shock protein binding | 7.11E-03 |
| 66 | GO:0004022: alcohol dehydrogenase (NAD) activity | 7.11E-03 |
| 67 | GO:0016491: oxidoreductase activity | 7.88E-03 |
| 68 | GO:0005217: intracellular ligand-gated ion channel activity | 8.37E-03 |
| 69 | GO:0008061: chitin binding | 8.37E-03 |
| 70 | GO:0004970: ionotropic glutamate receptor activity | 8.37E-03 |
| 71 | GO:0031418: L-ascorbic acid binding | 9.71E-03 |
| 72 | GO:0003779: actin binding | 1.00E-02 |
| 73 | GO:0019825: oxygen binding | 1.02E-02 |
| 74 | GO:0015035: protein disulfide oxidoreductase activity | 1.07E-02 |
| 75 | GO:0020037: heme binding | 1.08E-02 |
| 76 | GO:0005516: calmodulin binding | 1.11E-02 |
| 77 | GO:0004298: threonine-type endopeptidase activity | 1.11E-02 |
| 78 | GO:0009055: electron carrier activity | 1.27E-02 |
| 79 | GO:0004791: thioredoxin-disulfide reductase activity | 1.66E-02 |
| 80 | GO:0016853: isomerase activity | 1.66E-02 |
| 81 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 2.01E-02 |
| 82 | GO:0051213: dioxygenase activity | 2.38E-02 |
| 83 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 2.58E-02 |
| 84 | GO:0008168: methyltransferase activity | 2.68E-02 |
| 85 | GO:0015238: drug transmembrane transporter activity | 2.98E-02 |
| 86 | GO:0005096: GTPase activator activity | 2.98E-02 |
| 87 | GO:0043531: ADP binding | 3.05E-02 |
| 88 | GO:0004222: metalloendopeptidase activity | 3.08E-02 |
| 89 | GO:0030145: manganese ion binding | 3.19E-02 |
| 90 | GO:0004497: monooxygenase activity | 3.44E-02 |
| 91 | GO:0030246: carbohydrate binding | 3.47E-02 |
| 92 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 3.63E-02 |
| 93 | GO:0051539: 4 iron, 4 sulfur cluster binding | 3.74E-02 |
| 94 | GO:0052689: carboxylic ester hydrolase activity | 3.80E-02 |
| 95 | GO:0004364: glutathione transferase activity | 3.96E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0031205: endoplasmic reticulum Sec complex | 0.00E+00 |
| 2 | GO:0005784: Sec61 translocon complex | 0.00E+00 |
| 3 | GO:0005783: endoplasmic reticulum | 1.23E-10 |
| 4 | GO:0005788: endoplasmic reticulum lumen | 1.29E-08 |
| 5 | GO:0005886: plasma membrane | 3.64E-07 |
| 6 | GO:0005774: vacuolar membrane | 4.06E-05 |
| 7 | GO:0005911: cell-cell junction | 1.86E-04 |
| 8 | GO:0045252: oxoglutarate dehydrogenase complex | 1.86E-04 |
| 9 | GO:0016021: integral component of membrane | 4.71E-04 |
| 10 | GO:0005968: Rab-protein geranylgeranyltransferase complex | 9.77E-04 |
| 11 | GO:0005829: cytosol | 9.87E-04 |
| 12 | GO:0009898: cytoplasmic side of plasma membrane | 1.29E-03 |
| 13 | GO:0016592: mediator complex | 1.89E-03 |
| 14 | GO:0016282: eukaryotic 43S preinitiation complex | 2.03E-03 |
| 15 | GO:0033290: eukaryotic 48S preinitiation complex | 2.43E-03 |
| 16 | GO:0005759: mitochondrial matrix | 2.74E-03 |
| 17 | GO:0019773: proteasome core complex, alpha-subunit complex | 3.80E-03 |
| 18 | GO:0000325: plant-type vacuole | 3.82E-03 |
| 19 | GO:0030665: clathrin-coated vesicle membrane | 4.82E-03 |
| 20 | GO:0017119: Golgi transport complex | 5.36E-03 |
| 21 | GO:0005750: mitochondrial respiratory chain complex III | 7.73E-03 |
| 22 | GO:0005758: mitochondrial intermembrane space | 9.71E-03 |
| 23 | GO:0005839: proteasome core complex | 1.11E-02 |
| 24 | GO:0005741: mitochondrial outer membrane | 1.11E-02 |
| 25 | GO:0016020: membrane | 1.14E-02 |
| 26 | GO:0015629: actin cytoskeleton | 1.26E-02 |
| 27 | GO:0048046: apoplast | 1.65E-02 |
| 28 | GO:0005618: cell wall | 1.94E-02 |
| 29 | GO:0005576: extracellular region | 2.20E-02 |
| 30 | GO:0009505: plant-type cell wall | 2.42E-02 |
| 31 | GO:0005737: cytoplasm | 2.77E-02 |
| 32 | GO:0005777: peroxisome | 2.85E-02 |
| 33 | GO:0005789: endoplasmic reticulum membrane | 3.24E-02 |
| 34 | GO:0005794: Golgi apparatus | 3.58E-02 |
| 35 | GO:0031902: late endosome membrane | 3.85E-02 |
| 36 | GO:0009506: plasmodesma | 3.87E-02 |