co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G19670

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0016236: macroautophagy	0.00E+00
2	GO:0010606: positive regulation of cytoplasmic mRNA processing body assembly	0.00E+00
3	GO:1900103: positive regulation of endoplasmic reticulum unfolded protein response	0.00E+00
4	GO:0048024: regulation of mRNA splicing, via spliceosome	0.00E+00
5	GO:0036258: multivesicular body assembly	0.00E+00
6	GO:0046467: membrane lipid biosynthetic process	5.64E-05
7	GO:0006376: mRNA splice site selection	5.64E-05
8	GO:0031338: regulation of vesicle fusion	5.64E-05
9	GO:0071806: protein transmembrane transport	5.64E-05
10	GO:0010201: response to continuous far red light stimulus by the high-irradiance response system	5.64E-05
11	GO:0030242: pexophagy	5.64E-05
12	GO:0000303: response to superoxide	5.64E-05
13	GO:0071395: cellular response to jasmonic acid stimulus	1.37E-04
14	GO:0051258: protein polymerization	1.37E-04
15	GO:0090630: activation of GTPase activity	2.34E-04
16	GO:0080119: ER body organization	3.41E-04
17	GO:0070676: intralumenal vesicle formation	3.41E-04
18	GO:0001676: long-chain fatty acid metabolic process	3.41E-04
19	GO:1901000: regulation of response to salt stress	3.41E-04
20	GO:0006809: nitric oxide biosynthetic process	3.41E-04
21	GO:0006914: autophagy	4.52E-04
22	GO:0045324: late endosome to vacuole transport	4.56E-04
23	GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA	4.56E-04
24	GO:0007029: endoplasmic reticulum organization	5.78E-04
25	GO:0032876: negative regulation of DNA endoreduplication	5.78E-04
26	GO:0006751: glutathione catabolic process	7.07E-04
27	GO:0048232: male gamete generation	7.07E-04
28	GO:0070814: hydrogen sulfide biosynthetic process	7.07E-04
29	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	7.07E-04
30	GO:0033962: cytoplasmic mRNA processing body assembly	8.44E-04
31	GO:0017148: negative regulation of translation	8.44E-04
32	GO:0000911: cytokinesis by cell plate formation	8.44E-04
33	GO:0015937: coenzyme A biosynthetic process	9.85E-04
34	GO:0009610: response to symbiotic fungus	9.85E-04
35	GO:0071446: cellular response to salicylic acid stimulus	9.85E-04
36	GO:0006886: intracellular protein transport	1.19E-03
37	GO:0009821: alkaloid biosynthetic process	1.45E-03
38	GO:0009638: phototropism	1.62E-03
39	GO:0000103: sulfate assimilation	1.79E-03
40	GO:0015031: protein transport	2.09E-03
41	GO:0008361: regulation of cell size	2.16E-03
42	GO:0012501: programmed cell death	2.16E-03
43	GO:0006626: protein targeting to mitochondrion	2.36E-03
44	GO:0055046: microgametogenesis	2.36E-03
45	GO:0010102: lateral root morphogenesis	2.36E-03
46	GO:0009785: blue light signaling pathway	2.36E-03
47	GO:0046854: phosphatidylinositol phosphorylation	2.76E-03
48	GO:0010053: root epidermal cell differentiation	2.76E-03
49	GO:0007030: Golgi organization	2.76E-03
50	GO:0009825: multidimensional cell growth	2.76E-03
51	GO:0006468: protein phosphorylation	2.87E-03
52	GO:0009790: embryo development	3.01E-03
53	GO:2000377: regulation of reactive oxygen species metabolic process	3.18E-03
54	GO:0030150: protein import into mitochondrial matrix	3.18E-03
55	GO:0040008: regulation of growth	3.39E-03
56	GO:0031408: oxylipin biosynthetic process	3.63E-03
57	GO:0003333: amino acid transmembrane transport	3.63E-03
58	GO:0009814: defense response, incompatible interaction	3.86E-03
59	GO:0030433: ubiquitin-dependent ERAD pathway	3.86E-03
60	GO:0031348: negative regulation of defense response	3.86E-03
61	GO:0009561: megagametogenesis	4.34E-03
62	GO:0070417: cellular response to cold	4.58E-03
63	GO:0042147: retrograde transport, endosome to Golgi	4.58E-03
64	GO:0010197: polar nucleus fusion	5.09E-03
65	GO:0055072: iron ion homeostasis	5.61E-03
66	GO:0006623: protein targeting to vacuole	5.61E-03
67	GO:0006891: intra-Golgi vesicle-mediated transport	5.88E-03
68	GO:0010193: response to ozone	5.88E-03
69	GO:0016032: viral process	6.15E-03
70	GO:0009630: gravitropism	6.15E-03
71	GO:0009723: response to ethylene	6.32E-03
72	GO:0048366: leaf development	6.43E-03
73	GO:0006464: cellular protein modification process	6.71E-03
74	GO:0010200: response to chitin	7.01E-03
75	GO:0051607: defense response to virus	7.29E-03
76	GO:0016579: protein deubiquitination	7.29E-03
77	GO:0006979: response to oxidative stress	7.53E-03
78	GO:0009816: defense response to bacterium, incompatible interaction	7.89E-03
79	GO:0006950: response to stress	8.50E-03
80	GO:0006888: ER to Golgi vesicle-mediated transport	8.50E-03
81	GO:0016049: cell growth	8.81E-03
82	GO:0010311: lateral root formation	9.45E-03
83	GO:0048527: lateral root development	1.01E-02
84	GO:0009867: jasmonic acid mediated signaling pathway	1.08E-02
85	GO:0034599: cellular response to oxidative stress	1.11E-02
86	GO:0006631: fatty acid metabolic process	1.22E-02
87	GO:0008283: cell proliferation	1.29E-02
88	GO:0051707: response to other organism	1.29E-02
89	GO:0000209: protein polyubiquitination	1.33E-02
90	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	1.48E-02
91	GO:0009846: pollen germination	1.51E-02
92	GO:0042538: hyperosmotic salinity response	1.51E-02
93	GO:0009908: flower development	1.61E-02
94	GO:0051603: proteolysis involved in cellular protein catabolic process	1.63E-02
95	GO:0048367: shoot system development	1.83E-02
96	GO:0051726: regulation of cell cycle	2.13E-02
97	GO:0009742: brassinosteroid mediated signaling pathway	2.13E-02
98	GO:0010150: leaf senescence	3.02E-02
99	GO:0016567: protein ubiquitination	3.04E-02
100	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.27E-02
101	GO:0007166: cell surface receptor signaling pathway	3.32E-02
102	GO:0009617: response to bacterium	3.42E-02
103	GO:0006970: response to osmotic stress	4.34E-02

Rank	GO Term	Adjusted P value
1	GO:0017168: 5-oxoprolinase (ATP-hydrolyzing) activity	0.00E+00
2	GO:0033550: MAP kinase tyrosine phosphatase activity	0.00E+00
3	GO:0004594: pantothenate kinase activity	1.37E-04
4	GO:0043130: ubiquitin binding	1.46E-04
5	GO:0004781: sulfate adenylyltransferase (ATP) activity	2.34E-04
6	GO:0000285: 1-phosphatidylinositol-3-phosphate 5-kinase activity	3.41E-04
7	GO:0004416: hydroxyacylglutathione hydrolase activity	3.41E-04
8	GO:0051213: dioxygenase activity	5.36E-04
9	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	5.78E-04
10	GO:0017137: Rab GTPase binding	5.78E-04
11	GO:0005096: GTPase activator activity	7.26E-04
12	GO:0005515: protein binding	8.23E-04
13	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	8.44E-04
14	GO:0003950: NAD+ ADP-ribosyltransferase activity	8.44E-04
15	GO:0004712: protein serine/threonine/tyrosine kinase activity	9.43E-04
16	GO:0004869: cysteine-type endopeptidase inhibitor activity	1.13E-03
17	GO:0016301: kinase activity	1.42E-03
18	GO:0015174: basic amino acid transmembrane transporter activity	1.62E-03
19	GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity	1.79E-03
20	GO:0005524: ATP binding	1.95E-03
21	GO:0015266: protein channel activity	2.36E-03
22	GO:0004725: protein tyrosine phosphatase activity	2.97E-03
23	GO:0019706: protein-cysteine S-palmitoyltransferase activity	3.63E-03
24	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	3.63E-03
25	GO:0004674: protein serine/threonine kinase activity	4.47E-03
26	GO:0004843: thiol-dependent ubiquitin-specific protease activity	5.88E-03
27	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	7.00E-03
28	GO:0042803: protein homodimerization activity	8.50E-03
29	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	9.13E-03
30	GO:0008270: zinc ion binding	1.06E-02
31	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.08E-02
32	GO:0004672: protein kinase activity	1.22E-02
33	GO:0003729: mRNA binding	1.24E-02
34	GO:0043621: protein self-association	1.36E-02
35	GO:0035091: phosphatidylinositol binding	1.36E-02
36	GO:0015171: amino acid transmembrane transporter activity	1.71E-02
37	GO:0005516: calmodulin binding	2.68E-02
38	GO:0008565: protein transporter activity	2.73E-02
39	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.87E-02
40	GO:0046982: protein heterodimerization activity	4.06E-02
41	GO:0004601: peroxidase activity	4.12E-02
42	GO:0061630: ubiquitin protein ligase activity	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0071561: nucleus-vacuole junction	0.00E+00
2	GO:0034271: phosphatidylinositol 3-kinase complex, class III, type I	5.64E-05
3	GO:0034272: phosphatidylinositol 3-kinase complex, class III, type II	5.64E-05
4	GO:0035061: interchromatin granule	1.37E-04
5	GO:0000813: ESCRT I complex	5.78E-04
6	GO:0030127: COPII vesicle coat	7.07E-04
7	GO:0016363: nuclear matrix	8.44E-04
8	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	9.85E-04
9	GO:0031305: integral component of mitochondrial inner membrane	1.13E-03
10	GO:0005886: plasma membrane	1.96E-03
11	GO:0005795: Golgi stack	2.76E-03
12	GO:0005744: mitochondrial inner membrane presequence translocase complex	4.34E-03
13	GO:0030136: clathrin-coated vesicle	4.58E-03
14	GO:0005770: late endosome	5.09E-03
15	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	5.99E-03
16	GO:0005622: intracellular	6.32E-03
17	GO:0000932: P-body	7.59E-03
18	GO:0005643: nuclear pore	9.13E-03
19	GO:0031902: late endosome membrane	1.22E-02
20	GO:0005789: endoplasmic reticulum membrane	1.28E-02
21	GO:0005681: spliceosomal complex	1.79E-02
22	GO:0016607: nuclear speck	1.83E-02
23	GO:0010008: endosome membrane	1.83E-02
24	GO:0005834: heterotrimeric G-protein complex	1.88E-02
25	GO:0012505: endomembrane system	2.00E-02
26	GO:0009705: plant-type vacuole membrane	3.02E-02
27	GO:0046658: anchored component of plasma membrane	3.69E-02