co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G11220

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006983: ER overload response	0.00E+00
2	GO:0019483: beta-alanine biosynthetic process	1.05E-07
3	GO:0006212: uracil catabolic process	1.05E-07
4	GO:0006605: protein targeting	1.36E-05
5	GO:0016559: peroxisome fission	1.36E-05
6	GO:0009819: drought recovery	1.36E-05
7	GO:0043562: cellular response to nitrogen levels	1.76E-05
8	GO:0043069: negative regulation of programmed cell death	3.31E-05
9	GO:0006772: thiamine metabolic process	4.04E-05
10	GO:0048508: embryonic meristem development	4.04E-05
11	GO:0006805: xenobiotic metabolic process	4.04E-05
12	GO:0080173: male-female gamete recognition during double fertilization	4.04E-05
13	GO:0031117: positive regulation of microtubule depolymerization	4.04E-05
14	GO:0051603: proteolysis involved in cellular protein catabolic process	6.62E-05
15	GO:0043066: negative regulation of apoptotic process	1.00E-04
16	GO:1902000: homogentisate catabolic process	1.00E-04
17	GO:0040014: regulation of multicellular organism growth	1.00E-04
18	GO:0019441: tryptophan catabolic process to kynurenine	1.00E-04
19	GO:0031648: protein destabilization	1.00E-04
20	GO:0019521: D-gluconate metabolic process	1.00E-04
21	GO:0009945: radial axis specification	1.00E-04
22	GO:0061158: 3'-UTR-mediated mRNA destabilization	1.73E-04
23	GO:0080055: low-affinity nitrate transport	1.73E-04
24	GO:0009072: aromatic amino acid family metabolic process	1.73E-04
25	GO:1900055: regulation of leaf senescence	1.73E-04
26	GO:0006624: vacuolar protein processing	2.55E-04
27	GO:2001289: lipid X metabolic process	2.55E-04
28	GO:0010188: response to microbial phytotoxin	3.43E-04
29	GO:0009229: thiamine diphosphate biosynthetic process	4.37E-04
30	GO:0016094: polyprenol biosynthetic process	4.37E-04
31	GO:0009723: response to ethylene	4.91E-04
32	GO:0006751: glutathione catabolic process	5.37E-04
33	GO:0010358: leaf shaping	5.37E-04
34	GO:0009942: longitudinal axis specification	6.40E-04
35	GO:0050790: regulation of catalytic activity	7.49E-04
36	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	7.49E-04
37	GO:0006955: immune response	7.49E-04
38	GO:0046470: phosphatidylcholine metabolic process	7.49E-04
39	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	7.49E-04
40	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	7.49E-04
41	GO:0001558: regulation of cell growth	9.77E-04
42	GO:0090333: regulation of stomatal closure	1.10E-03
43	GO:0006098: pentose-phosphate shunt	1.10E-03
44	GO:0007346: regulation of mitotic cell cycle	1.22E-03
45	GO:0046686: response to cadmium ion	1.47E-03
46	GO:0000038: very long-chain fatty acid metabolic process	1.49E-03
47	GO:0015706: nitrate transport	1.63E-03
48	GO:0010105: negative regulation of ethylene-activated signaling pathway	1.63E-03
49	GO:0000266: mitochondrial fission	1.63E-03
50	GO:0009738: abscisic acid-activated signaling pathway	1.69E-03
51	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	1.77E-03
52	GO:0009845: seed germination	1.83E-03
53	GO:0048768: root hair cell tip growth	1.92E-03
54	GO:0007031: peroxisome organization	2.07E-03
55	GO:0010150: leaf senescence	2.32E-03
56	GO:2000377: regulation of reactive oxygen species metabolic process	2.39E-03
57	GO:0007005: mitochondrion organization	2.89E-03
58	GO:0031348: negative regulation of defense response	2.89E-03
59	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	3.42E-03
60	GO:0006662: glycerol ether metabolic process	3.80E-03
61	GO:0009860: pollen tube growth	3.84E-03
62	GO:0006508: proteolysis	4.11E-03
63	GO:0009791: post-embryonic development	4.19E-03
64	GO:0006635: fatty acid beta-oxidation	4.38E-03
65	GO:0010200: response to chitin	4.57E-03
66	GO:0009651: response to salt stress	4.70E-03
67	GO:0006914: autophagy	5.00E-03
68	GO:0010252: auxin homeostasis	5.00E-03
69	GO:0045454: cell redox homeostasis	5.28E-03
70	GO:0045892: negative regulation of transcription, DNA-templated	5.36E-03
71	GO:0051607: defense response to virus	5.42E-03
72	GO:0015031: protein transport	5.83E-03
73	GO:0042128: nitrate assimilation	6.09E-03
74	GO:0055114: oxidation-reduction process	6.11E-03
75	GO:0009407: toxin catabolic process	7.25E-03
76	GO:0007568: aging	7.49E-03
77	GO:0048527: lateral root development	7.49E-03
78	GO:0010119: regulation of stomatal movement	7.49E-03
79	GO:0034599: cellular response to oxidative stress	8.24E-03
80	GO:0009873: ethylene-activated signaling pathway	8.40E-03
81	GO:0006631: fatty acid metabolic process	9.01E-03
82	GO:0008283: cell proliferation	9.53E-03
83	GO:0000209: protein polyubiquitination	9.80E-03
84	GO:0009636: response to toxic substance	1.03E-02
85	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	1.09E-02
86	GO:0009846: pollen germination	1.12E-02
87	GO:0009737: response to abscisic acid	1.12E-02
88	GO:0009809: lignin biosynthetic process	1.18E-02
89	GO:0006486: protein glycosylation	1.18E-02
90	GO:0006857: oligopeptide transport	1.23E-02
91	GO:0050832: defense response to fungus	1.71E-02
92	GO:0009790: embryo development	1.97E-02
93	GO:0009414: response to water deprivation	2.29E-02
94	GO:0006979: response to oxidative stress	2.37E-02
95	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.41E-02
96	GO:0006470: protein dephosphorylation	2.45E-02
97	GO:0009409: response to cold	3.18E-02
98	GO:0006970: response to osmotic stress	3.20E-02
99	GO:0007049: cell cycle	3.28E-02
100	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.63E-02
101	GO:0046777: protein autophosphorylation	3.71E-02
102	GO:0016042: lipid catabolic process	4.57E-02
103	GO:0009751: response to salicylic acid	4.62E-02
104	GO:0009408: response to heat	4.67E-02
105	GO:0048364: root development	4.81E-02
106	GO:0009753: response to jasmonic acid	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0004157: dihydropyrimidinase activity	0.00E+00
2	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
3	GO:0017113: dihydropyrimidine dehydrogenase (NADP+) activity	0.00E+00
4	GO:0004197: cysteine-type endopeptidase activity	6.85E-06
5	GO:0004788: thiamine diphosphokinase activity	4.04E-05
6	GO:0019707: protein-cysteine S-acyltransferase activity	4.04E-05
7	GO:0019786: Atg8-specific protease activity	4.04E-05
8	GO:0004061: arylformamidase activity	1.00E-04
9	GO:0019779: Atg8 activating enzyme activity	1.00E-04
10	GO:0003840: gamma-glutamyltransferase activity	1.73E-04
11	GO:0036374: glutathione hydrolase activity	1.73E-04
12	GO:0080054: low-affinity nitrate transmembrane transporter activity	1.73E-04
13	GO:0005047: signal recognition particle binding	1.73E-04
14	GO:0004300: enoyl-CoA hydratase activity	2.55E-04
15	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	2.55E-04
16	GO:0019776: Atg8 ligase activity	3.43E-04
17	GO:0002094: polyprenyltransferase activity	4.37E-04
18	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	4.37E-04
19	GO:0008420: CTD phosphatase activity	5.37E-04
20	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	6.40E-04
21	GO:0004364: glutathione transferase activity	7.07E-04
22	GO:0004620: phospholipase activity	7.49E-04
23	GO:0052747: sinapyl alcohol dehydrogenase activity	8.61E-04
24	GO:0004630: phospholipase D activity	9.77E-04
25	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	9.77E-04
26	GO:0008234: cysteine-type peptidase activity	1.07E-03
27	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	1.10E-03
28	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.63E-03
29	GO:0008131: primary amine oxidase activity	1.92E-03
30	GO:0031624: ubiquitin conjugating enzyme binding	1.92E-03
31	GO:0004175: endopeptidase activity	1.92E-03
32	GO:0019706: protein-cysteine S-palmitoyltransferase activity	2.72E-03
33	GO:0042802: identical protein binding	2.94E-03
34	GO:0003727: single-stranded RNA binding	3.24E-03
35	GO:0047134: protein-disulfide reductase activity	3.42E-03
36	GO:0004791: thioredoxin-disulfide reductase activity	3.99E-03
37	GO:0048038: quinone binding	4.38E-03
38	GO:0061630: ubiquitin protein ligase activity	4.64E-03
39	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	4.79E-03
40	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	5.21E-03
41	GO:0003924: GTPase activity	6.50E-03
42	GO:0005096: GTPase activator activity	7.01E-03
43	GO:0005515: protein binding	7.23E-03
44	GO:0016887: ATPase activity	1.01E-02
45	GO:0015293: symporter activity	1.03E-02
46	GO:0005198: structural molecule activity	1.03E-02
47	GO:0015035: protein disulfide oxidoreductase activity	1.54E-02
48	GO:0005525: GTP binding	1.91E-02
49	GO:0005509: calcium ion binding	2.16E-02
50	GO:0008017: microtubule binding	2.30E-02
51	GO:0004601: peroxidase activity	3.04E-02
52	GO:0016491: oxidoreductase activity	3.09E-02
53	GO:0008270: zinc ion binding	3.48E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0005785: signal recognition particle receptor complex	0.00E+00
3	GO:0005773: vacuole	1.65E-05
4	GO:0005829: cytosol	3.10E-05
5	GO:0005777: peroxisome	3.21E-05
6	GO:0005783: endoplasmic reticulum	4.04E-05
7	GO:0000138: Golgi trans cisterna	4.04E-05
8	GO:0005764: lysosome	6.26E-05
9	GO:0005769: early endosome	8.11E-05
10	GO:0030139: endocytic vesicle	1.73E-04
11	GO:0005775: vacuolar lumen	2.55E-04
12	GO:0032585: multivesicular body membrane	2.55E-04
13	GO:0000323: lytic vacuole	2.55E-04
14	GO:0005778: peroxisomal membrane	3.14E-04
15	GO:0005776: autophagosome	3.43E-04
16	GO:0000421: autophagosome membrane	8.61E-04
17	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	9.77E-04
18	GO:0005779: integral component of peroxisomal membrane	9.77E-04
19	GO:0005635: nuclear envelope	1.04E-03
20	GO:0031901: early endosome membrane	1.10E-03
21	GO:0016604: nuclear body	1.22E-03
22	GO:0005623: cell	1.74E-03
23	GO:0005794: Golgi apparatus	1.91E-03
24	GO:0005615: extracellular space	2.60E-03
25	GO:0005741: mitochondrial outer membrane	2.72E-03
26	GO:0031410: cytoplasmic vesicle	2.89E-03
27	GO:0030136: clathrin-coated vesicle	3.42E-03
28	GO:0000151: ubiquitin ligase complex	6.77E-03
29	GO:0005819: spindle	8.49E-03
30	GO:0005886: plasma membrane	8.50E-03
31	GO:0090406: pollen tube	9.53E-03
32	GO:0031966: mitochondrial membrane	1.12E-02
33	GO:0009506: plasmodesma	1.16E-02
34	GO:0012505: endomembrane system	1.48E-02
35	GO:0009524: phragmoplast	1.84E-02
36	GO:0005802: trans-Golgi network	1.86E-02
37	GO:0005737: cytoplasm	1.90E-02
38	GO:0005768: endosome	2.11E-02
39	GO:0048046: apoplast	2.21E-02
40	GO:0005874: microtubule	3.45E-02
41	GO:0005789: endoplasmic reticulum membrane	3.58E-02
42	GO:0009570: chloroplast stroma	4.59E-02