Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G17180

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0015995: chlorophyll biosynthetic process8.97E-09
2GO:0032544: plastid translation2.97E-05
3GO:0043266: regulation of potassium ion transport5.64E-05
4GO:0000481: maturation of 5S rRNA5.64E-05
5GO:2000021: regulation of ion homeostasis5.64E-05
6GO:0034337: RNA folding5.64E-05
7GO:0010729: positive regulation of hydrogen peroxide biosynthetic process5.64E-05
8GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process5.64E-05
9GO:0010541: acropetal auxin transport1.37E-04
10GO:0010270: photosystem II oxygen evolving complex assembly1.37E-04
11GO:0046741: transport of virus in host, tissue to tissue1.37E-04
12GO:0006518: peptide metabolic process2.34E-04
13GO:0045493: xylan catabolic process2.34E-04
14GO:2001295: malonyl-CoA biosynthetic process2.34E-04
15GO:0010160: formation of animal organ boundary2.34E-04
16GO:0010306: rhamnogalacturonan II biosynthetic process3.41E-04
17GO:0010731: protein glutathionylation3.41E-04
18GO:0034059: response to anoxia3.41E-04
19GO:0043481: anthocyanin accumulation in tissues in response to UV light3.41E-04
20GO:0045727: positive regulation of translation4.56E-04
21GO:0000304: response to singlet oxygen5.78E-04
22GO:0006655: phosphatidylglycerol biosynthetic process7.07E-04
23GO:0060918: auxin transport7.07E-04
24GO:0006828: manganese ion transport7.07E-04
25GO:0032508: DNA duplex unwinding1.13E-03
26GO:0010206: photosystem II repair1.45E-03
27GO:0009051: pentose-phosphate shunt, oxidative branch1.45E-03
28GO:0006816: calcium ion transport1.97E-03
29GO:0008361: regulation of cell size2.16E-03
30GO:0016024: CDP-diacylglycerol biosynthetic process2.16E-03
31GO:0006006: glucose metabolic process2.36E-03
32GO:0009718: anthocyanin-containing compound biosynthetic process2.36E-03
33GO:0010540: basipetal auxin transport2.56E-03
34GO:0010030: positive regulation of seed germination2.76E-03
35GO:0007017: microtubule-based process3.40E-03
36GO:0031408: oxylipin biosynthetic process3.63E-03
37GO:0048443: stamen development4.34E-03
38GO:0009789: positive regulation of abscisic acid-activated signaling pathway4.58E-03
39GO:0000413: protein peptidyl-prolyl isomerization4.83E-03
40GO:0042631: cellular response to water deprivation4.83E-03
41GO:0009958: positive gravitropism5.09E-03
42GO:0048868: pollen tube development5.09E-03
43GO:0000302: response to reactive oxygen species5.88E-03
44GO:0002229: defense response to oomycetes5.88E-03
45GO:0010583: response to cyclopentenone6.15E-03
46GO:0007264: small GTPase mediated signal transduction6.15E-03
47GO:0030163: protein catabolic process6.43E-03
48GO:0009639: response to red or far red light6.71E-03
49GO:0051607: defense response to virus7.29E-03
50GO:0009615: response to virus7.59E-03
51GO:0015979: photosynthesis7.73E-03
52GO:0010411: xyloglucan metabolic process8.50E-03
53GO:0016042: lipid catabolic process9.72E-03
54GO:0009407: toxin catabolic process9.78E-03
55GO:0010218: response to far red light9.78E-03
56GO:0048527: lateral root development1.01E-02
57GO:0009637: response to blue light1.08E-02
58GO:0008152: metabolic process1.10E-02
59GO:0009409: response to cold1.10E-02
60GO:0034599: cellular response to oxidative stress1.11E-02
61GO:0030001: metal ion transport1.18E-02
62GO:0006631: fatty acid metabolic process1.22E-02
63GO:0009926: auxin polar transport1.29E-02
64GO:0009640: photomorphogenesis1.29E-02
65GO:0009636: response to toxic substance1.40E-02
66GO:0042538: hyperosmotic salinity response1.51E-02
67GO:0006364: rRNA processing1.59E-02
68GO:0009735: response to cytokinin1.63E-02
69GO:0009416: response to light stimulus1.78E-02
70GO:0009624: response to nematode2.04E-02
71GO:0045893: positive regulation of transcription, DNA-templated2.05E-02
72GO:0042744: hydrogen peroxide catabolic process2.63E-02
73GO:0006633: fatty acid biosynthetic process2.82E-02
74GO:0045490: pectin catabolic process3.02E-02
75GO:0009739: response to gibberellin3.27E-02
76GO:0071555: cell wall organization3.61E-02
77GO:0009733: response to auxin4.04E-02
78GO:0009658: chloroplast organization4.12E-02
79GO:0009860: pollen tube growth4.34E-02
80GO:0009723: response to ethylene4.57E-02
81GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway4.91E-02
RankGO TermAdjusted P value
1GO:0061634: alpha-D-xyloside xylohydrolase0.00E+00
2GO:0080176: xyloglucan 1,6-alpha-xylosidase activity0.00E+00
3GO:0046406: magnesium protoporphyrin IX methyltransferase activity0.00E+00
4GO:0016851: magnesium chelatase activity1.75E-06
5GO:0005528: FK506 binding2.60E-06
6GO:0003755: peptidyl-prolyl cis-trans isomerase activity3.46E-06
7GO:0004033: aldo-keto reductase (NADP) activity2.31E-05
8GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity5.64E-05
9GO:0004075: biotin carboxylase activity2.34E-04
10GO:0045174: glutathione dehydrogenase (ascorbate) activity2.34E-04
11GO:0070330: aromatase activity2.34E-04
12GO:0009044: xylan 1,4-beta-xylosidase activity4.56E-04
13GO:0046556: alpha-L-arabinofuranosidase activity4.56E-04
14GO:0004345: glucose-6-phosphate dehydrogenase activity4.56E-04
15GO:0018685: alkane 1-monooxygenase activity5.78E-04
16GO:0003989: acetyl-CoA carboxylase activity5.78E-04
17GO:0004130: cytochrome-c peroxidase activity7.07E-04
18GO:0004366: glycerol-3-phosphate O-acyltransferase activity7.07E-04
19GO:0051920: peroxiredoxin activity8.44E-04
20GO:0004364: glutathione transferase activity1.06E-03
21GO:0016209: antioxidant activity1.13E-03
22GO:0005384: manganese ion transmembrane transporter activity1.62E-03
23GO:0005515: protein binding2.00E-03
24GO:0015095: magnesium ion transmembrane transporter activity2.36E-03
25GO:0010329: auxin efflux transmembrane transporter activity2.36E-03
26GO:0008266: poly(U) RNA binding2.56E-03
27GO:0019843: rRNA binding2.58E-03
28GO:0016829: lyase activity2.79E-03
29GO:0030570: pectate lyase activity4.10E-03
30GO:0050662: coenzyme binding5.35E-03
31GO:0004601: peroxidase activity5.47E-03
32GO:0016788: hydrolase activity, acting on ester bonds5.57E-03
33GO:0005200: structural constituent of cytoskeleton7.00E-03
34GO:0016597: amino acid binding7.29E-03
35GO:0052689: carboxylic ester hydrolase activity7.49E-03
36GO:0008236: serine-type peptidase activity8.81E-03
37GO:0005096: GTPase activator activity9.45E-03
38GO:0004222: metalloendopeptidase activity9.78E-03
39GO:0003924: GTPase activity1.00E-02
40GO:0050661: NADP binding1.18E-02
41GO:0043621: protein self-association1.36E-02
42GO:0003690: double-stranded DNA binding1.63E-02
43GO:0004650: polygalacturonase activity1.92E-02
44GO:0030246: carbohydrate binding2.40E-02
45GO:0004252: serine-type endopeptidase activity2.58E-02
46GO:0005516: calmodulin binding2.68E-02
47GO:0005525: GTP binding2.93E-02
48GO:0042626: ATPase activity, coupled to transmembrane movement of substances3.58E-02
49GO:0016491: oxidoreductase activity4.73E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast1.84E-15
2GO:0009534: chloroplast thylakoid3.52E-14
3GO:0009570: chloroplast stroma9.28E-13
4GO:0009941: chloroplast envelope2.40E-11
5GO:0009543: chloroplast thylakoid lumen2.38E-10
6GO:0009535: chloroplast thylakoid membrane2.29E-08
7GO:0031977: thylakoid lumen3.77E-08
8GO:0010007: magnesium chelatase complex7.23E-07
9GO:0009533: chloroplast stromal thylakoid1.74E-05
10GO:0009579: thylakoid9.27E-05
11GO:0010287: plastoglobule2.48E-04
12GO:0031969: chloroplast membrane9.16E-04
13GO:0045298: tubulin complex1.45E-03
14GO:0009505: plant-type cell wall2.05E-03
15GO:0032040: small-subunit processome2.16E-03
16GO:0043234: protein complex2.97E-03
17GO:0009536: plastid9.66E-03
18GO:0015934: large ribosomal subunit1.01E-02
19GO:0048046: apoplast1.03E-02
20GO:0005618: cell wall1.17E-02
21GO:0009706: chloroplast inner membrane2.04E-02
22GO:0009705: plant-type vacuole membrane3.02E-02
23GO:0005874: microtubule4.68E-02
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Gene type



Gene DE type