Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G16190

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1901799: negative regulation of proteasomal protein catabolic process0.00E+00
2GO:0010111: glyoxysome organization0.00E+00
3GO:0098755: maintenance of seed dormancy by absisic acid0.00E+00
4GO:0045022: early endosome to late endosome transport0.00E+00
5GO:0098721: uracil import across plasma membrane5.03E-05
6GO:0006144: purine nucleobase metabolic process5.03E-05
7GO:0010201: response to continuous far red light stimulus by the high-irradiance response system5.03E-05
8GO:0098702: adenine import across plasma membrane5.03E-05
9GO:1903648: positive regulation of chlorophyll catabolic process5.03E-05
10GO:0098710: guanine import across plasma membrane5.03E-05
11GO:0019628: urate catabolic process5.03E-05
12GO:0000303: response to superoxide5.03E-05
13GO:0035344: hypoxanthine transport5.03E-05
14GO:0019395: fatty acid oxidation1.23E-04
15GO:0010608: posttranscriptional regulation of gene expression1.23E-04
16GO:1905182: positive regulation of urease activity1.23E-04
17GO:0006672: ceramide metabolic process1.23E-04
18GO:0080055: low-affinity nitrate transport2.11E-04
19GO:0045039: protein import into mitochondrial inner membrane2.11E-04
20GO:0006624: vacuolar protein processing3.09E-04
21GO:0006809: nitric oxide biosynthetic process3.09E-04
22GO:0006635: fatty acid beta-oxidation3.23E-04
23GO:0016567: protein ubiquitination3.32E-04
24GO:0006878: cellular copper ion homeostasis4.15E-04
25GO:1903830: magnesium ion transmembrane transport4.15E-04
26GO:0009723: response to ethylene7.01E-04
27GO:0006333: chromatin assembly or disassembly8.97E-04
28GO:0015693: magnesium ion transport8.97E-04
29GO:0009610: response to symbiotic fungus8.97E-04
30GO:0006955: immune response8.97E-04
31GO:0006614: SRP-dependent cotranslational protein targeting to membrane8.97E-04
32GO:1900057: positive regulation of leaf senescence8.97E-04
33GO:0000209: protein polyubiquitination9.98E-04
34GO:0006605: protein targeting1.03E-03
35GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.15E-03
36GO:0051603: proteolysis involved in cellular protein catabolic process1.32E-03
37GO:0090332: stomatal closure1.47E-03
38GO:0010629: negative regulation of gene expression1.63E-03
39GO:0043085: positive regulation of catalytic activity1.79E-03
40GO:0071365: cellular response to auxin stimulus1.96E-03
41GO:0012501: programmed cell death1.96E-03
42GO:0015706: nitrate transport1.96E-03
43GO:0010102: lateral root morphogenesis2.14E-03
44GO:0006807: nitrogen compound metabolic process2.14E-03
45GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process2.14E-03
46GO:0007034: vacuolar transport2.32E-03
47GO:0007031: peroxisome organization2.50E-03
48GO:2000377: regulation of reactive oxygen species metabolic process2.88E-03
49GO:0030150: protein import into mitochondrial matrix2.88E-03
50GO:0009695: jasmonic acid biosynthetic process3.08E-03
51GO:0031408: oxylipin biosynthetic process3.29E-03
52GO:0009737: response to abscisic acid3.66E-03
53GO:0006012: galactose metabolic process3.71E-03
54GO:0009789: positive regulation of abscisic acid-activated signaling pathway4.15E-03
55GO:0010197: polar nucleus fusion4.60E-03
56GO:0006623: protein targeting to vacuole5.07E-03
57GO:0006970: response to osmotic stress5.09E-03
58GO:0010193: response to ozone5.32E-03
59GO:0016032: viral process5.56E-03
60GO:0030163: protein catabolic process5.81E-03
61GO:0010200: response to chitin6.06E-03
62GO:0006464: cellular protein modification process6.07E-03
63GO:0006914: autophagy6.07E-03
64GO:0006979: response to oxidative stress6.24E-03
65GO:0009788: negative regulation of abscisic acid-activated signaling pathway7.12E-03
66GO:0010029: regulation of seed germination7.12E-03
67GO:0009816: defense response to bacterium, incompatible interaction7.12E-03
68GO:0042128: nitrate assimilation7.40E-03
69GO:0006950: response to stress7.68E-03
70GO:0015031: protein transport8.38E-03
71GO:0006499: N-terminal protein myristoylation8.82E-03
72GO:0007568: aging9.12E-03
73GO:0016051: carbohydrate biosynthetic process9.73E-03
74GO:0009867: jasmonic acid mediated signaling pathway9.73E-03
75GO:0006099: tricarboxylic acid cycle1.00E-02
76GO:0030001: metal ion transport1.07E-02
77GO:0006897: endocytosis1.10E-02
78GO:0009738: abscisic acid-activated signaling pathway1.49E-02
79GO:0006857: oligopeptide transport1.51E-02
80GO:0009611: response to wounding1.57E-02
81GO:0006511: ubiquitin-dependent protein catabolic process2.09E-02
82GO:0009845: seed germination2.29E-02
83GO:0009790: embryo development2.41E-02
84GO:0006508: proteolysis2.56E-02
85GO:0010150: leaf senescence2.72E-02
86GO:0009651: response to salt stress2.86E-02
87GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.95E-02
88GO:0009414: response to water deprivation3.04E-02
89GO:0042742: defense response to bacterium3.12E-02
90GO:0009409: response to cold4.21E-02
91GO:0044550: secondary metabolite biosynthetic process4.59E-02
RankGO TermAdjusted P value
1GO:0004846: urate oxidase activity0.00E+00
2GO:0015207: adenine transmembrane transporter activity5.03E-05
3GO:0015208: guanine transmembrane transporter activity5.03E-05
4GO:0015294: solute:cation symporter activity5.03E-05
5GO:0004175: endopeptidase activity8.62E-05
6GO:0047216: inositol 3-alpha-galactosyltransferase activity1.23E-04
7GO:0003988: acetyl-CoA C-acyltransferase activity1.23E-04
8GO:0003924: GTPase activity1.57E-04
9GO:0080054: low-affinity nitrate transmembrane transporter activity2.11E-04
10GO:0016151: nickel cation binding2.11E-04
11GO:0005047: signal recognition particle binding2.11E-04
12GO:0000975: regulatory region DNA binding2.11E-04
13GO:0030527: structural constituent of chromatin3.09E-04
14GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides3.09E-04
15GO:0004108: citrate (Si)-synthase activity3.09E-04
16GO:0004197: cysteine-type endopeptidase activity3.45E-04
17GO:0004842: ubiquitin-protein transferase activity3.69E-04
18GO:0015210: uracil transmembrane transporter activity4.15E-04
19GO:0070696: transmembrane receptor protein serine/threonine kinase binding5.26E-04
20GO:0008113: peptide-methionine (S)-S-oxide reductase activity7.68E-04
21GO:0003950: NAD+ ADP-ribosyltransferase activity7.68E-04
22GO:0005525: GTP binding8.56E-04
23GO:0004869: cysteine-type endopeptidase inhibitor activity1.03E-03
24GO:0015095: magnesium ion transmembrane transporter activity2.14E-03
25GO:0015266: protein channel activity2.14E-03
26GO:0031624: ubiquitin conjugating enzyme binding2.32E-03
27GO:0004190: aspartic-type endopeptidase activity2.50E-03
28GO:0046873: metal ion transmembrane transporter activity4.60E-03
29GO:0061630: ubiquitin protein ligase activity6.15E-03
30GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity8.24E-03
31GO:0005096: GTPase activator activity8.53E-03
32GO:0015293: symporter activity1.26E-02
33GO:0008234: cysteine-type peptidase activity1.54E-02
34GO:0022857: transmembrane transporter activity1.77E-02
35GO:0016758: transferase activity, transferring hexosyl groups2.12E-02
36GO:0005215: transporter activity3.45E-02
37GO:0046982: protein heterodimerization activity3.66E-02
38GO:0003682: chromatin binding3.86E-02
39GO:0043531: ADP binding3.96E-02
RankGO TermAdjusted P value
1GO:0005785: signal recognition particle receptor complex0.00E+00
2GO:0010009: cytoplasmic side of endosome membrane0.00E+00
3GO:0030139: endocytic vesicle2.11E-04
4GO:0000323: lytic vacuole3.09E-04
5GO:0016363: nuclear matrix7.68E-04
6GO:0031902: late endosome membrane8.91E-04
7GO:0005768: endosome9.96E-04
8GO:0031305: integral component of mitochondrial inner membrane1.03E-03
9GO:0005786: signal recognition particle, endoplasmic reticulum targeting1.17E-03
10GO:0009514: glyoxysome1.17E-03
11GO:0031901: early endosome membrane1.32E-03
12GO:0030665: clathrin-coated vesicle membrane1.47E-03
13GO:0017119: Golgi transport complex1.63E-03
14GO:0005764: lysosome2.32E-03
15GO:0005769: early endosome2.69E-03
16GO:0005777: peroxisome3.01E-03
17GO:0005741: mitochondrial outer membrane3.29E-03
18GO:0005615: extracellular space3.43E-03
19GO:0005744: mitochondrial inner membrane presequence translocase complex3.93E-03
20GO:0000785: chromatin5.56E-03
21GO:0016020: membrane5.87E-03
22GO:0005783: endoplasmic reticulum6.33E-03
23GO:0000151: ubiquitin ligase complex8.24E-03
24GO:0000502: proteasome complex1.44E-02
25GO:0005802: trans-Golgi network2.47E-02
26GO:0016021: integral component of membrane3.29E-02
27GO:0005886: plasma membrane4.37E-02
28GO:0005737: cytoplasm4.72E-02
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Gene type



Gene DE type