GO Enrichment Analysis of Co-expressed Genes with
AT4G17540
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0097164: ammonium ion metabolic process | 0.00E+00 |
| 2 | GO:0006223: uracil salvage | 0.00E+00 |
| 3 | GO:0006437: tyrosyl-tRNA aminoacylation | 0.00E+00 |
| 4 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 5 | GO:0032544: plastid translation | 3.22E-05 |
| 6 | GO:0042371: vitamin K biosynthetic process | 5.94E-05 |
| 7 | GO:0043686: co-translational protein modification | 5.94E-05 |
| 8 | GO:0019354: siroheme biosynthetic process | 5.94E-05 |
| 9 | GO:0070981: L-asparagine biosynthetic process | 1.44E-04 |
| 10 | GO:0006529: asparagine biosynthetic process | 1.44E-04 |
| 11 | GO:0008616: queuosine biosynthetic process | 1.44E-04 |
| 12 | GO:0006568: tryptophan metabolic process | 1.44E-04 |
| 13 | GO:2000123: positive regulation of stomatal complex development | 1.44E-04 |
| 14 | GO:0043039: tRNA aminoacylation | 1.44E-04 |
| 15 | GO:0051604: protein maturation | 2.46E-04 |
| 16 | GO:0006760: folic acid-containing compound metabolic process | 2.46E-04 |
| 17 | GO:0006633: fatty acid biosynthetic process | 3.93E-04 |
| 18 | GO:0032502: developmental process | 4.26E-04 |
| 19 | GO:0030007: cellular potassium ion homeostasis | 4.78E-04 |
| 20 | GO:0044206: UMP salvage | 4.78E-04 |
| 21 | GO:2000038: regulation of stomatal complex development | 4.78E-04 |
| 22 | GO:0046656: folic acid biosynthetic process | 4.78E-04 |
| 23 | GO:0006021: inositol biosynthetic process | 4.78E-04 |
| 24 | GO:0015976: carbon utilization | 4.78E-04 |
| 25 | GO:0010027: thylakoid membrane organization | 5.73E-04 |
| 26 | GO:0043097: pyrimidine nucleoside salvage | 6.05E-04 |
| 27 | GO:0010236: plastoquinone biosynthetic process | 6.05E-04 |
| 28 | GO:0031365: N-terminal protein amino acid modification | 6.05E-04 |
| 29 | GO:0010375: stomatal complex patterning | 6.05E-04 |
| 30 | GO:0048359: mucilage metabolic process involved in seed coat development | 6.05E-04 |
| 31 | GO:0046855: inositol phosphate dephosphorylation | 7.40E-04 |
| 32 | GO:0006655: phosphatidylglycerol biosynthetic process | 7.40E-04 |
| 33 | GO:0009117: nucleotide metabolic process | 7.40E-04 |
| 34 | GO:0006206: pyrimidine nucleobase metabolic process | 7.40E-04 |
| 35 | GO:0009658: chloroplast organization | 7.67E-04 |
| 36 | GO:1901259: chloroplast rRNA processing | 8.82E-04 |
| 37 | GO:0042372: phylloquinone biosynthetic process | 8.82E-04 |
| 38 | GO:0046654: tetrahydrofolate biosynthetic process | 8.82E-04 |
| 39 | GO:0009955: adaxial/abaxial pattern specification | 8.82E-04 |
| 40 | GO:0006826: iron ion transport | 1.03E-03 |
| 41 | GO:0009772: photosynthetic electron transport in photosystem II | 1.03E-03 |
| 42 | GO:0042255: ribosome assembly | 1.18E-03 |
| 43 | GO:0006353: DNA-templated transcription, termination | 1.18E-03 |
| 44 | GO:0008643: carbohydrate transport | 1.27E-03 |
| 45 | GO:0034765: regulation of ion transmembrane transport | 1.52E-03 |
| 46 | GO:0015780: nucleotide-sugar transport | 1.52E-03 |
| 47 | GO:0006779: porphyrin-containing compound biosynthetic process | 1.69E-03 |
| 48 | GO:0008152: metabolic process | 1.83E-03 |
| 49 | GO:0006415: translational termination | 2.07E-03 |
| 50 | GO:0006790: sulfur compound metabolic process | 2.27E-03 |
| 51 | GO:0016024: CDP-diacylglycerol biosynthetic process | 2.27E-03 |
| 52 | GO:0006541: glutamine metabolic process | 2.68E-03 |
| 53 | GO:0019853: L-ascorbic acid biosynthetic process | 2.89E-03 |
| 54 | GO:0010039: response to iron ion | 2.89E-03 |
| 55 | GO:0046854: phosphatidylinositol phosphorylation | 2.89E-03 |
| 56 | GO:0009116: nucleoside metabolic process | 3.34E-03 |
| 57 | GO:0006418: tRNA aminoacylation for protein translation | 3.57E-03 |
| 58 | GO:0051260: protein homooligomerization | 3.81E-03 |
| 59 | GO:0009646: response to absence of light | 5.61E-03 |
| 60 | GO:0008654: phospholipid biosynthetic process | 5.89E-03 |
| 61 | GO:0080167: response to karrikin | 7.26E-03 |
| 62 | GO:0007267: cell-cell signaling | 7.35E-03 |
| 63 | GO:0071805: potassium ion transmembrane transport | 7.35E-03 |
| 64 | GO:0010029: regulation of seed germination | 8.28E-03 |
| 65 | GO:0009817: defense response to fungus, incompatible interaction | 9.59E-03 |
| 66 | GO:0032259: methylation | 1.03E-02 |
| 67 | GO:0010119: regulation of stomatal movement | 1.06E-02 |
| 68 | GO:0006839: mitochondrial transport | 1.24E-02 |
| 69 | GO:0051707: response to other organism | 1.35E-02 |
| 70 | GO:0042538: hyperosmotic salinity response | 1.59E-02 |
| 71 | GO:0006096: glycolytic process | 1.88E-02 |
| 72 | GO:0009742: brassinosteroid mediated signaling pathway | 2.24E-02 |
| 73 | GO:0009793: embryo development ending in seed dormancy | 2.36E-02 |
| 74 | GO:0009058: biosynthetic process | 2.62E-02 |
| 75 | GO:0016036: cellular response to phosphate starvation | 3.02E-02 |
| 76 | GO:0040008: regulation of growth | 3.07E-02 |
| 77 | GO:0007166: cell surface receptor signaling pathway | 3.49E-02 |
| 78 | GO:0008380: RNA splicing | 3.60E-02 |
| 79 | GO:0015031: protein transport | 4.89E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity | 0.00E+00 |
| 2 | GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity | 0.00E+00 |
| 3 | GO:0015269: calcium-activated potassium channel activity | 0.00E+00 |
| 4 | GO:0004851: uroporphyrin-III C-methyltransferase activity | 0.00E+00 |
| 5 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 6 | GO:0042586: peptide deformylase activity | 5.94E-05 |
| 7 | GO:0009374: biotin binding | 5.94E-05 |
| 8 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 5.94E-05 |
| 9 | GO:0030794: (S)-coclaurine-N-methyltransferase activity | 5.94E-05 |
| 10 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 5.94E-05 |
| 11 | GO:0004560: alpha-L-fucosidase activity | 5.94E-05 |
| 12 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 5.94E-05 |
| 13 | GO:0004831: tyrosine-tRNA ligase activity | 5.94E-05 |
| 14 | GO:0004071: aspartate-ammonia ligase activity | 5.94E-05 |
| 15 | GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity | 1.44E-04 |
| 16 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 1.44E-04 |
| 17 | GO:0004150: dihydroneopterin aldolase activity | 1.44E-04 |
| 18 | GO:0102083: 7,8-dihydromonapterin aldolase activity | 1.44E-04 |
| 19 | GO:0052832: inositol monophosphate 3-phosphatase activity | 1.44E-04 |
| 20 | GO:0008479: queuine tRNA-ribosyltransferase activity | 1.44E-04 |
| 21 | GO:0008934: inositol monophosphate 1-phosphatase activity | 1.44E-04 |
| 22 | GO:0052833: inositol monophosphate 4-phosphatase activity | 1.44E-04 |
| 23 | GO:0035529: NADH pyrophosphatase activity | 3.57E-04 |
| 24 | GO:0016149: translation release factor activity, codon specific | 3.57E-04 |
| 25 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 3.57E-04 |
| 26 | GO:0004659: prenyltransferase activity | 4.78E-04 |
| 27 | GO:0004845: uracil phosphoribosyltransferase activity | 4.78E-04 |
| 28 | GO:0004040: amidase activity | 6.05E-04 |
| 29 | GO:0003989: acetyl-CoA carboxylase activity | 6.05E-04 |
| 30 | GO:0016462: pyrophosphatase activity | 7.40E-04 |
| 31 | GO:0015271: outward rectifier potassium channel activity | 7.40E-04 |
| 32 | GO:0004605: phosphatidate cytidylyltransferase activity | 7.40E-04 |
| 33 | GO:0004849: uridine kinase activity | 8.82E-04 |
| 34 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 8.82E-04 |
| 35 | GO:0005267: potassium channel activity | 1.35E-03 |
| 36 | GO:0003747: translation release factor activity | 1.52E-03 |
| 37 | GO:0004089: carbonate dehydratase activity | 2.47E-03 |
| 38 | GO:0031072: heat shock protein binding | 2.47E-03 |
| 39 | GO:0019843: rRNA binding | 2.77E-03 |
| 40 | GO:0051119: sugar transmembrane transporter activity | 2.89E-03 |
| 41 | GO:0005216: ion channel activity | 3.57E-03 |
| 42 | GO:0003727: single-stranded RNA binding | 4.55E-03 |
| 43 | GO:0008514: organic anion transmembrane transporter activity | 4.55E-03 |
| 44 | GO:0004812: aminoacyl-tRNA ligase activity | 4.81E-03 |
| 45 | GO:0008168: methyltransferase activity | 5.65E-03 |
| 46 | GO:0019901: protein kinase binding | 5.89E-03 |
| 47 | GO:0052689: carboxylic ester hydrolase activity | 8.03E-03 |
| 48 | GO:0008236: serine-type peptidase activity | 9.25E-03 |
| 49 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.13E-02 |
| 50 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.51E-02 |
| 51 | GO:0003690: double-stranded DNA binding | 1.71E-02 |
| 52 | GO:0022857: transmembrane transporter activity | 2.06E-02 |
| 53 | GO:0051082: unfolded protein binding | 2.15E-02 |
| 54 | GO:0016740: transferase activity | 2.33E-02 |
| 55 | GO:0016758: transferase activity, transferring hexosyl groups | 2.47E-02 |
| 56 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 3.02E-02 |
| 57 | GO:0008194: UDP-glycosyltransferase activity | 3.44E-02 |
| 58 | GO:0016788: hydrolase activity, acting on ester bonds | 4.38E-02 |
| 59 | GO:0008233: peptidase activity | 4.98E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 3.55E-12 |
| 2 | GO:0009570: chloroplast stroma | 3.36E-10 |
| 3 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 5.94E-05 |
| 4 | GO:0009941: chloroplast envelope | 6.08E-05 |
| 5 | GO:0009536: plastid | 6.90E-05 |
| 6 | GO:0009317: acetyl-CoA carboxylase complex | 2.46E-04 |
| 7 | GO:0009535: chloroplast thylakoid membrane | 2.78E-04 |
| 8 | GO:0009526: plastid envelope | 4.78E-04 |
| 9 | GO:0055035: plastid thylakoid membrane | 6.05E-04 |
| 10 | GO:0005763: mitochondrial small ribosomal subunit | 1.52E-03 |
| 11 | GO:0009508: plastid chromosome | 2.47E-03 |
| 12 | GO:0009534: chloroplast thylakoid | 4.23E-03 |
| 13 | GO:0046658: anchored component of plasma membrane | 5.02E-03 |
| 14 | GO:0031225: anchored component of membrane | 5.85E-03 |
| 15 | GO:0031969: chloroplast membrane | 7.26E-03 |
| 16 | GO:0009295: nucleoid | 7.35E-03 |
| 17 | GO:0009706: chloroplast inner membrane | 2.15E-02 |
| 18 | GO:0009579: thylakoid | 2.29E-02 |