GO Enrichment Analysis of Co-expressed Genes with
AT4G21190
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation | 0.00E+00 |
| 2 | GO:0018023: peptidyl-lysine trimethylation | 0.00E+00 |
| 3 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 4 | GO:0006655: phosphatidylglycerol biosynthetic process | 7.64E-06 |
| 5 | GO:0032544: plastid translation | 2.60E-05 |
| 6 | GO:0046467: membrane lipid biosynthetic process | 5.18E-05 |
| 7 | GO:1904966: positive regulation of vitamin E biosynthetic process | 5.18E-05 |
| 8 | GO:1904964: positive regulation of phytol biosynthetic process | 5.18E-05 |
| 9 | GO:0071461: cellular response to redox state | 5.18E-05 |
| 10 | GO:1902458: positive regulation of stomatal opening | 5.18E-05 |
| 11 | GO:0019684: photosynthesis, light reaction | 5.75E-05 |
| 12 | GO:0016024: CDP-diacylglycerol biosynthetic process | 6.74E-05 |
| 13 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 1.27E-04 |
| 14 | GO:0080005: photosystem stoichiometry adjustment | 1.27E-04 |
| 15 | GO:0018026: peptidyl-lysine monomethylation | 1.27E-04 |
| 16 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 1.27E-04 |
| 17 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 1.27E-04 |
| 18 | GO:0016556: mRNA modification | 3.17E-04 |
| 19 | GO:0006424: glutamyl-tRNA aminoacylation | 3.17E-04 |
| 20 | GO:2001141: regulation of RNA biosynthetic process | 3.17E-04 |
| 21 | GO:0032543: mitochondrial translation | 5.39E-04 |
| 22 | GO:0045038: protein import into chloroplast thylakoid membrane | 5.39E-04 |
| 23 | GO:0009658: chloroplast organization | 6.13E-04 |
| 24 | GO:0016554: cytidine to uridine editing | 6.60E-04 |
| 25 | GO:0010190: cytochrome b6f complex assembly | 6.60E-04 |
| 26 | GO:0042026: protein refolding | 7.87E-04 |
| 27 | GO:0006458: 'de novo' protein folding | 7.87E-04 |
| 28 | GO:0010019: chloroplast-nucleus signaling pathway | 7.87E-04 |
| 29 | GO:0009395: phospholipid catabolic process | 9.18E-04 |
| 30 | GO:0015979: photosynthesis | 9.42E-04 |
| 31 | GO:0042255: ribosome assembly | 1.06E-03 |
| 32 | GO:0006353: DNA-templated transcription, termination | 1.06E-03 |
| 33 | GO:2000070: regulation of response to water deprivation | 1.06E-03 |
| 34 | GO:0048564: photosystem I assembly | 1.06E-03 |
| 35 | GO:0071482: cellular response to light stimulus | 1.20E-03 |
| 36 | GO:0000373: Group II intron splicing | 1.35E-03 |
| 37 | GO:1900865: chloroplast RNA modification | 1.50E-03 |
| 38 | GO:0010205: photoinhibition | 1.50E-03 |
| 39 | GO:0006415: translational termination | 1.84E-03 |
| 40 | GO:0009089: lysine biosynthetic process via diaminopimelate | 1.84E-03 |
| 41 | GO:0009073: aromatic amino acid family biosynthetic process | 1.84E-03 |
| 42 | GO:0006352: DNA-templated transcription, initiation | 1.84E-03 |
| 43 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.84E-03 |
| 44 | GO:0009767: photosynthetic electron transport chain | 2.19E-03 |
| 45 | GO:0010207: photosystem II assembly | 2.38E-03 |
| 46 | GO:0006636: unsaturated fatty acid biosynthetic process | 2.76E-03 |
| 47 | GO:0009451: RNA modification | 3.26E-03 |
| 48 | GO:0061077: chaperone-mediated protein folding | 3.37E-03 |
| 49 | GO:0009306: protein secretion | 4.03E-03 |
| 50 | GO:0016117: carotenoid biosynthetic process | 4.26E-03 |
| 51 | GO:0008033: tRNA processing | 4.49E-03 |
| 52 | GO:0000413: protein peptidyl-prolyl isomerization | 4.49E-03 |
| 53 | GO:0042254: ribosome biogenesis | 5.00E-03 |
| 54 | GO:0032502: developmental process | 5.71E-03 |
| 55 | GO:0010027: thylakoid membrane organization | 7.04E-03 |
| 56 | GO:0015995: chlorophyll biosynthetic process | 7.88E-03 |
| 57 | GO:0009817: defense response to fungus, incompatible interaction | 8.46E-03 |
| 58 | GO:0018298: protein-chromophore linkage | 8.46E-03 |
| 59 | GO:0009407: toxin catabolic process | 9.06E-03 |
| 60 | GO:0007568: aging | 9.36E-03 |
| 61 | GO:0034599: cellular response to oxidative stress | 1.03E-02 |
| 62 | GO:0006810: transport | 1.06E-02 |
| 63 | GO:0009636: response to toxic substance | 1.30E-02 |
| 64 | GO:0043086: negative regulation of catalytic activity | 1.66E-02 |
| 65 | GO:0048316: seed development | 1.70E-02 |
| 66 | GO:0006457: protein folding | 2.07E-02 |
| 67 | GO:0009790: embryo development | 2.48E-02 |
| 68 | GO:0006633: fatty acid biosynthetic process | 2.61E-02 |
| 69 | GO:0040008: regulation of growth | 2.70E-02 |
| 70 | GO:0009739: response to gibberellin | 3.03E-02 |
| 71 | GO:0008380: RNA splicing | 3.17E-02 |
| 72 | GO:0042742: defense response to bacterium | 3.24E-02 |
| 73 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 4.55E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000979: RNA polymerase II core promoter sequence-specific DNA binding | 0.00E+00 |
| 2 | GO:0009974: zeinoxanthin epsilon hydroxylase activity | 0.00E+00 |
| 3 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 5.18E-05 |
| 4 | GO:0045485: omega-6 fatty acid desaturase activity | 5.18E-05 |
| 5 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 5.18E-05 |
| 6 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 1.27E-04 |
| 7 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 1.27E-04 |
| 8 | GO:0003723: RNA binding | 1.56E-04 |
| 9 | GO:0019843: rRNA binding | 2.30E-04 |
| 10 | GO:0016851: magnesium chelatase activity | 3.17E-04 |
| 11 | GO:0016149: translation release factor activity, codon specific | 3.17E-04 |
| 12 | GO:0043023: ribosomal large subunit binding | 3.17E-04 |
| 13 | GO:0016987: sigma factor activity | 4.24E-04 |
| 14 | GO:0043495: protein anchor | 4.24E-04 |
| 15 | GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity | 4.24E-04 |
| 16 | GO:0016279: protein-lysine N-methyltransferase activity | 4.24E-04 |
| 17 | GO:0001053: plastid sigma factor activity | 4.24E-04 |
| 18 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 6.60E-04 |
| 19 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 7.87E-04 |
| 20 | GO:0051920: peroxiredoxin activity | 7.87E-04 |
| 21 | GO:0019899: enzyme binding | 9.18E-04 |
| 22 | GO:0016209: antioxidant activity | 1.06E-03 |
| 23 | GO:0003747: translation release factor activity | 1.35E-03 |
| 24 | GO:0003690: double-stranded DNA binding | 1.37E-03 |
| 25 | GO:0004519: endonuclease activity | 1.43E-03 |
| 26 | GO:0044183: protein binding involved in protein folding | 1.84E-03 |
| 27 | GO:0009982: pseudouridine synthase activity | 2.19E-03 |
| 28 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 2.38E-03 |
| 29 | GO:0043424: protein histidine kinase binding | 3.16E-03 |
| 30 | GO:0022891: substrate-specific transmembrane transporter activity | 3.80E-03 |
| 31 | GO:0003727: single-stranded RNA binding | 4.03E-03 |
| 32 | GO:0008080: N-acetyltransferase activity | 4.72E-03 |
| 33 | GO:0008237: metallopeptidase activity | 6.49E-03 |
| 34 | GO:0016168: chlorophyll binding | 7.31E-03 |
| 35 | GO:0008236: serine-type peptidase activity | 8.17E-03 |
| 36 | GO:0004222: metalloendopeptidase activity | 9.06E-03 |
| 37 | GO:0003993: acid phosphatase activity | 1.03E-02 |
| 38 | GO:0004364: glutathione transferase activity | 1.16E-02 |
| 39 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.33E-02 |
| 40 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.47E-02 |
| 41 | GO:0051082: unfolded protein binding | 1.89E-02 |
| 42 | GO:0016746: transferase activity, transferring acyl groups | 1.93E-02 |
| 43 | GO:0016740: transferase activity | 1.95E-02 |
| 44 | GO:0008026: ATP-dependent helicase activity | 1.97E-02 |
| 45 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 2.26E-02 |
| 46 | GO:0019825: oxygen binding | 2.28E-02 |
| 47 | GO:0046910: pectinesterase inhibitor activity | 2.66E-02 |
| 48 | GO:0005509: calcium ion binding | 2.99E-02 |
| 49 | GO:0042802: identical protein binding | 3.31E-02 |
| 50 | GO:0005215: transporter activity | 3.58E-02 |
| 51 | GO:0000287: magnesium ion binding | 3.76E-02 |
| 52 | GO:0004601: peroxidase activity | 3.81E-02 |
| 53 | GO:0016788: hydrolase activity, acting on ester bonds | 3.86E-02 |
| 54 | GO:0004497: monooxygenase activity | 4.44E-02 |
| 55 | GO:0003729: mRNA binding | 4.79E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 2.18E-24 |
| 2 | GO:0009570: chloroplast stroma | 1.31E-09 |
| 3 | GO:0009941: chloroplast envelope | 2.64E-09 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 1.32E-08 |
| 5 | GO:0009579: thylakoid | 3.31E-07 |
| 6 | GO:0009543: chloroplast thylakoid lumen | 3.86E-07 |
| 7 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 5.18E-05 |
| 8 | GO:0009344: nitrite reductase complex [NAD(P)H] | 5.18E-05 |
| 9 | GO:0031977: thylakoid lumen | 5.75E-05 |
| 10 | GO:0030095: chloroplast photosystem II | 9.00E-05 |
| 11 | GO:0042651: thylakoid membrane | 1.45E-04 |
| 12 | GO:0009654: photosystem II oxygen evolving complex | 1.45E-04 |
| 13 | GO:0010007: magnesium chelatase complex | 2.17E-04 |
| 14 | GO:0033281: TAT protein transport complex | 2.17E-04 |
| 15 | GO:0019898: extrinsic component of membrane | 3.13E-04 |
| 16 | GO:0009536: plastid | 3.18E-04 |
| 17 | GO:0009534: chloroplast thylakoid | 5.69E-04 |
| 18 | GO:0009533: chloroplast stromal thylakoid | 9.18E-04 |
| 19 | GO:0000311: plastid large ribosomal subunit | 2.01E-03 |
| 20 | GO:0009508: plastid chromosome | 2.19E-03 |
| 21 | GO:0009523: photosystem II | 5.21E-03 |
| 22 | GO:0031969: chloroplast membrane | 6.08E-03 |
| 23 | GO:0009295: nucleoid | 6.49E-03 |
| 24 | GO:0009707: chloroplast outer membrane | 8.46E-03 |
| 25 | GO:0015934: large ribosomal subunit | 9.36E-03 |
| 26 | GO:0043231: intracellular membrane-bounded organelle | 9.89E-03 |
| 27 | GO:0009706: chloroplast inner membrane | 1.89E-02 |
| 28 | GO:0005840: ribosome | 3.39E-02 |
| 29 | GO:0046658: anchored component of plasma membrane | 3.41E-02 |