co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G21150

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0071433: cell wall repair	0.00E+00
2	GO:0006592: ornithine biosynthetic process	0.00E+00
3	GO:0039694: viral RNA genome replication	0.00E+00
4	GO:0002376: immune system process	0.00E+00
5	GO:0030149: sphingolipid catabolic process	0.00E+00
6	GO:0006099: tricarboxylic acid cycle	5.60E-11
7	GO:0006102: isocitrate metabolic process	2.27E-08
8	GO:0046686: response to cadmium ion	2.71E-08
9	GO:0045454: cell redox homeostasis	3.57E-08
10	GO:0034976: response to endoplasmic reticulum stress	8.88E-07
11	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	1.93E-06
12	GO:0006101: citrate metabolic process	1.93E-06
13	GO:0006457: protein folding	2.45E-05
14	GO:0006564: L-serine biosynthetic process	4.82E-05
15	GO:0006097: glyoxylate cycle	4.82E-05
16	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	7.11E-05
17	GO:0019673: GDP-mannose metabolic process	2.02E-04
18	GO:0046244: salicylic acid catabolic process	2.02E-04
19	GO:0006390: transcription from mitochondrial promoter	2.02E-04
20	GO:0080120: CAAX-box protein maturation	2.02E-04
21	GO:0006772: thiamine metabolic process	2.02E-04
22	GO:0035266: meristem growth	2.02E-04
23	GO:0071586: CAAX-box protein processing	2.02E-04
24	GO:0007292: female gamete generation	2.02E-04
25	GO:0051938: L-glutamate import	2.02E-04
26	GO:1990641: response to iron ion starvation	2.02E-04
27	GO:0009700: indole phytoalexin biosynthetic process	2.02E-04
28	GO:0043687: post-translational protein modification	2.02E-04
29	GO:0009651: response to salt stress	2.25E-04
30	GO:0008535: respiratory chain complex IV assembly	4.52E-04
31	GO:0043091: L-arginine import	4.52E-04
32	GO:0051262: protein tetramerization	4.52E-04
33	GO:0051788: response to misfolded protein	4.52E-04
34	GO:0019752: carboxylic acid metabolic process	4.52E-04
35	GO:0006979: response to oxidative stress	4.54E-04
36	GO:0010043: response to zinc ion	5.14E-04
37	GO:0090351: seedling development	6.71E-04
38	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	7.36E-04
39	GO:0051176: positive regulation of sulfur metabolic process	7.36E-04
40	GO:0042256: mature ribosome assembly	7.36E-04
41	GO:0045039: protein import into mitochondrial inner membrane	7.36E-04
42	GO:0060968: regulation of gene silencing	7.36E-04
43	GO:0032940: secretion by cell	7.36E-04
44	GO:0010498: proteasomal protein catabolic process	7.36E-04
45	GO:1902626: assembly of large subunit precursor of preribosome	7.36E-04
46	GO:0000162: tryptophan biosynthetic process	7.47E-04
47	GO:0006511: ubiquitin-dependent protein catabolic process	7.56E-04
48	GO:0042823: pyridoxal phosphate biosynthetic process	1.05E-03
49	GO:0001676: long-chain fatty acid metabolic process	1.05E-03
50	GO:0002239: response to oomycetes	1.05E-03
51	GO:0072334: UDP-galactose transmembrane transport	1.05E-03
52	GO:0033014: tetrapyrrole biosynthetic process	1.05E-03
53	GO:0030433: ubiquitin-dependent ERAD pathway	1.08E-03
54	GO:0006486: protein glycosylation	1.15E-03
55	GO:0051205: protein insertion into membrane	1.40E-03
56	GO:1902584: positive regulation of response to water deprivation	1.40E-03
57	GO:0000460: maturation of 5.8S rRNA	1.40E-03
58	GO:0033356: UDP-L-arabinose metabolic process	1.40E-03
59	GO:0018279: protein N-linked glycosylation via asparagine	1.78E-03
60	GO:0046283: anthocyanin-containing compound metabolic process	1.78E-03
61	GO:0009229: thiamine diphosphate biosynthetic process	1.78E-03
62	GO:0006461: protein complex assembly	1.78E-03
63	GO:0007029: endoplasmic reticulum organization	1.78E-03
64	GO:0045927: positive regulation of growth	1.78E-03
65	GO:0000304: response to singlet oxygen	1.78E-03
66	GO:0009697: salicylic acid biosynthetic process	1.78E-03
67	GO:0002238: response to molecule of fungal origin	2.19E-03
68	GO:0006014: D-ribose metabolic process	2.19E-03
69	GO:0006121: mitochondrial electron transport, succinate to ubiquinone	2.19E-03
70	GO:0048827: phyllome development	2.19E-03
71	GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation	2.19E-03
72	GO:0048232: male gamete generation	2.19E-03
73	GO:0000470: maturation of LSU-rRNA	2.19E-03
74	GO:0043248: proteasome assembly	2.19E-03
75	GO:0047484: regulation of response to osmotic stress	2.19E-03
76	GO:0006120: mitochondrial electron transport, NADH to ubiquinone	2.63E-03
77	GO:0000054: ribosomal subunit export from nucleus	2.63E-03
78	GO:0015977: carbon fixation	2.63E-03
79	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	2.63E-03
80	GO:0034389: lipid particle organization	2.63E-03
81	GO:0050790: regulation of catalytic activity	3.09E-03
82	GO:0080186: developmental vegetative growth	3.09E-03
83	GO:0042773: ATP synthesis coupled electron transport	3.09E-03
84	GO:0010150: leaf senescence	3.58E-03
85	GO:0010078: maintenance of root meristem identity	3.59E-03
86	GO:0006875: cellular metal ion homeostasis	3.59E-03
87	GO:0009819: drought recovery	3.59E-03
88	GO:0030091: protein repair	3.59E-03
89	GO:0009407: toxin catabolic process	4.08E-03
90	GO:0006526: arginine biosynthetic process	4.10E-03
91	GO:0010204: defense response signaling pathway, resistance gene-independent	4.10E-03
92	GO:0030968: endoplasmic reticulum unfolded protein response	4.10E-03
93	GO:0010120: camalexin biosynthetic process	4.10E-03
94	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	4.12E-03
95	GO:0009617: response to bacterium	4.47E-03
96	GO:0006783: heme biosynthetic process	4.65E-03
97	GO:0010112: regulation of systemic acquired resistance	4.65E-03
98	GO:0098656: anion transmembrane transport	4.65E-03
99	GO:0045087: innate immune response	4.69E-03
100	GO:0006508: proteolysis	5.21E-03
101	GO:0010205: photoinhibition	5.21E-03
102	GO:0043067: regulation of programmed cell death	5.21E-03
103	GO:0048829: root cap development	5.80E-03
104	GO:0009807: lignan biosynthetic process	6.41E-03
105	GO:0010015: root morphogenesis	6.41E-03
106	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	7.04E-03
107	GO:0006790: sulfur compound metabolic process	7.04E-03
108	GO:0006820: anion transport	7.04E-03
109	GO:0055046: microgametogenesis	7.70E-03
110	GO:0009933: meristem structural organization	8.37E-03
111	GO:0051603: proteolysis involved in cellular protein catabolic process	8.43E-03
112	GO:0046854: phosphatidylinositol phosphorylation	9.07E-03
113	GO:0010053: root epidermal cell differentiation	9.07E-03
114	GO:0006096: glycolytic process	9.63E-03
115	GO:0007010: cytoskeleton organization	1.05E-02
116	GO:2000377: regulation of reactive oxygen species metabolic process	1.05E-02
117	GO:0003333: amino acid transmembrane transport	1.21E-02
118	GO:0031348: negative regulation of defense response	1.29E-02
119	GO:0019748: secondary metabolic process	1.29E-02
120	GO:0016226: iron-sulfur cluster assembly	1.29E-02
121	GO:0009751: response to salicylic acid	1.32E-02
122	GO:0009625: response to insect	1.37E-02
123	GO:0071215: cellular response to abscisic acid stimulus	1.37E-02
124	GO:0048364: root development	1.42E-02
125	GO:0009561: megagametogenesis	1.45E-02
126	GO:0009306: protein secretion	1.45E-02
127	GO:0042147: retrograde transport, endosome to Golgi	1.54E-02
128	GO:0010501: RNA secondary structure unwinding	1.62E-02
129	GO:0000413: protein peptidyl-prolyl isomerization	1.62E-02
130	GO:0048868: pollen tube development	1.71E-02
131	GO:0006520: cellular amino acid metabolic process	1.71E-02
132	GO:0006952: defense response	1.83E-02
133	GO:0006413: translational initiation	1.88E-02
134	GO:0019252: starch biosynthetic process	1.89E-02
135	GO:0006891: intra-Golgi vesicle-mediated transport	1.99E-02
136	GO:0010193: response to ozone	1.99E-02
137	GO:0080156: mitochondrial mRNA modification	1.99E-02
138	GO:0002229: defense response to oomycetes	1.99E-02
139	GO:0042742: defense response to bacterium	2.05E-02
140	GO:0055114: oxidation-reduction process	2.27E-02
141	GO:0009567: double fertilization forming a zygote and endosperm	2.28E-02
142	GO:0009615: response to virus	2.58E-02
143	GO:0001666: response to hypoxia	2.58E-02
144	GO:0006950: response to stress	2.90E-02
145	GO:0015995: chlorophyll biosynthetic process	2.90E-02
146	GO:0015031: protein transport	2.93E-02
147	GO:0016311: dephosphorylation	3.01E-02
148	GO:0048481: plant ovule development	3.12E-02
149	GO:0030244: cellulose biosynthetic process	3.12E-02
150	GO:0010311: lateral root formation	3.23E-02
151	GO:0048767: root hair elongation	3.23E-02
152	GO:0009832: plant-type cell wall biogenesis	3.23E-02
153	GO:0006499: N-terminal protein myristoylation	3.35E-02
154	GO:0016051: carbohydrate biosynthetic process	3.69E-02
155	GO:0009853: photorespiration	3.69E-02
156	GO:0010200: response to chitin	3.99E-02
157	GO:0006631: fatty acid metabolic process	4.18E-02
158	GO:0042546: cell wall biogenesis	4.55E-02
159	GO:0000209: protein polyubiquitination	4.55E-02
160	GO:0009644: response to high light intensity	4.68E-02
161	GO:0009636: response to toxic substance	4.80E-02
162	GO:0009965: leaf morphogenesis	4.80E-02
163	GO:0006855: drug transmembrane transport	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0008777: acetylornithine deacetylase activity	0.00E+00
2	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	0.00E+00
3	GO:0008117: sphinganine-1-phosphate aldolase activity	0.00E+00
4	GO:0051670: inulinase activity	0.00E+00
5	GO:0050220: prostaglandin-E synthase activity	0.00E+00
6	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
7	GO:0003980: UDP-glucose:glycoprotein glucosyltransferase activity	0.00E+00
8	GO:0016312: inositol bisphosphate phosphatase activity	0.00E+00
9	GO:0004298: threonine-type endopeptidase activity	1.78E-06
10	GO:0003994: aconitate hydratase activity	1.93E-06
11	GO:0003756: protein disulfide isomerase activity	3.24E-06
12	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.63E-05
13	GO:0008233: peptidase activity	4.13E-05
14	GO:0051539: 4 iron, 4 sulfur cluster binding	6.60E-05
15	GO:0036402: proteasome-activating ATPase activity	7.11E-05
16	GO:0005507: copper ion binding	1.92E-04
17	GO:0004788: thiamine diphosphokinase activity	2.02E-04
18	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	2.02E-04
19	GO:0031219: levanase activity	2.02E-04
20	GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity	2.02E-04
21	GO:0004425: indole-3-glycerol-phosphate synthase activity	2.02E-04
22	GO:0004112: cyclic-nucleotide phosphodiesterase activity	2.02E-04
23	GO:0051669: fructan beta-fructosidase activity	2.02E-04
24	GO:0008446: GDP-mannose 4,6-dehydratase activity	2.02E-04
25	GO:0004048: anthranilate phosphoribosyltransferase activity	2.02E-04
26	GO:0004325: ferrochelatase activity	2.02E-04
27	GO:0030955: potassium ion binding	3.01E-04
28	GO:0004743: pyruvate kinase activity	3.01E-04
29	GO:0015036: disulfide oxidoreductase activity	4.52E-04
30	GO:0048531: beta-1,3-galactosyltransferase activity	4.52E-04
31	GO:0004776: succinate-CoA ligase (GDP-forming) activity	4.52E-04
32	GO:0004617: phosphoglycerate dehydrogenase activity	4.52E-04
33	GO:0018708: thiol S-methyltransferase activity	4.52E-04
34	GO:0004775: succinate-CoA ligase (ADP-forming) activity	4.52E-04
35	GO:0019172: glyoxalase III activity	4.52E-04
36	GO:0017025: TBP-class protein binding	6.71E-04
37	GO:0004557: alpha-galactosidase activity	7.36E-04
38	GO:0008964: phosphoenolpyruvate carboxylase activity	7.36E-04
39	GO:0052692: raffinose alpha-galactosidase activity	7.36E-04
40	GO:0000030: mannosyltransferase activity	7.36E-04
41	GO:0008430: selenium binding	7.36E-04
42	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	7.36E-04
43	GO:0004148: dihydrolipoyl dehydrogenase activity	7.36E-04
44	GO:0043023: ribosomal large subunit binding	1.05E-03
45	GO:0015189: L-lysine transmembrane transporter activity	1.05E-03
46	GO:0015181: arginine transmembrane transporter activity	1.05E-03
47	GO:0004576: oligosaccharyl transferase activity	1.40E-03
48	GO:0005313: L-glutamate transmembrane transporter activity	1.40E-03
49	GO:0005509: calcium ion binding	1.41E-03
50	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	1.78E-03
51	GO:0000104: succinate dehydrogenase activity	1.78E-03
52	GO:0005496: steroid binding	1.78E-03
53	GO:0015301: anion:anion antiporter activity	1.78E-03
54	GO:0005459: UDP-galactose transmembrane transporter activity	1.78E-03
55	GO:0005452: inorganic anion exchanger activity	1.78E-03
56	GO:0051082: unfolded protein binding	1.79E-03
57	GO:0008137: NADH dehydrogenase (ubiquinone) activity	1.98E-03
58	GO:0004602: glutathione peroxidase activity	2.63E-03
59	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	2.63E-03
60	GO:0051920: peroxiredoxin activity	2.63E-03
61	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	2.63E-03
62	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	2.63E-03
63	GO:0102391: decanoate--CoA ligase activity	2.63E-03
64	GO:0004747: ribokinase activity	2.63E-03
65	GO:0008320: protein transmembrane transporter activity	3.09E-03
66	GO:0043295: glutathione binding	3.09E-03
67	GO:0004467: long-chain fatty acid-CoA ligase activity	3.09E-03
68	GO:0016831: carboxy-lyase activity	3.09E-03
69	GO:0043022: ribosome binding	3.59E-03
70	GO:0008865: fructokinase activity	3.59E-03
71	GO:0015288: porin activity	3.59E-03
72	GO:0016209: antioxidant activity	3.59E-03
73	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.71E-03
74	GO:0008308: voltage-gated anion channel activity	4.10E-03
75	GO:0071949: FAD binding	4.65E-03
76	GO:0015174: basic amino acid transmembrane transporter activity	5.21E-03
77	GO:0008171: O-methyltransferase activity	5.80E-03
78	GO:0008047: enzyme activator activity	5.80E-03
79	GO:0004364: glutathione transferase activity	5.80E-03
80	GO:0000287: magnesium ion binding	6.08E-03
81	GO:0004129: cytochrome-c oxidase activity	6.41E-03
82	GO:0051287: NAD binding	7.31E-03
83	GO:0004022: alcohol dehydrogenase (NAD) activity	7.70E-03
84	GO:0004175: endopeptidase activity	8.37E-03
85	GO:0004190: aspartic-type endopeptidase activity	9.07E-03
86	GO:0051536: iron-sulfur cluster binding	1.05E-02
87	GO:0003954: NADH dehydrogenase activity	1.05E-02
88	GO:0016746: transferase activity, transferring acyl groups	1.20E-02
89	GO:0005524: ATP binding	1.26E-02
90	GO:0005525: GTP binding	1.51E-02
91	GO:0010181: FMN binding	1.80E-02
92	GO:0016853: isomerase activity	1.80E-02
93	GO:0050662: coenzyme binding	1.80E-02
94	GO:0048038: quinone binding	1.99E-02
95	GO:0004197: cysteine-type endopeptidase activity	2.08E-02
96	GO:0003743: translation initiation factor activity	2.35E-02
97	GO:0008237: metallopeptidase activity	2.38E-02
98	GO:0005200: structural constituent of cytoskeleton	2.38E-02
99	GO:0016597: amino acid binding	2.48E-02
100	GO:0051213: dioxygenase activity	2.58E-02
101	GO:0030247: polysaccharide binding	2.90E-02
102	GO:0004004: ATP-dependent RNA helicase activity	2.90E-02
103	GO:0015238: drug transmembrane transporter activity	3.23E-02
104	GO:0004222: metalloendopeptidase activity	3.35E-02
105	GO:0050897: cobalt ion binding	3.46E-02
106	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.69E-02
107	GO:0003746: translation elongation factor activity	3.69E-02
108	GO:0003697: single-stranded DNA binding	3.69E-02
109	GO:0004497: monooxygenase activity	3.86E-02
110	GO:0061630: ubiquitin protein ligase activity	4.06E-02
111	GO:0051537: 2 iron, 2 sulfur cluster binding	4.68E-02
112	GO:0043621: protein self-association	4.68E-02
113	GO:0016757: transferase activity, transferring glycosyl groups	4.76E-02
114	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0000327: lytic vacuole within protein storage vacuole	0.00E+00
2	GO:0019034: viral replication complex	0.00E+00
3	GO:0045252: oxoglutarate dehydrogenase complex	0.00E+00
4	GO:0005783: endoplasmic reticulum	5.34E-12
5	GO:0005829: cytosol	9.14E-09
6	GO:0000502: proteasome complex	4.71E-07
7	GO:0005788: endoplasmic reticulum lumen	7.46E-07
8	GO:0005839: proteasome core complex	1.78E-06
9	GO:0019773: proteasome core complex, alpha-subunit complex	4.29E-06
10	GO:0009507: chloroplast	3.81E-05
11	GO:0031597: cytosolic proteasome complex	9.88E-05
12	GO:0031595: nuclear proteasome complex	1.31E-04
13	GO:0034245: mitochondrial DNA-directed RNA polymerase complex	2.02E-04
14	GO:0005774: vacuolar membrane	2.48E-04
15	GO:0005739: mitochondrion	2.80E-04
16	GO:0005773: vacuole	2.93E-04
17	GO:0008540: proteasome regulatory particle, base subcomplex	3.01E-04
18	GO:0031314: extrinsic component of mitochondrial inner membrane	4.52E-04
19	GO:0030134: ER to Golgi transport vesicle	4.52E-04
20	GO:0016020: membrane	5.19E-04
21	GO:0030176: integral component of endoplasmic reticulum membrane	6.71E-04
22	GO:0046861: glyoxysomal membrane	7.36E-04
23	GO:0005789: endoplasmic reticulum membrane	1.14E-03
24	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	1.40E-03
25	GO:0030660: Golgi-associated vesicle membrane	1.40E-03
26	GO:0005747: mitochondrial respiratory chain complex I	1.47E-03
27	GO:0009570: chloroplast stroma	1.54E-03
28	GO:0005886: plasma membrane	1.77E-03
29	GO:0008250: oligosaccharyltransferase complex	1.78E-03
30	GO:0005746: mitochondrial respiratory chain	1.78E-03
31	GO:0032588: trans-Golgi network membrane	2.19E-03
32	GO:0009536: plastid	2.48E-03
33	GO:0005762: mitochondrial large ribosomal subunit	2.63E-03
34	GO:0005801: cis-Golgi network	2.63E-03
35	GO:0030173: integral component of Golgi membrane	2.63E-03
36	GO:0048046: apoplast	2.63E-03
37	GO:0030687: preribosome, large subunit precursor	3.09E-03
38	GO:0005759: mitochondrial matrix	3.17E-03
39	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	3.59E-03
40	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	3.59E-03
41	GO:0005811: lipid particle	4.10E-03
42	GO:0000326: protein storage vacuole	4.10E-03
43	GO:0046930: pore complex	4.10E-03
44	GO:0009514: glyoxysome	4.10E-03
45	GO:0031901: early endosome membrane	4.65E-03
46	GO:0005765: lysosomal membrane	6.41E-03
47	GO:0005852: eukaryotic translation initiation factor 3 complex	6.41E-03
48	GO:0031969: chloroplast membrane	8.18E-03
49	GO:0005764: lysosome	8.37E-03
50	GO:0043234: protein complex	9.79E-03
51	GO:0009506: plasmodesma	1.03E-02
52	GO:0005794: Golgi apparatus	1.05E-02
53	GO:0045271: respiratory chain complex I	1.13E-02
54	GO:0005741: mitochondrial outer membrane	1.21E-02
55	GO:0005743: mitochondrial inner membrane	1.23E-02
56	GO:0005623: cell	1.50E-02
57	GO:0005618: cell wall	2.41E-02
58	GO:0022626: cytosolic ribosome	2.62E-02
59	GO:0009505: plant-type cell wall	2.87E-02
60	GO:0009941: chloroplast envelope	3.31E-02
61	GO:0005819: spindle	3.93E-02
62	GO:0005856: cytoskeleton	4.80E-02