co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G18800

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0045047: protein targeting to ER	0.00E+00
2	GO:0039694: viral RNA genome replication	0.00E+00
3	GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	0.00E+00
4	GO:0006721: terpenoid metabolic process	0.00E+00
5	GO:0002376: immune system process	0.00E+00
6	GO:0019307: mannose biosynthetic process	0.00E+00
7	GO:0046686: response to cadmium ion	1.59E-09
8	GO:0045454: cell redox homeostasis	1.59E-08
9	GO:0006457: protein folding	6.44E-08
10	GO:0034976: response to endoplasmic reticulum stress	1.19E-07
11	GO:0030968: endoplasmic reticulum unfolded protein response	8.93E-07
12	GO:0009651: response to salt stress	9.73E-07
13	GO:0006099: tricarboxylic acid cycle	9.50E-06
14	GO:0006511: ubiquitin-dependent protein catabolic process	1.30E-05
15	GO:0018279: protein N-linked glycosylation via asparagine	1.65E-05
16	GO:0006605: protein targeting	6.23E-05
17	GO:0006102: isocitrate metabolic process	6.23E-05
18	GO:0006047: UDP-N-acetylglucosamine metabolic process	1.06E-04
19	GO:0016487: farnesol metabolic process	1.06E-04
20	GO:0043687: post-translational protein modification	1.06E-04
21	GO:0019673: GDP-mannose metabolic process	1.06E-04
22	GO:0051775: response to redox state	1.06E-04
23	GO:0042964: thioredoxin reduction	1.06E-04
24	GO:0019276: UDP-N-acetylgalactosamine metabolic process	1.06E-04
25	GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine	1.06E-04
26	GO:0010372: positive regulation of gibberellin biosynthetic process	2.48E-04
27	GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	2.48E-04
28	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	2.48E-04
29	GO:0006487: protein N-linked glycosylation	3.49E-04
30	GO:0051603: proteolysis involved in cellular protein catabolic process	3.93E-04
31	GO:0032940: secretion by cell	4.12E-04
32	GO:0006013: mannose metabolic process	4.12E-04
33	GO:0055074: calcium ion homeostasis	4.12E-04
34	GO:0006048: UDP-N-acetylglucosamine biosynthetic process	4.12E-04
35	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	4.12E-04
36	GO:0006011: UDP-glucose metabolic process	4.12E-04
37	GO:0048316: seed development	4.86E-04
38	GO:0009306: protein secretion	5.47E-04
39	GO:0009553: embryo sac development	5.68E-04
40	GO:0072334: UDP-galactose transmembrane transport	5.92E-04
41	GO:0033014: tetrapyrrole biosynthetic process	5.92E-04
42	GO:0010116: positive regulation of abscisic acid biosynthetic process	5.92E-04
43	GO:0009298: GDP-mannose biosynthetic process	5.92E-04
44	GO:0000460: maturation of 5.8S rRNA	7.86E-04
45	GO:0045116: protein neddylation	9.92E-04
46	GO:0000304: response to singlet oxygen	9.92E-04
47	GO:0009697: salicylic acid biosynthetic process	9.92E-04
48	GO:0000470: maturation of LSU-rRNA	1.21E-03
49	GO:0047484: regulation of response to osmotic stress	1.21E-03
50	GO:0006979: response to oxidative stress	1.24E-03
51	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.45E-03
52	GO:1902074: response to salt	1.70E-03
53	GO:0010043: response to zinc ion	1.78E-03
54	GO:0009555: pollen development	1.81E-03
55	GO:0015031: protein transport	1.87E-03
56	GO:0006402: mRNA catabolic process	1.97E-03
57	GO:0030091: protein repair	1.97E-03
58	GO:0019430: removal of superoxide radicals	2.24E-03
59	GO:0098656: anion transmembrane transport	2.53E-03
60	GO:0046685: response to arsenic-containing substance	2.53E-03
61	GO:0006783: heme biosynthetic process	2.53E-03
62	GO:0015780: nucleotide-sugar transport	2.53E-03
63	GO:0010205: photoinhibition	2.84E-03
64	GO:0043067: regulation of programmed cell death	2.84E-03
65	GO:0009846: pollen germination	3.12E-03
66	GO:0006886: intracellular protein transport	3.43E-03
67	GO:0009807: lignan biosynthetic process	3.47E-03
68	GO:0006820: anion transport	3.81E-03
69	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	3.81E-03
70	GO:0006094: gluconeogenesis	4.16E-03
71	GO:0034605: cellular response to heat	4.52E-03
72	GO:0019853: L-ascorbic acid biosynthetic process	4.88E-03
73	GO:0007131: reciprocal meiotic recombination	6.87E-03
74	GO:0030433: ubiquitin-dependent ERAD pathway	6.87E-03
75	GO:0031348: negative regulation of defense response	6.87E-03
76	GO:0009735: response to cytokinin	7.96E-03
77	GO:0042147: retrograde transport, endosome to Golgi	8.19E-03
78	GO:0010501: RNA secondary structure unwinding	8.64E-03
79	GO:0000413: protein peptidyl-prolyl isomerization	8.64E-03
80	GO:0010154: fruit development	9.10E-03
81	GO:0010197: polar nucleus fusion	9.10E-03
82	GO:0006891: intra-Golgi vesicle-mediated transport	1.06E-02
83	GO:0031047: gene silencing by RNA	1.11E-02
84	GO:0030163: protein catabolic process	1.16E-02
85	GO:0010252: auxin homeostasis	1.21E-02
86	GO:0009826: unidimensional cell growth	1.22E-02
87	GO:0001666: response to hypoxia	1.37E-02
88	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.42E-02
89	GO:0006906: vesicle fusion	1.48E-02
90	GO:0015995: chlorophyll biosynthetic process	1.54E-02
91	GO:0016049: cell growth	1.59E-02
92	GO:0016192: vesicle-mediated transport	1.66E-02
93	GO:0006499: N-terminal protein myristoylation	1.77E-02
94	GO:0045087: innate immune response	1.95E-02
95	GO:0006887: exocytosis	2.21E-02
96	GO:0032259: methylation	2.23E-02
97	GO:0042542: response to hydrogen peroxide	2.27E-02
98	GO:0009408: response to heat	2.33E-02
99	GO:0009744: response to sucrose	2.34E-02
100	GO:0009644: response to high light intensity	2.47E-02
101	GO:0009965: leaf morphogenesis	2.54E-02
102	GO:0006855: drug transmembrane transport	2.61E-02
103	GO:0009664: plant-type cell wall organization	2.75E-02
104	GO:0009809: lignin biosynthetic process	2.89E-02
105	GO:0006096: glycolytic process	3.26E-02
106	GO:0009624: response to nematode	3.72E-02
107	GO:0009790: embryo development	4.87E-02

Rank	GO Term	Adjusted P value
1	GO:0004164: diphthine synthase activity	0.00E+00
2	GO:0050220: prostaglandin-E synthase activity	0.00E+00
3	GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity	0.00E+00
4	GO:0047886: farnesol dehydrogenase activity	0.00E+00
5	GO:0004615: phosphomannomutase activity	0.00E+00
6	GO:0004298: threonine-type endopeptidase activity	1.40E-13
7	GO:0008233: peptidase activity	7.17E-09
8	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	6.80E-08
9	GO:0003756: protein disulfide isomerase activity	4.51E-07
10	GO:0004449: isocitrate dehydrogenase (NAD+) activity	5.26E-06
11	GO:0005460: UDP-glucose transmembrane transporter activity	5.26E-06
12	GO:0005459: UDP-galactose transmembrane transporter activity	1.65E-05
13	GO:0008446: GDP-mannose 4,6-dehydratase activity	1.06E-04
14	GO:0004325: ferrochelatase activity	1.06E-04
15	GO:0003977: UDP-N-acetylglucosamine diphosphorylase activity	1.06E-04
16	GO:0048037: cofactor binding	1.06E-04
17	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	1.06E-04
18	GO:0052630: UDP-N-acetylgalactosamine diphosphorylase activity	1.06E-04
19	GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity	1.06E-04
20	GO:0004129: cytochrome-c oxidase activity	1.65E-04
21	GO:0004775: succinate-CoA ligase (ADP-forming) activity	2.48E-04
22	GO:0004776: succinate-CoA ligase (GDP-forming) activity	2.48E-04
23	GO:0019781: NEDD8 activating enzyme activity	2.48E-04
24	GO:0043021: ribonucleoprotein complex binding	2.48E-04
25	GO:0000166: nucleotide binding	3.53E-04
26	GO:0004148: dihydrolipoyl dehydrogenase activity	4.12E-04
27	GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity	4.12E-04
28	GO:0051082: unfolded protein binding	5.89E-04
29	GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	5.92E-04
30	GO:0004576: oligosaccharyl transferase activity	7.86E-04
31	GO:0016004: phospholipase activator activity	7.86E-04
32	GO:0008641: small protein activating enzyme activity	9.92E-04
33	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	1.45E-03
34	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	1.45E-03
35	GO:0008121: ubiquinol-cytochrome-c reductase activity	1.70E-03
36	GO:0008320: protein transmembrane transporter activity	1.70E-03
37	GO:0015288: porin activity	1.97E-03
38	GO:0008308: voltage-gated anion channel activity	2.24E-03
39	GO:0051287: NAD binding	3.01E-03
40	GO:0008171: O-methyltransferase activity	3.15E-03
41	GO:0004190: aspartic-type endopeptidase activity	4.88E-03
42	GO:0051536: iron-sulfur cluster binding	5.65E-03
43	GO:0004540: ribonuclease activity	6.46E-03
44	GO:0016779: nucleotidyltransferase activity	6.87E-03
45	GO:0050662: coenzyme binding	9.58E-03
46	GO:0004791: thioredoxin-disulfide reductase activity	9.58E-03
47	GO:0004518: nuclease activity	1.11E-02
48	GO:0005507: copper ion binding	1.40E-02
49	GO:0030247: polysaccharide binding	1.54E-02
50	GO:0004004: ATP-dependent RNA helicase activity	1.54E-02
51	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.65E-02
52	GO:0005525: GTP binding	1.68E-02
53	GO:0015238: drug transmembrane transporter activity	1.71E-02
54	GO:0050897: cobalt ion binding	1.83E-02
55	GO:0005509: calcium ion binding	1.97E-02
56	GO:0000149: SNARE binding	2.08E-02
57	GO:0050661: NADP binding	2.14E-02
58	GO:0005484: SNAP receptor activity	2.34E-02
59	GO:0051537: 2 iron, 2 sulfur cluster binding	2.47E-02
60	GO:0009055: electron carrier activity	2.50E-02
61	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.61E-02
62	GO:0004650: polygalacturonase activity	3.49E-02
63	GO:0015035: protein disulfide oxidoreductase activity	3.80E-02
64	GO:0016746: transferase activity, transferring acyl groups	3.80E-02
65	GO:0008026: ATP-dependent helicase activity	3.88E-02
66	GO:0004386: helicase activity	3.96E-02
67	GO:0016829: lyase activity	4.61E-02
68	GO:0008565: protein transporter activity	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0019034: viral replication complex	0.00E+00
2	GO:0000327: lytic vacuole within protein storage vacuole	0.00E+00
3	GO:0005783: endoplasmic reticulum	5.99E-15
4	GO:0005839: proteasome core complex	1.40E-13
5	GO:0005788: endoplasmic reticulum lumen	1.50E-13
6	GO:0000502: proteasome complex	1.20E-11
7	GO:0019773: proteasome core complex, alpha-subunit complex	4.97E-09
8	GO:0005774: vacuolar membrane	1.27E-08
9	GO:0008250: oligosaccharyltransferase complex	6.80E-08
10	GO:0005829: cytosol	7.52E-07
11	GO:0005773: vacuole	8.16E-06
12	GO:0005789: endoplasmic reticulum membrane	2.15E-05
13	GO:0045252: oxoglutarate dehydrogenase complex	1.06E-04
14	GO:0016442: RISC complex	1.06E-04
15	GO:0005740: mitochondrial envelope	1.41E-04
16	GO:0070545: PeBoW complex	2.48E-04
17	GO:0030134: ER to Golgi transport vesicle	2.48E-04
18	GO:0030176: integral component of endoplasmic reticulum membrane	2.81E-04
19	GO:0005794: Golgi apparatus	7.20E-04
20	GO:0030660: Golgi-associated vesicle membrane	7.86E-04
21	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	7.86E-04
22	GO:0005623: cell	8.06E-04
23	GO:0005746: mitochondrial respiratory chain	9.92E-04
24	GO:0005762: mitochondrial large ribosomal subunit	1.45E-03
25	GO:0030173: integral component of Golgi membrane	1.45E-03
26	GO:0016020: membrane	1.47E-03
27	GO:0022626: cytosolic ribosome	1.69E-03
28	GO:0030687: preribosome, large subunit precursor	1.70E-03
29	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	1.97E-03
30	GO:0000326: protein storage vacuole	2.24E-03
31	GO:0046930: pore complex	2.24E-03
32	GO:0010494: cytoplasmic stress granule	2.53E-03
33	GO:0005739: mitochondrion	2.70E-03
34	GO:0005886: plasma membrane	2.83E-03
35	GO:0005765: lysosomal membrane	3.47E-03
36	GO:0005852: eukaryotic translation initiation factor 3 complex	3.47E-03
37	GO:0048471: perinuclear region of cytoplasm	3.47E-03
38	GO:0048046: apoplast	3.55E-03
39	GO:0009507: chloroplast	3.71E-03
40	GO:0005834: heterotrimeric G-protein complex	4.21E-03
41	GO:0005750: mitochondrial respiratory chain complex III	4.52E-03
42	GO:0043234: protein complex	5.26E-03
43	GO:0005741: mitochondrial outer membrane	6.46E-03
44	GO:0005759: mitochondrial matrix	7.46E-03
45	GO:0016592: mediator complex	1.11E-02
46	GO:0032580: Golgi cisterna membrane	1.21E-02
47	GO:0000932: P-body	1.37E-02
48	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	1.39E-02
49	GO:0031969: chloroplast membrane	1.58E-02
50	GO:0009506: plasmodesma	1.68E-02
51	GO:0015934: large ribosomal subunit	1.83E-02
52	GO:0031201: SNARE complex	2.21E-02
53	GO:0009536: plastid	2.81E-02
54	GO:0009505: plant-type cell wall	2.89E-02
55	GO:0005635: nuclear envelope	3.04E-02
56	GO:0005747: mitochondrial respiratory chain complex I	3.33E-02
57	GO:0005618: cell wall	4.13E-02
58	GO:0005654: nucleoplasm	4.28E-02