co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G11370

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
2	GO:0002376: immune system process	0.00E+00
3	GO:0006983: ER overload response	0.00E+00
4	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
5	GO:0002237: response to molecule of bacterial origin	1.21E-05
6	GO:0009697: salicylic acid biosynthetic process	2.66E-05
7	GO:0006564: L-serine biosynthetic process	2.66E-05
8	GO:0006014: D-ribose metabolic process	3.99E-05
9	GO:0009612: response to mechanical stimulus	5.62E-05
10	GO:0010120: camalexin biosynthetic process	1.22E-04
11	GO:0010200: response to chitin	1.25E-04
12	GO:0006772: thiamine metabolic process	1.42E-04
13	GO:0006805: xenobiotic metabolic process	1.42E-04
14	GO:0009700: indole phytoalexin biosynthetic process	1.42E-04
15	GO:1901183: positive regulation of camalexin biosynthetic process	1.42E-04
16	GO:0009270: response to humidity	1.42E-04
17	GO:0050691: regulation of defense response to virus by host	1.42E-04
18	GO:0010112: regulation of systemic acquired resistance	1.50E-04
19	GO:0043069: negative regulation of programmed cell death	2.13E-04
20	GO:0043066: negative regulation of apoptotic process	3.25E-04
21	GO:0019725: cellular homeostasis	3.25E-04
22	GO:0019441: tryptophan catabolic process to kynurenine	3.25E-04
23	GO:0097054: L-glutamate biosynthetic process	3.25E-04
24	GO:0000162: tryptophan biosynthetic process	4.63E-04
25	GO:0045793: positive regulation of cell size	5.33E-04
26	GO:0010186: positive regulation of cellular defense response	5.33E-04
27	GO:0071494: cellular response to UV-C	5.33E-04
28	GO:0010359: regulation of anion channel activity	5.33E-04
29	GO:0080055: low-affinity nitrate transport	5.33E-04
30	GO:0071456: cellular response to hypoxia	6.76E-04
31	GO:0009625: response to insect	7.35E-04
32	GO:0001676: long-chain fatty acid metabolic process	7.63E-04
33	GO:0010116: positive regulation of abscisic acid biosynthetic process	7.63E-04
34	GO:2001289: lipid X metabolic process	7.63E-04
35	GO:0009399: nitrogen fixation	7.63E-04
36	GO:0006537: glutamate biosynthetic process	7.63E-04
37	GO:0071786: endoplasmic reticulum tubular network organization	7.63E-04
38	GO:0006542: glutamine biosynthetic process	1.01E-03
39	GO:0080037: negative regulation of cytokinin-activated signaling pathway	1.01E-03
40	GO:0019676: ammonia assimilation cycle	1.01E-03
41	GO:0060548: negative regulation of cell death	1.01E-03
42	GO:0046345: abscisic acid catabolic process	1.01E-03
43	GO:1902584: positive regulation of response to water deprivation	1.01E-03
44	GO:0010188: response to microbial phytotoxin	1.01E-03
45	GO:0080142: regulation of salicylic acid biosynthetic process	1.01E-03
46	GO:0019252: starch biosynthetic process	1.14E-03
47	GO:0009229: thiamine diphosphate biosynthetic process	1.28E-03
48	GO:0045927: positive regulation of growth	1.28E-03
49	GO:2000762: regulation of phenylpropanoid metabolic process	1.28E-03
50	GO:0005513: detection of calcium ion	1.28E-03
51	GO:0010405: arabinogalactan protein metabolic process	1.57E-03
52	GO:0006751: glutathione catabolic process	1.57E-03
53	GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation	1.57E-03
54	GO:0018258: protein O-linked glycosylation via hydroxyproline	1.57E-03
55	GO:1902456: regulation of stomatal opening	1.57E-03
56	GO:0002238: response to molecule of fungal origin	1.57E-03
57	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	1.57E-03
58	GO:0009816: defense response to bacterium, incompatible interaction	1.84E-03
59	GO:0034389: lipid particle organization	1.88E-03
60	GO:0010150: leaf senescence	1.90E-03
61	GO:0042128: nitrate assimilation	1.95E-03
62	GO:1902074: response to salt	2.21E-03
63	GO:0050790: regulation of catalytic activity	2.21E-03
64	GO:0043090: amino acid import	2.21E-03
65	GO:1900056: negative regulation of leaf senescence	2.21E-03
66	GO:0080186: developmental vegetative growth	2.21E-03
67	GO:0009617: response to bacterium	2.38E-03
68	GO:0006979: response to oxidative stress	2.50E-03
69	GO:0006102: isocitrate metabolic process	2.56E-03
70	GO:0016559: peroxisome fission	2.56E-03
71	GO:0009819: drought recovery	2.56E-03
72	GO:0030162: regulation of proteolysis	2.56E-03
73	GO:0010043: response to zinc ion	2.61E-03
74	GO:0009737: response to abscisic acid	2.73E-03
75	GO:0030968: endoplasmic reticulum unfolded protein response	2.93E-03
76	GO:0043562: cellular response to nitrogen levels	2.93E-03
77	GO:0009808: lignin metabolic process	2.93E-03
78	GO:0006002: fructose 6-phosphate metabolic process	2.93E-03
79	GO:0006099: tricarboxylic acid cycle	2.99E-03
80	GO:0009835: fruit ripening	3.31E-03
81	GO:0043067: regulation of programmed cell death	3.71E-03
82	GO:0048354: mucilage biosynthetic process involved in seed coat development	3.71E-03
83	GO:0009636: response to toxic substance	4.13E-03
84	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	4.45E-03
85	GO:0000038: very long-chain fatty acid metabolic process	4.55E-03
86	GO:0009809: lignin biosynthetic process	4.95E-03
87	GO:0000266: mitochondrial fission	4.99E-03
88	GO:0015706: nitrate transport	4.99E-03
89	GO:0045454: cell redox homeostasis	5.45E-03
90	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	5.45E-03
91	GO:0006096: glycolytic process	5.85E-03
92	GO:0009266: response to temperature stimulus	5.92E-03
93	GO:0009626: plant-type hypersensitive response	6.23E-03
94	GO:0006952: defense response	6.24E-03
95	GO:0010053: root epidermal cell differentiation	6.41E-03
96	GO:0034976: response to endoplasmic reticulum stress	6.91E-03
97	GO:2000377: regulation of reactive oxygen species metabolic process	7.42E-03
98	GO:0006487: protein N-linked glycosylation	7.42E-03
99	GO:0009863: salicylic acid mediated signaling pathway	7.42E-03
100	GO:0007005: mitochondrion organization	9.05E-03
101	GO:0031348: negative regulation of defense response	9.05E-03
102	GO:0009814: defense response, incompatible interaction	9.05E-03
103	GO:0030433: ubiquitin-dependent ERAD pathway	9.05E-03
104	GO:0001944: vasculature development	9.62E-03
105	GO:0009693: ethylene biosynthetic process	9.62E-03
106	GO:0009411: response to UV	9.62E-03
107	GO:0010584: pollen exine formation	1.02E-02
108	GO:0009790: embryo development	1.03E-02
109	GO:0042631: cellular response to water deprivation	1.14E-02
110	GO:0006662: glycerol ether metabolic process	1.20E-02
111	GO:0009646: response to absence of light	1.26E-02
112	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.36E-02
113	GO:0010193: response to ozone	1.39E-02
114	GO:0000302: response to reactive oxygen species	1.39E-02
115	GO:0006635: fatty acid beta-oxidation	1.39E-02
116	GO:0007264: small GTPase mediated signal transduction	1.46E-02
117	GO:0031047: gene silencing by RNA	1.46E-02
118	GO:0071281: cellular response to iron ion	1.53E-02
119	GO:0010252: auxin homeostasis	1.60E-02
120	GO:0050832: defense response to fungus	1.64E-02
121	GO:0006974: cellular response to DNA damage stimulus	1.96E-02
122	GO:0006950: response to stress	2.03E-02
123	GO:0006970: response to osmotic stress	2.04E-02
124	GO:0006511: ubiquitin-dependent protein catabolic process	2.17E-02
125	GO:0008219: cell death	2.19E-02
126	GO:0009723: response to ethylene	2.19E-02
127	GO:0006499: N-terminal protein myristoylation	2.34E-02
128	GO:0009407: toxin catabolic process	2.34E-02
129	GO:0048527: lateral root development	2.42E-02
130	GO:0010119: regulation of stomatal movement	2.42E-02
131	GO:0016192: vesicle-mediated transport	2.47E-02
132	GO:0006865: amino acid transport	2.51E-02
133	GO:0045087: innate immune response	2.59E-02
134	GO:0016051: carbohydrate biosynthetic process	2.59E-02
135	GO:0034599: cellular response to oxidative stress	2.67E-02
136	GO:0006886: intracellular protein transport	2.90E-02
137	GO:0006631: fatty acid metabolic process	2.93E-02
138	GO:0000209: protein polyubiquitination	3.19E-02
139	GO:0009751: response to salicylic acid	3.41E-02
140	GO:0006855: drug transmembrane transport	3.46E-02
141	GO:0009414: response to water deprivation	3.47E-02
142	GO:0031347: regulation of defense response	3.55E-02
143	GO:0009846: pollen germination	3.65E-02
144	GO:0006486: protein glycosylation	3.83E-02
145	GO:0051603: proteolysis involved in cellular protein catabolic process	3.93E-02
146	GO:0006857: oligopeptide transport	4.02E-02
147	GO:0048316: seed development	4.42E-02
148	GO:0016569: covalent chromatin modification	4.72E-02
149	GO:0009624: response to nematode	4.92E-02

Rank	GO Term	Adjusted P value
1	GO:0016504: peptidase activator activity	0.00E+00
2	GO:0070577: lysine-acetylated histone binding	0.00E+00
3	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
4	GO:0015930: glutamate synthase activity	0.00E+00
5	GO:0004747: ribokinase activity	5.62E-05
6	GO:0008320: protein transmembrane transporter activity	7.52E-05
7	GO:0008865: fructokinase activity	9.72E-05
8	GO:0052747: sinapyl alcohol dehydrogenase activity	9.72E-05
9	GO:0016041: glutamate synthase (ferredoxin) activity	1.42E-04
10	GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity	1.42E-04
11	GO:0004425: indole-3-glycerol-phosphate synthase activity	1.42E-04
12	GO:0004112: cyclic-nucleotide phosphodiesterase activity	1.42E-04
13	GO:0004048: anthranilate phosphoribosyltransferase activity	1.42E-04
14	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	1.42E-04
15	GO:0004788: thiamine diphosphokinase activity	1.42E-04
16	GO:0045551: cinnamyl-alcohol dehydrogenase activity	2.87E-04
17	GO:0004617: phosphoglycerate dehydrogenase activity	3.25E-04
18	GO:0004775: succinate-CoA ligase (ADP-forming) activity	3.25E-04
19	GO:0004061: arylformamidase activity	3.25E-04
20	GO:0004776: succinate-CoA ligase (GDP-forming) activity	3.25E-04
21	GO:0052692: raffinose alpha-galactosidase activity	5.33E-04
22	GO:0080054: low-affinity nitrate transmembrane transporter activity	5.33E-04
23	GO:0008430: selenium binding	5.33E-04
24	GO:0004557: alpha-galactosidase activity	5.33E-04
25	GO:0003840: gamma-glutamyltransferase activity	5.33E-04
26	GO:0036374: glutathione hydrolase activity	5.33E-04
27	GO:0004298: threonine-type endopeptidase activity	6.19E-04
28	GO:0004300: enoyl-CoA hydratase activity	7.63E-04
29	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	7.63E-04
30	GO:0004449: isocitrate dehydrogenase (NAD+) activity	7.63E-04
31	GO:0070628: proteasome binding	1.01E-03
32	GO:0010279: indole-3-acetic acid amido synthetase activity	1.01E-03
33	GO:0004356: glutamate-ammonia ligase activity	1.28E-03
34	GO:0010294: abscisic acid glucosyltransferase activity	1.28E-03
35	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	1.28E-03
36	GO:0005496: steroid binding	1.28E-03
37	GO:0051538: 3 iron, 4 sulfur cluster binding	1.28E-03
38	GO:1990714: hydroxyproline O-galactosyltransferase activity	1.57E-03
39	GO:0036402: proteasome-activating ATPase activity	1.57E-03
40	GO:0016597: amino acid binding	1.65E-03
41	GO:0102391: decanoate--CoA ligase activity	1.88E-03
42	GO:0005509: calcium ion binding	2.14E-03
43	GO:0004467: long-chain fatty acid-CoA ligase activity	2.21E-03
44	GO:0003872: 6-phosphofructokinase activity	2.21E-03
45	GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity	2.56E-03
46	GO:0005544: calcium-dependent phospholipid binding	2.56E-03
47	GO:0071949: FAD binding	3.31E-03
48	GO:0005524: ATP binding	3.33E-03
49	GO:0004364: glutathione transferase activity	3.54E-03
50	GO:0030955: potassium ion binding	3.71E-03
51	GO:0004743: pyruvate kinase activity	3.71E-03
52	GO:0015293: symporter activity	4.13E-03
53	GO:0008378: galactosyltransferase activity	4.99E-03
54	GO:0031624: ubiquitin conjugating enzyme binding	5.92E-03
55	GO:0017025: TBP-class protein binding	6.41E-03
56	GO:0003756: protein disulfide isomerase activity	1.02E-02
57	GO:0047134: protein-disulfide reductase activity	1.08E-02
58	GO:0008080: N-acetyltransferase activity	1.20E-02
59	GO:0001085: RNA polymerase II transcription factor binding	1.20E-02
60	GO:0016887: ATPase activity	1.24E-02
61	GO:0004791: thioredoxin-disulfide reductase activity	1.26E-02
62	GO:0004197: cysteine-type endopeptidase activity	1.46E-02
63	GO:0043565: sequence-specific DNA binding	1.50E-02
64	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.53E-02
65	GO:0042802: identical protein binding	1.55E-02
66	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.96E-02
67	GO:0004683: calmodulin-dependent protein kinase activity	2.03E-02
68	GO:0030247: polysaccharide binding	2.03E-02
69	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.11E-02
70	GO:0015238: drug transmembrane transporter activity	2.26E-02
71	GO:0005507: copper ion binding	2.30E-02
72	GO:0008233: peptidase activity	2.31E-02
73	GO:0004222: metalloendopeptidase activity	2.34E-02
74	GO:0004497: monooxygenase activity	2.35E-02
75	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	2.42E-02
76	GO:0061630: ubiquitin protein ligase activity	2.47E-02
77	GO:0000987: core promoter proximal region sequence-specific DNA binding	2.67E-02
78	GO:0016301: kinase activity	2.77E-02
79	GO:0051287: NAD binding	3.55E-02
80	GO:0005215: transporter activity	4.04E-02
81	GO:0015171: amino acid transmembrane transporter activity	4.12E-02
82	GO:0031625: ubiquitin protein ligase binding	4.12E-02
83	GO:0008234: cysteine-type peptidase activity	4.12E-02
84	GO:0080043: quercetin 3-O-glucosyltransferase activity	4.62E-02
85	GO:0080044: quercetin 7-O-glucosyltransferase activity	4.62E-02

Rank	GO Term	Adjusted P value
1	GO:0000327: lytic vacuole within protein storage vacuole	0.00E+00
2	GO:0005829: cytosol	1.26E-06
3	GO:0005839: proteasome core complex	2.92E-05
4	GO:0005783: endoplasmic reticulum	3.10E-05
5	GO:0005886: plasma membrane	1.14E-04
6	GO:0019773: proteasome core complex, alpha-subunit complex	1.22E-04
7	GO:0030134: ER to Golgi transport vesicle	3.25E-04
8	GO:0005789: endoplasmic reticulum membrane	3.69E-04
9	GO:0046861: glyoxysomal membrane	5.33E-04
10	GO:0016020: membrane	5.83E-04
11	GO:0005741: mitochondrial outer membrane	6.19E-04
12	GO:0000502: proteasome complex	6.20E-04
13	GO:0071782: endoplasmic reticulum tubular network	7.63E-04
14	GO:0005945: 6-phosphofructokinase complex	1.28E-03
15	GO:0008250: oligosaccharyltransferase complex	1.28E-03
16	GO:0031597: cytosolic proteasome complex	1.88E-03
17	GO:0005801: cis-Golgi network	1.88E-03
18	GO:0005773: vacuole	1.92E-03
19	GO:0031595: nuclear proteasome complex	2.21E-03
20	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	2.21E-03
21	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	2.56E-03
22	GO:0000326: protein storage vacuole	2.93E-03
23	GO:0009514: glyoxysome	2.93E-03
24	GO:0005811: lipid particle	2.93E-03
25	GO:0008540: proteasome regulatory particle, base subcomplex	3.71E-03
26	GO:0005777: peroxisome	4.09E-03
27	GO:0005740: mitochondrial envelope	4.12E-03
28	GO:0031012: extracellular matrix	5.45E-03
29	GO:0005764: lysosome	5.92E-03
30	GO:0009536: plastid	1.32E-02
31	GO:0032580: Golgi cisterna membrane	1.60E-02
32	GO:0005778: peroxisomal membrane	1.67E-02
33	GO:0005788: endoplasmic reticulum lumen	1.88E-02
34	GO:0005667: transcription factor complex	1.96E-02
35	GO:0019005: SCF ubiquitin ligase complex	2.19E-02
36	GO:0000151: ubiquitin ligase complex	2.19E-02
37	GO:0009570: chloroplast stroma	2.41E-02
38	GO:0016021: integral component of membrane	2.56E-02
39	GO:0005737: cytoplasm	3.16E-02
40	GO:0005794: Golgi apparatus	3.19E-02
41	GO:0043231: intracellular membrane-bounded organelle	3.81E-02
42	GO:0005635: nuclear envelope	4.02E-02
43	GO:0009505: plant-type cell wall	4.70E-02