co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G14900

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0016236: macroautophagy	0.00E+00
2	GO:0046909: intermembrane transport	0.00E+00
3	GO:0010111: glyoxysome organization	0.00E+00
4	GO:0048024: regulation of mRNA splicing, via spliceosome	0.00E+00
5	GO:0010477: response to sulfur dioxide	0.00E+00
6	GO:0006376: mRNA splice site selection	1.20E-04
7	GO:0031338: regulation of vesicle fusion	1.20E-04
8	GO:0010201: response to continuous far red light stimulus by the high-irradiance response system	1.20E-04
9	GO:0051315: attachment of mitotic spindle microtubules to kinetochore	1.20E-04
10	GO:0048482: plant ovule morphogenesis	1.20E-04
11	GO:0030242: pexophagy	1.20E-04
12	GO:0000303: response to superoxide	1.20E-04
13	GO:0080136: priming of cellular response to stress	1.20E-04
14	GO:0007093: mitotic cell cycle checkpoint	1.20E-04
15	GO:0000719: photoreactive repair	2.77E-04
16	GO:2000693: positive regulation of seed maturation	2.77E-04
17	GO:0019395: fatty acid oxidation	2.77E-04
18	GO:0043631: RNA polyadenylation	2.77E-04
19	GO:0002240: response to molecule of oomycetes origin	2.77E-04
20	GO:0051258: protein polymerization	2.77E-04
21	GO:0006970: response to osmotic stress	4.38E-04
22	GO:0090630: activation of GTPase activity	4.58E-04
23	GO:0046621: negative regulation of organ growth	4.58E-04
24	GO:2000034: regulation of seed maturation	4.58E-04
25	GO:0010498: proteasomal protein catabolic process	4.58E-04
26	GO:0009737: response to abscisic acid	4.60E-04
27	GO:0009723: response to ethylene	4.90E-04
28	GO:0030433: ubiquitin-dependent ERAD pathway	5.41E-04
29	GO:0010200: response to chitin	5.73E-04
30	GO:0080119: ER body organization	6.57E-04
31	GO:2000114: regulation of establishment of cell polarity	6.57E-04
32	GO:0051259: protein oligomerization	6.57E-04
33	GO:0006809: nitric oxide biosynthetic process	6.57E-04
34	GO:0072583: clathrin-dependent endocytosis	6.57E-04
35	GO:2000038: regulation of stomatal complex development	8.72E-04
36	GO:0045324: late endosome to vacuole transport	8.72E-04
37	GO:0015994: chlorophyll metabolic process	8.72E-04
38	GO:0006635: fatty acid beta-oxidation	9.78E-04
39	GO:0016558: protein import into peroxisome matrix	1.10E-03
40	GO:0007094: mitotic spindle assembly checkpoint	1.10E-03
41	GO:0007029: endoplasmic reticulum organization	1.10E-03
42	GO:0032876: negative regulation of DNA endoreduplication	1.10E-03
43	GO:0043097: pyrimidine nucleoside salvage	1.10E-03
44	GO:0006914: autophagy	1.17E-03
45	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	1.35E-03
46	GO:0048232: male gamete generation	1.35E-03
47	GO:0048317: seed morphogenesis	1.35E-03
48	GO:0006206: pyrimidine nucleobase metabolic process	1.35E-03
49	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	1.35E-03
50	GO:2000037: regulation of stomatal complex patterning	1.61E-03
51	GO:0000911: cytokinesis by cell plate formation	1.61E-03
52	GO:0006950: response to stress	1.63E-03
53	GO:0015937: coenzyme A biosynthetic process	1.89E-03
54	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	1.89E-03
55	GO:0009610: response to symbiotic fungus	1.89E-03
56	GO:0032875: regulation of DNA endoreduplication	2.19E-03
57	GO:0048766: root hair initiation	2.19E-03
58	GO:0010120: camalexin biosynthetic process	2.50E-03
59	GO:0009821: alkaloid biosynthetic process	2.82E-03
60	GO:0016571: histone methylation	3.16E-03
61	GO:0008202: steroid metabolic process	3.16E-03
62	GO:0048268: clathrin coat assembly	3.16E-03
63	GO:0031627: telomeric loop formation	3.51E-03
64	GO:0010048: vernalization response	3.51E-03
65	GO:0010072: primary shoot apical meristem specification	3.88E-03
66	GO:0006378: mRNA polyadenylation	3.88E-03
67	GO:0010224: response to UV-B	4.06E-03
68	GO:0000266: mitochondrial fission	4.26E-03
69	GO:0008361: regulation of cell size	4.26E-03
70	GO:0006790: sulfur compound metabolic process	4.26E-03
71	GO:0012501: programmed cell death	4.26E-03
72	GO:0010229: inflorescence development	4.64E-03
73	GO:0055046: microgametogenesis	4.64E-03
74	GO:0010102: lateral root morphogenesis	4.64E-03
75	GO:0009626: plant-type hypersensitive response	4.94E-03
76	GO:0010030: positive regulation of seed germination	5.46E-03
77	GO:0010053: root epidermal cell differentiation	5.46E-03
78	GO:0007031: peroxisome organization	5.46E-03
79	GO:0007030: Golgi organization	5.46E-03
80	GO:0009825: multidimensional cell growth	5.46E-03
81	GO:0042023: DNA endoreduplication	5.88E-03
82	GO:2000377: regulation of reactive oxygen species metabolic process	6.32E-03
83	GO:0009695: jasmonic acid biosynthetic process	6.76E-03
84	GO:0031408: oxylipin biosynthetic process	7.22E-03
85	GO:0031348: negative regulation of defense response	7.69E-03
86	GO:0009411: response to UV	8.18E-03
87	GO:0010091: trichome branching	8.66E-03
88	GO:0009561: megagametogenesis	8.66E-03
89	GO:0051028: mRNA transport	9.17E-03
90	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	9.17E-03
91	GO:0010118: stomatal movement	9.68E-03
92	GO:0015031: protein transport	9.75E-03
93	GO:0010197: polar nucleus fusion	1.02E-02
94	GO:0061025: membrane fusion	1.07E-02
95	GO:0009555: pollen development	1.10E-02
96	GO:0006623: protein targeting to vacuole	1.13E-02
97	GO:0010183: pollen tube guidance	1.13E-02
98	GO:0000302: response to reactive oxygen species	1.18E-02
99	GO:0010193: response to ozone	1.18E-02
100	GO:0010583: response to cyclopentenone	1.24E-02
101	GO:0016032: viral process	1.24E-02
102	GO:0006464: cellular protein modification process	1.36E-02
103	GO:0010286: heat acclimation	1.41E-02
104	GO:0016579: protein deubiquitination	1.47E-02
105	GO:0009816: defense response to bacterium, incompatible interaction	1.60E-02
106	GO:0042128: nitrate assimilation	1.66E-02
107	GO:0006906: vesicle fusion	1.66E-02
108	GO:0006888: ER to Golgi vesicle-mediated transport	1.72E-02
109	GO:0016049: cell growth	1.79E-02
110	GO:0048481: plant ovule development	1.85E-02
111	GO:0048767: root hair elongation	1.92E-02
112	GO:0010311: lateral root formation	1.92E-02
113	GO:0009910: negative regulation of flower development	2.05E-02
114	GO:0009867: jasmonic acid mediated signaling pathway	2.19E-02
115	GO:0006886: intracellular protein transport	2.30E-02
116	GO:0006887: exocytosis	2.48E-02
117	GO:0006897: endocytosis	2.48E-02
118	GO:0006631: fatty acid metabolic process	2.48E-02
119	GO:0042542: response to hydrogen peroxide	2.55E-02
120	GO:0010114: response to red light	2.63E-02
121	GO:0006979: response to oxidative stress	2.70E-02
122	GO:0000209: protein polyubiquitination	2.70E-02
123	GO:0006397: mRNA processing	2.86E-02
124	GO:0031347: regulation of defense response	3.01E-02
125	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	3.01E-02
126	GO:0009846: pollen germination	3.09E-02
127	GO:0042538: hyperosmotic salinity response	3.09E-02
128	GO:0051603: proteolysis involved in cellular protein catabolic process	3.33E-02
129	GO:0009909: regulation of flower development	3.49E-02
130	GO:0016567: protein ubiquitination	3.57E-02
131	GO:0006096: glycolytic process	3.66E-02
132	GO:0009620: response to fungus	3.91E-02
133	GO:0009553: embryo sac development	4.09E-02
134	GO:0051726: regulation of cell cycle	4.35E-02

Rank	GO Term	Adjusted P value
1	GO:0008482: sulfite oxidase activity	0.00E+00
2	GO:0033550: MAP kinase tyrosine phosphatase activity	0.00E+00
3	GO:0008270: zinc ion binding	5.68E-05
4	GO:0008301: DNA binding, bending	1.20E-04
5	GO:0030544: Hsp70 protein binding	1.20E-04
6	GO:0005515: protein binding	1.77E-04
7	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.52E-04
8	GO:0004594: pantothenate kinase activity	2.77E-04
9	GO:0003988: acetyl-CoA C-acyltransferase activity	2.77E-04
10	GO:0043130: ubiquitin binding	4.09E-04
11	GO:0004652: polynucleotide adenylyltransferase activity	6.57E-04
12	GO:0004416: hydroxyacylglutathione hydrolase activity	6.57E-04
13	GO:0030276: clathrin binding	8.00E-04
14	GO:0003995: acyl-CoA dehydrogenase activity	8.72E-04
15	GO:0030151: molybdenum ion binding	1.10E-03
16	GO:0017137: Rab GTPase binding	1.10E-03
17	GO:0036402: proteasome-activating ATPase activity	1.35E-03
18	GO:0004332: fructose-bisphosphate aldolase activity	1.35E-03
19	GO:0004849: uridine kinase activity	1.61E-03
20	GO:0003730: mRNA 3'-UTR binding	1.61E-03
21	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	1.61E-03
22	GO:0003950: NAD+ ADP-ribosyltransferase activity	1.61E-03
23	GO:0005096: GTPase activator activity	1.89E-03
24	GO:0042162: telomeric DNA binding	1.89E-03
25	GO:0004869: cysteine-type endopeptidase inhibitor activity	2.19E-03
26	GO:0000166: nucleotide binding	2.32E-03
27	GO:0046982: protein heterodimerization activity	2.40E-03
28	GO:0008142: oxysterol binding	2.50E-03
29	GO:0005545: 1-phosphatidylinositol binding	3.51E-03
30	GO:0003691: double-stranded telomeric DNA binding	3.88E-03
31	GO:0005516: calmodulin binding	4.32E-03
32	GO:0017025: TBP-class protein binding	5.46E-03
33	GO:0004725: protein tyrosine phosphatase activity	5.88E-03
34	GO:0004707: MAP kinase activity	7.22E-03
35	GO:0016779: nucleotidyltransferase activity	7.69E-03
36	GO:0016491: oxidoreductase activity	1.03E-02
37	GO:0016853: isomerase activity	1.07E-02
38	GO:0004843: thiol-dependent ubiquitin-specific protease activity	1.18E-02
39	GO:0004672: protein kinase activity	1.21E-02
40	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.30E-02
41	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.41E-02
42	GO:0051213: dioxygenase activity	1.54E-02
43	GO:0008375: acetylglucosaminyltransferase activity	1.66E-02
44	GO:0003746: translation elongation factor activity	2.19E-02
45	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.19E-02
46	GO:0000149: SNARE binding	2.33E-02
47	GO:0005484: SNAP receptor activity	2.63E-02
48	GO:0035091: phosphatidylinositol binding	2.78E-02
49	GO:0005198: structural molecule activity	2.85E-02
50	GO:0045735: nutrient reservoir activity	3.66E-02
51	GO:0016301: kinase activity	3.83E-02
52	GO:0004842: ubiquitin-protein transferase activity	3.99E-02
53	GO:0016874: ligase activity	4.00E-02

Rank	GO Term	Adjusted P value
1	GO:0071561: nucleus-vacuole junction	0.00E+00
2	GO:0045334: clathrin-coated endocytic vesicle	1.20E-04
3	GO:0034271: phosphatidylinositol 3-kinase complex, class III, type I	1.20E-04
4	GO:0034272: phosphatidylinositol 3-kinase complex, class III, type II	1.20E-04
5	GO:0005634: nucleus	2.71E-04
6	GO:0035061: interchromatin granule	2.77E-04
7	GO:0030136: clathrin-coated vesicle	6.91E-04
8	GO:0000776: kinetochore	1.10E-03
9	GO:0072686: mitotic spindle	1.10E-03
10	GO:0005778: peroxisomal membrane	1.24E-03
11	GO:0030127: COPII vesicle coat	1.35E-03
12	GO:0031597: cytosolic proteasome complex	1.61E-03
13	GO:0016363: nuclear matrix	1.61E-03
14	GO:0005643: nuclear pore	1.81E-03
15	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	1.89E-03
16	GO:0031595: nuclear proteasome complex	1.89E-03
17	GO:0009514: glyoxysome	2.50E-03
18	GO:0000783: nuclear telomere cap complex	2.50E-03
19	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	2.76E-03
20	GO:0005777: peroxisome	2.87E-03
21	GO:0008540: proteasome regulatory particle, base subcomplex	3.16E-03
22	GO:0005789: endoplasmic reticulum membrane	3.44E-03
23	GO:0005635: nuclear envelope	4.21E-03
24	GO:0009574: preprophase band	4.64E-03
25	GO:0005737: cytoplasm	6.06E-03
26	GO:0005905: clathrin-coated pit	7.22E-03
27	GO:0005770: late endosome	1.02E-02
28	GO:0009504: cell plate	1.13E-02
29	GO:0000786: nucleosome	2.12E-02
30	GO:0005622: intracellular	2.27E-02
31	GO:0031902: late endosome membrane	2.48E-02
32	GO:0031201: SNARE complex	2.48E-02
33	GO:0005773: vacuole	2.94E-02
34	GO:0000502: proteasome complex	3.25E-02
35	GO:0005681: spliceosomal complex	3.66E-02
36	GO:0016607: nuclear speck	3.74E-02
37	GO:0012505: endomembrane system	4.09E-02
38	GO:0009706: chloroplast inner membrane	4.17E-02
39	GO:0005654: nucleoplasm	4.80E-02
40	GO:0005623: cell	4.99E-02