GO Enrichment Analysis of Co-expressed Genes with
AT4G12040
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006069: ethanol oxidation | 0.00E+00 |
| 2 | GO:0032780: negative regulation of ATPase activity | 0.00E+00 |
| 3 | GO:0046292: formaldehyde metabolic process | 0.00E+00 |
| 4 | GO:0006605: protein targeting | 1.36E-05 |
| 5 | GO:0048508: embryonic meristem development | 4.04E-05 |
| 6 | GO:0006805: xenobiotic metabolic process | 4.04E-05 |
| 7 | GO:0080173: male-female gamete recognition during double fertilization | 4.04E-05 |
| 8 | GO:0009945: radial axis specification | 1.00E-04 |
| 9 | GO:0019483: beta-alanine biosynthetic process | 1.00E-04 |
| 10 | GO:1902000: homogentisate catabolic process | 1.00E-04 |
| 11 | GO:0019441: tryptophan catabolic process to kynurenine | 1.00E-04 |
| 12 | GO:1905182: positive regulation of urease activity | 1.00E-04 |
| 13 | GO:0019521: D-gluconate metabolic process | 1.00E-04 |
| 14 | GO:0006212: uracil catabolic process | 1.00E-04 |
| 15 | GO:0010498: proteasomal protein catabolic process | 1.73E-04 |
| 16 | GO:0010359: regulation of anion channel activity | 1.73E-04 |
| 17 | GO:0043617: cellular response to sucrose starvation | 1.73E-04 |
| 18 | GO:0009072: aromatic amino acid family metabolic process | 1.73E-04 |
| 19 | GO:0010255: glucose mediated signaling pathway | 2.55E-04 |
| 20 | GO:0006464: cellular protein modification process | 2.95E-04 |
| 21 | GO:0006878: cellular copper ion homeostasis | 3.43E-04 |
| 22 | GO:0010222: stem vascular tissue pattern formation | 3.43E-04 |
| 23 | GO:0010363: regulation of plant-type hypersensitive response | 3.43E-04 |
| 24 | GO:0030308: negative regulation of cell growth | 4.37E-04 |
| 25 | GO:0035435: phosphate ion transmembrane transport | 5.37E-04 |
| 26 | GO:1902456: regulation of stomatal opening | 5.37E-04 |
| 27 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 5.37E-04 |
| 28 | GO:0006751: glutathione catabolic process | 5.37E-04 |
| 29 | GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation | 5.37E-04 |
| 30 | GO:0009267: cellular response to starvation | 5.37E-04 |
| 31 | GO:0009942: longitudinal axis specification | 6.40E-04 |
| 32 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 7.49E-04 |
| 33 | GO:0010038: response to metal ion | 7.49E-04 |
| 34 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 8.61E-04 |
| 35 | GO:0043562: cellular response to nitrogen levels | 9.77E-04 |
| 36 | GO:0006098: pentose-phosphate shunt | 1.10E-03 |
| 37 | GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway | 1.22E-03 |
| 38 | GO:0043069: negative regulation of programmed cell death | 1.35E-03 |
| 39 | GO:0043085: positive regulation of catalytic activity | 1.49E-03 |
| 40 | GO:0009738: abscisic acid-activated signaling pathway | 1.69E-03 |
| 41 | GO:0006807: nitrogen compound metabolic process | 1.77E-03 |
| 42 | GO:0007034: vacuolar transport | 1.92E-03 |
| 43 | GO:0055114: oxidation-reduction process | 2.02E-03 |
| 44 | GO:0030433: ubiquitin-dependent ERAD pathway | 2.89E-03 |
| 45 | GO:0009646: response to absence of light | 3.99E-03 |
| 46 | GO:0010583: response to cyclopentenone | 4.58E-03 |
| 47 | GO:0007264: small GTPase mediated signal transduction | 4.58E-03 |
| 48 | GO:0009651: response to salt stress | 4.70E-03 |
| 49 | GO:0006914: autophagy | 5.00E-03 |
| 50 | GO:0010286: heat acclimation | 5.21E-03 |
| 51 | GO:0008219: cell death | 6.77E-03 |
| 52 | GO:0006499: N-terminal protein myristoylation | 7.25E-03 |
| 53 | GO:0009407: toxin catabolic process | 7.25E-03 |
| 54 | GO:0010119: regulation of stomatal movement | 7.49E-03 |
| 55 | GO:0010043: response to zinc ion | 7.49E-03 |
| 56 | GO:0007568: aging | 7.49E-03 |
| 57 | GO:0009744: response to sucrose | 9.53E-03 |
| 58 | GO:0009636: response to toxic substance | 1.03E-02 |
| 59 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.20E-02 |
| 60 | GO:0048316: seed development | 1.35E-02 |
| 61 | GO:0009626: plant-type hypersensitive response | 1.38E-02 |
| 62 | GO:0009553: embryo sac development | 1.48E-02 |
| 63 | GO:0018105: peptidyl-serine phosphorylation | 1.54E-02 |
| 64 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.57E-02 |
| 65 | GO:0000398: mRNA splicing, via spliceosome | 1.67E-02 |
| 66 | GO:0006470: protein dephosphorylation | 2.45E-02 |
| 67 | GO:0015031: protein transport | 2.98E-02 |
| 68 | GO:0046777: protein autophosphorylation | 3.71E-02 |
| 69 | GO:0045892: negative regulation of transcription, DNA-templated | 4.07E-02 |
| 70 | GO:0009737: response to abscisic acid | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051903: S-(hydroxymethyl)glutathione dehydrogenase activity | 0.00E+00 |
| 2 | GO:0004157: dihydropyrimidinase activity | 0.00E+00 |
| 3 | GO:0042030: ATPase inhibitor activity | 0.00E+00 |
| 4 | GO:0016034: maleylacetoacetate isomerase activity | 0.00E+00 |
| 5 | GO:0080007: S-nitrosoglutathione reductase activity | 0.00E+00 |
| 6 | GO:0019786: Atg8-specific protease activity | 4.04E-05 |
| 7 | GO:0004112: cyclic-nucleotide phosphodiesterase activity | 4.04E-05 |
| 8 | GO:0019779: Atg8 activating enzyme activity | 1.00E-04 |
| 9 | GO:0004061: arylformamidase activity | 1.00E-04 |
| 10 | GO:0003840: gamma-glutamyltransferase activity | 1.73E-04 |
| 11 | GO:0036374: glutathione hydrolase activity | 1.73E-04 |
| 12 | GO:0003863: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity | 1.73E-04 |
| 13 | GO:0016151: nickel cation binding | 1.73E-04 |
| 14 | GO:0005047: signal recognition particle binding | 1.73E-04 |
| 15 | GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity | 2.55E-04 |
| 16 | GO:0019776: Atg8 ligase activity | 3.43E-04 |
| 17 | GO:0004301: epoxide hydrolase activity | 3.43E-04 |
| 18 | GO:0005496: steroid binding | 4.37E-04 |
| 19 | GO:0031386: protein tag | 4.37E-04 |
| 20 | GO:0036402: proteasome-activating ATPase activity | 5.37E-04 |
| 21 | GO:0005525: GTP binding | 5.54E-04 |
| 22 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 6.40E-04 |
| 23 | GO:0004656: procollagen-proline 4-dioxygenase activity | 6.40E-04 |
| 24 | GO:0008113: peptide-methionine (S)-S-oxide reductase activity | 6.40E-04 |
| 25 | GO:0003924: GTPase activity | 8.69E-04 |
| 26 | GO:0004022: alcohol dehydrogenase (NAD) activity | 1.77E-03 |
| 27 | GO:0005315: inorganic phosphate transmembrane transporter activity | 1.77E-03 |
| 28 | GO:0017025: TBP-class protein binding | 2.07E-03 |
| 29 | GO:0031418: L-ascorbic acid binding | 2.39E-03 |
| 30 | GO:0004298: threonine-type endopeptidase activity | 2.72E-03 |
| 31 | GO:0005516: calmodulin binding | 2.96E-03 |
| 32 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 5.21E-03 |
| 33 | GO:0051213: dioxygenase activity | 5.64E-03 |
| 34 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 6.09E-03 |
| 35 | GO:0004683: calmodulin-dependent protein kinase activity | 6.31E-03 |
| 36 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 7.99E-03 |
| 37 | GO:0004364: glutathione transferase activity | 9.27E-03 |
| 38 | GO:0016887: ATPase activity | 1.01E-02 |
| 39 | GO:0005198: structural molecule activity | 1.03E-02 |
| 40 | GO:0005507: copper ion binding | 1.65E-02 |
| 41 | GO:0005509: calcium ion binding | 2.16E-02 |
| 42 | GO:0046872: metal ion binding | 2.46E-02 |
| 43 | GO:0004601: peroxidase activity | 3.04E-02 |
| 44 | GO:0016491: oxidoreductase activity | 3.09E-02 |
| 45 | GO:0008233: peptidase activity | 3.50E-02 |
| 46 | GO:0004871: signal transducer activity | 4.16E-02 |
| 47 | GO:0004722: protein serine/threonine phosphatase activity | 4.30E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019822: P4 peroxisome | 0.00E+00 |
| 2 | GO:0005785: signal recognition particle receptor complex | 0.00E+00 |
| 3 | GO:0031972: chloroplast intermembrane space | 4.04E-05 |
| 4 | GO:0030139: endocytic vesicle | 1.73E-04 |
| 5 | GO:0005783: endoplasmic reticulum | 2.30E-04 |
| 6 | GO:0005775: vacuolar lumen | 2.55E-04 |
| 7 | GO:0005776: autophagosome | 3.43E-04 |
| 8 | GO:0000164: protein phosphatase type 1 complex | 4.37E-04 |
| 9 | GO:0031597: cytosolic proteasome complex | 6.40E-04 |
| 10 | GO:0031595: nuclear proteasome complex | 7.49E-04 |
| 11 | GO:0000421: autophagosome membrane | 8.61E-04 |
| 12 | GO:0000502: proteasome complex | 9.76E-04 |
| 13 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 9.77E-04 |
| 14 | GO:0008540: proteasome regulatory particle, base subcomplex | 1.22E-03 |
| 15 | GO:0005829: cytosol | 1.25E-03 |
| 16 | GO:0005623: cell | 1.74E-03 |
| 17 | GO:0016602: CCAAT-binding factor complex | 1.77E-03 |
| 18 | GO:0005794: Golgi apparatus | 1.91E-03 |
| 19 | GO:0005777: peroxisome | 2.10E-03 |
| 20 | GO:0005839: proteasome core complex | 2.72E-03 |
| 21 | GO:0031410: cytoplasmic vesicle | 2.89E-03 |
| 22 | GO:0005768: endosome | 3.76E-03 |
| 23 | GO:0005774: vacuolar membrane | 4.93E-03 |
| 24 | GO:0031902: late endosome membrane | 9.01E-03 |
| 25 | GO:0010008: endosome membrane | 1.35E-02 |
| 26 | GO:0012505: endomembrane system | 1.48E-02 |
| 27 | GO:0005802: trans-Golgi network | 1.86E-02 |
| 28 | GO:0005622: intracellular | 2.06E-02 |
| 29 | GO:0005759: mitochondrial matrix | 2.08E-02 |
| 30 | GO:0005874: microtubule | 3.45E-02 |
| 31 | GO:0005773: vacuole | 3.54E-02 |
| 32 | GO:0005789: endoplasmic reticulum membrane | 3.58E-02 |
| 33 | GO:0005737: cytoplasm | 3.83E-02 |