Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G16720

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0044843: cell cycle G1/S phase transition0.00E+00
2GO:0009967: positive regulation of signal transduction0.00E+00
3GO:0006412: translation1.43E-125
4GO:0042254: ribosome biogenesis2.33E-47
5GO:0000027: ribosomal large subunit assembly3.39E-13
6GO:0009735: response to cytokinin1.06E-07
7GO:0009955: adaxial/abaxial pattern specification5.39E-07
8GO:0000028: ribosomal small subunit assembly1.36E-06
9GO:0006364: rRNA processing3.42E-06
10GO:0002181: cytoplasmic translation4.02E-06
11GO:0042274: ribosomal small subunit biogenesis1.75E-05
12GO:0071215: cellular response to abscisic acid stimulus4.27E-05
13GO:0006407: rRNA export from nucleus1.48E-04
14GO:0030490: maturation of SSU-rRNA1.48E-04
15GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)1.48E-04
16GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)1.48E-04
17GO:0009793: embryo development ending in seed dormancy2.95E-04
18GO:0048569: post-embryonic animal organ development3.38E-04
19GO:0006626: protein targeting to mitochondrion3.47E-04
20GO:0009965: leaf morphogenesis5.32E-04
21GO:0010476: gibberellin mediated signaling pathway5.54E-04
22GO:0042256: mature ribosome assembly5.54E-04
23GO:0040007: growth7.78E-04
24GO:0070301: cellular response to hydrogen peroxide7.93E-04
25GO:0006241: CTP biosynthetic process7.93E-04
26GO:0006165: nucleoside diphosphate phosphorylation7.93E-04
27GO:0006228: UTP biosynthetic process7.93E-04
28GO:0044205: 'de novo' UMP biosynthetic process1.05E-03
29GO:0006183: GTP biosynthetic process1.05E-03
30GO:0009409: response to cold1.25E-03
31GO:0071493: cellular response to UV-B1.33E-03
32GO:0009845: seed germination1.51E-03
33GO:0006414: translational elongation1.60E-03
34GO:0000470: maturation of LSU-rRNA1.63E-03
35GO:0000911: cytokinesis by cell plate formation1.96E-03
36GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process2.30E-03
37GO:0001558: regulation of cell growth3.04E-03
38GO:0006526: arginine biosynthetic process3.04E-03
39GO:0000387: spliceosomal snRNP assembly3.86E-03
40GO:0008283: cell proliferation3.90E-03
41GO:0009644: response to high light intensity4.22E-03
42GO:0010015: root morphogenesis4.73E-03
43GO:0006913: nucleocytoplasmic transport4.73E-03
44GO:0006820: anion transport5.20E-03
45GO:0010229: inflorescence development5.68E-03
46GO:0010102: lateral root morphogenesis5.68E-03
47GO:0006417: regulation of translation5.81E-03
48GO:0046686: response to cadmium ion5.96E-03
49GO:0006541: glutamine metabolic process6.17E-03
50GO:0048367: shoot system development6.40E-03
51GO:0030150: protein import into mitochondrial matrix7.74E-03
52GO:0051302: regulation of cell division8.29E-03
53GO:0007005: mitochondrion organization9.43E-03
54GO:0000413: protein peptidyl-prolyl isomerization1.19E-02
55GO:0009749: response to glucose1.39E-02
56GO:0009791: post-embryonic development1.39E-02
57GO:0032502: developmental process1.52E-02
58GO:0010090: trichome morphogenesis1.59E-02
59GO:0006811: ion transport2.45E-02
60GO:0010043: response to zinc ion2.53E-02
61GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process3.71E-02
62GO:0048364: root development3.83E-02
63GO:0009620: response to fungus4.81E-02
RankGO TermAdjusted P value
1GO:0016018: cyclosporin A binding0.00E+00
2GO:0005078: MAP-kinase scaffold activity0.00E+00
3GO:0003735: structural constituent of ribosome7.32E-152
4GO:0003729: mRNA binding2.22E-40
5GO:0019843: rRNA binding2.56E-11
6GO:0008097: 5S rRNA binding9.39E-06
7GO:0004088: carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity1.48E-04
8GO:0032947: protein complex scaffold5.54E-04
9GO:0070181: small ribosomal subunit rRNA binding5.54E-04
10GO:0003723: RNA binding7.15E-04
11GO:0004550: nucleoside diphosphate kinase activity7.93E-04
12GO:0008235: metalloexopeptidase activity2.30E-03
13GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity2.40E-03
14GO:0015288: porin activity2.66E-03
15GO:0008308: voltage-gated anion channel activity3.04E-03
16GO:0015266: protein channel activity5.68E-03
17GO:0004871: signal transducer activity6.23E-03
18GO:0000166: nucleotide binding1.59E-02
19GO:0003746: translation elongation factor activity2.70E-02
20GO:0003755: peptidyl-prolyl cis-trans isomerase activity3.61E-02
RankGO TermAdjusted P value
1GO:0043186: P granule0.00E+00
2GO:0022626: cytosolic ribosome3.80E-125
3GO:0022625: cytosolic large ribosomal subunit1.67E-90
4GO:0005840: ribosome3.15E-83
5GO:0022627: cytosolic small ribosomal subunit1.38E-59
6GO:0005730: nucleolus4.78E-46
7GO:0005829: cytosol3.27E-39
8GO:0005737: cytoplasm1.82E-35
9GO:0009506: plasmodesma8.52E-35
10GO:0015934: large ribosomal subunit4.85E-26
11GO:0016020: membrane1.35E-17
12GO:0005774: vacuolar membrane8.45E-16
13GO:0015935: small ribosomal subunit7.71E-13
14GO:0005773: vacuole5.89E-12
15GO:0005618: cell wall6.26E-11
16GO:0005886: plasma membrane1.47E-10
17GO:0009507: chloroplast1.13E-05
18GO:0005742: mitochondrial outer membrane translocase complex1.30E-04
19GO:0005951: carbamoyl-phosphate synthase complex1.48E-04
20GO:0030686: 90S preribosome1.48E-04
21GO:0034719: SMN-Sm protein complex5.54E-04
22GO:0005853: eukaryotic translation elongation factor 1 complex5.54E-04
23GO:0005682: U5 snRNP1.05E-03
24GO:0005687: U4 snRNP1.33E-03
25GO:0097526: spliceosomal tri-snRNP complex1.33E-03
26GO:0005689: U12-type spliceosomal complex1.96E-03
27GO:0005622: intracellular2.18E-03
28GO:0071004: U2-type prespliceosome2.66E-03
29GO:0046930: pore complex3.04E-03
30GO:0005685: U1 snRNP3.44E-03
31GO:0071011: precatalytic spliceosome3.86E-03
32GO:0005686: U2 snRNP4.29E-03
33GO:0071013: catalytic step 2 spliceosome4.73E-03
34GO:0019013: viral nucleocapsid5.68E-03
35GO:0005834: heterotrimeric G-protein complex6.61E-03
36GO:0005758: mitochondrial intermembrane space7.74E-03
37GO:0005741: mitochondrial outer membrane8.85E-03
38GO:0030529: intracellular ribonucleoprotein complex1.89E-02
39GO:0005743: mitochondrial inner membrane3.42E-02
40GO:0005681: spliceosomal complex4.50E-02
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Gene type



Gene DE type