co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G10960

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010360: negative regulation of anion channel activity	0.00E+00
2	GO:2000541: positive regulation of protein geranylgeranylation	0.00E+00
3	GO:0032780: negative regulation of ATPase activity	0.00E+00
4	GO:1901017: negative regulation of potassium ion transmembrane transporter activity	0.00E+00
5	GO:0018344: protein geranylgeranylation	3.81E-05
6	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	5.65E-05
7	GO:0006511: ubiquitin-dependent protein catabolic process	1.00E-04
8	GO:1901183: positive regulation of camalexin biosynthetic process	1.75E-04
9	GO:0048455: stamen formation	1.75E-04
10	GO:1990641: response to iron ion starvation	1.75E-04
11	GO:0080173: male-female gamete recognition during double fertilization	1.75E-04
12	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	1.75E-04
13	GO:0010421: hydrogen peroxide-mediated programmed cell death	1.75E-04
14	GO:1902361: mitochondrial pyruvate transmembrane transport	1.75E-04
15	GO:0009688: abscisic acid biosynthetic process	2.90E-04
16	GO:0007051: spindle organization	3.96E-04
17	GO:0006101: citrate metabolic process	3.96E-04
18	GO:0006850: mitochondrial pyruvate transport	3.96E-04
19	GO:1902000: homogentisate catabolic process	3.96E-04
20	GO:0019441: tryptophan catabolic process to kynurenine	3.96E-04
21	GO:0097054: L-glutamate biosynthetic process	3.96E-04
22	GO:0006597: spermine biosynthetic process	3.96E-04
23	GO:0031648: protein destabilization	3.96E-04
24	GO:0019521: D-gluconate metabolic process	3.96E-04
25	GO:0019374: galactolipid metabolic process	3.96E-04
26	GO:0051788: response to misfolded protein	3.96E-04
27	GO:0006099: tricarboxylic acid cycle	4.75E-04
28	GO:0009072: aromatic amino acid family metabolic process	6.47E-04
29	GO:0010498: proteasomal protein catabolic process	6.47E-04
30	GO:0046686: response to cadmium ion	7.64E-04
31	GO:0030433: ubiquitin-dependent ERAD pathway	8.98E-04
32	GO:0009809: lignin biosynthetic process	8.98E-04
33	GO:0010255: glucose mediated signaling pathway	9.23E-04
34	GO:0001676: long-chain fatty acid metabolic process	9.23E-04
35	GO:0072334: UDP-galactose transmembrane transport	9.23E-04
36	GO:0006537: glutamate biosynthetic process	9.23E-04
37	GO:0006979: response to oxidative stress	1.13E-03
38	GO:0019676: ammonia assimilation cycle	1.22E-03
39	GO:0046345: abscisic acid catabolic process	1.22E-03
40	GO:0048638: regulation of developmental growth	1.22E-03
41	GO:0010363: regulation of plant-type hypersensitive response	1.22E-03
42	GO:0033356: UDP-L-arabinose metabolic process	1.22E-03
43	GO:0009651: response to salt stress	1.33E-03
44	GO:0006097: glyoxylate cycle	1.56E-03
45	GO:0010225: response to UV-C	1.56E-03
46	GO:0006405: RNA export from nucleus	1.56E-03
47	GO:0035435: phosphate ion transmembrane transport	1.91E-03
48	GO:0000060: protein import into nucleus, translocation	1.91E-03
49	GO:0006796: phosphate-containing compound metabolic process	1.91E-03
50	GO:0006596: polyamine biosynthetic process	1.91E-03
51	GO:0009117: nucleotide metabolic process	1.91E-03
52	GO:0006014: D-ribose metabolic process	1.91E-03
53	GO:0006121: mitochondrial electron transport, succinate to ubiquinone	1.91E-03
54	GO:0010405: arabinogalactan protein metabolic process	1.91E-03
55	GO:0043248: proteasome assembly	1.91E-03
56	GO:0042176: regulation of protein catabolic process	1.91E-03
57	GO:0018258: protein O-linked glycosylation via hydroxyproline	1.91E-03
58	GO:0010252: auxin homeostasis	1.96E-03
59	GO:0009408: response to heat	2.19E-03
60	GO:0009615: response to virus	2.34E-03
61	GO:0000082: G1/S transition of mitotic cell cycle	2.70E-03
62	GO:0048528: post-embryonic root development	2.70E-03
63	GO:1900056: negative regulation of leaf senescence	2.70E-03
64	GO:0019745: pentacyclic triterpenoid biosynthetic process	2.70E-03
65	GO:2000070: regulation of response to water deprivation	3.13E-03
66	GO:0006102: isocitrate metabolic process	3.13E-03
67	GO:0006644: phospholipid metabolic process	3.13E-03
68	GO:0009061: anaerobic respiration	3.13E-03
69	GO:0009407: toxin catabolic process	3.35E-03
70	GO:0010043: response to zinc ion	3.51E-03
71	GO:0010120: camalexin biosynthetic process	3.58E-03
72	GO:0009657: plastid organization	3.58E-03
73	GO:0006098: pentose-phosphate shunt	4.05E-03
74	GO:0030042: actin filament depolymerization	4.54E-03
75	GO:0048354: mucilage biosynthetic process involved in seed coat development	4.54E-03
76	GO:0042542: response to hydrogen peroxide	4.75E-03
77	GO:0051707: response to other organism	4.95E-03
78	GO:0007064: mitotic sister chromatid cohesion	5.05E-03
79	GO:0043069: negative regulation of programmed cell death	5.05E-03
80	GO:0010162: seed dormancy process	5.05E-03
81	GO:0009644: response to high light intensity	5.35E-03
82	GO:0048229: gametophyte development	5.58E-03
83	GO:0015770: sucrose transport	5.58E-03
84	GO:0006855: drug transmembrane transport	5.77E-03
85	GO:0055114: oxidation-reduction process	5.88E-03
86	GO:0012501: programmed cell death	6.13E-03
87	GO:0009266: response to temperature stimulus	7.28E-03
88	GO:0055085: transmembrane transport	7.51E-03
89	GO:0070588: calcium ion transmembrane transport	7.89E-03
90	GO:0006071: glycerol metabolic process	8.51E-03
91	GO:0016042: lipid catabolic process	1.00E-02
92	GO:0006629: lipid metabolic process	1.04E-02
93	GO:0016998: cell wall macromolecule catabolic process	1.05E-02
94	GO:0031348: negative regulation of defense response	1.12E-02
95	GO:0035428: hexose transmembrane transport	1.12E-02
96	GO:0016117: carotenoid biosynthetic process	1.33E-02
97	GO:0051028: mRNA transport	1.33E-02
98	GO:0010118: stomatal movement	1.41E-02
99	GO:0046323: glucose import	1.49E-02
100	GO:0019252: starch biosynthetic process	1.64E-02
101	GO:0009851: auxin biosynthetic process	1.64E-02
102	GO:0010193: response to ozone	1.72E-02
103	GO:0007264: small GTPase mediated signal transduction	1.81E-02
104	GO:0030163: protein catabolic process	1.89E-02
105	GO:0010468: regulation of gene expression	1.97E-02
106	GO:0006464: cellular protein modification process	1.98E-02
107	GO:0016310: phosphorylation	1.98E-02
108	GO:0009555: pollen development	2.15E-02
109	GO:0009607: response to biotic stimulus	2.33E-02
110	GO:0010029: regulation of seed germination	2.33E-02
111	GO:0009816: defense response to bacterium, incompatible interaction	2.33E-02
112	GO:0006974: cellular response to DNA damage stimulus	2.42E-02
113	GO:0030244: cellulose biosynthetic process	2.71E-02
114	GO:0008219: cell death	2.71E-02
115	GO:0009832: plant-type cell wall biogenesis	2.80E-02
116	GO:0048767: root hair elongation	2.80E-02
117	GO:0006839: mitochondrial transport	3.52E-02
118	GO:0006631: fatty acid metabolic process	3.62E-02
119	GO:0045892: negative regulation of transcription, DNA-templated	3.84E-02
120	GO:0009744: response to sucrose	3.84E-02
121	GO:0008643: carbohydrate transport	4.06E-02
122	GO:0009636: response to toxic substance	4.17E-02
123	GO:0032259: methylation	4.46E-02
124	GO:0009664: plant-type cell wall organization	4.51E-02
125	GO:0009846: pollen germination	4.51E-02
126	GO:0009737: response to abscisic acid	4.61E-02
127	GO:0006486: protein glycosylation	4.74E-02
128	GO:0051603: proteolysis involved in cellular protein catabolic process	4.86E-02
129	GO:0009414: response to water deprivation	5.00E-02

Rank	GO Term	Adjusted P value
1	GO:0005092: GDP-dissociation inhibitor activity	0.00E+00
2	GO:0003846: 2-acylglycerol O-acyltransferase activity	0.00E+00
3	GO:0015930: glutamate synthase activity	0.00E+00
4	GO:0042030: ATPase inhibitor activity	0.00E+00
5	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
6	GO:0004622: lysophospholipase activity	0.00E+00
7	GO:0010279: indole-3-acetic acid amido synthetase activity	2.35E-05
8	GO:0036402: proteasome-activating ATPase activity	5.65E-05
9	GO:0005524: ATP binding	5.86E-05
10	GO:0016768: spermine synthase activity	1.75E-04
11	GO:0016041: glutamate synthase (ferredoxin) activity	1.75E-04
12	GO:0090430: caffeoyl-CoA: alcohol caffeoyl transferase activity	1.75E-04
13	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	1.75E-04
14	GO:0008171: O-methyltransferase activity	2.90E-04
15	GO:0004061: arylformamidase activity	3.96E-04
16	GO:0015036: disulfide oxidoreductase activity	3.96E-04
17	GO:0004385: guanylate kinase activity	3.96E-04
18	GO:0008517: folic acid transporter activity	3.96E-04
19	GO:0004776: succinate-CoA ligase (GDP-forming) activity	3.96E-04
20	GO:0003994: aconitate hydratase activity	3.96E-04
21	GO:0004766: spermidine synthase activity	3.96E-04
22	GO:0004775: succinate-CoA ligase (ADP-forming) activity	3.96E-04
23	GO:0017025: TBP-class protein binding	5.54E-04
24	GO:0004663: Rab geranylgeranyltransferase activity	6.47E-04
25	GO:0005093: Rab GDP-dissociation inhibitor activity	6.47E-04
26	GO:0050833: pyruvate transmembrane transporter activity	6.47E-04
27	GO:0004298: threonine-type endopeptidase activity	8.23E-04
28	GO:0042299: lupeol synthase activity	9.23E-04
29	GO:0008276: protein methyltransferase activity	9.23E-04
30	GO:0001653: peptide receptor activity	9.23E-04
31	GO:0016866: intramolecular transferase activity	1.22E-03
32	GO:0004031: aldehyde oxidase activity	1.22E-03
33	GO:0050302: indole-3-acetaldehyde oxidase activity	1.22E-03
34	GO:0009916: alternative oxidase activity	1.22E-03
35	GO:0004737: pyruvate decarboxylase activity	1.22E-03
36	GO:0000104: succinate dehydrogenase activity	1.56E-03
37	GO:0008177: succinate dehydrogenase (ubiquinone) activity	1.56E-03
38	GO:0051538: 3 iron, 4 sulfur cluster binding	1.56E-03
39	GO:0045549: 9-cis-epoxycarotenoid dioxygenase activity	1.56E-03
40	GO:0010294: abscisic acid glucosyltransferase activity	1.56E-03
41	GO:0005459: UDP-galactose transmembrane transporter activity	1.56E-03
42	GO:0015145: monosaccharide transmembrane transporter activity	1.56E-03
43	GO:0017137: Rab GTPase binding	1.56E-03
44	GO:0047714: galactolipase activity	1.91E-03
45	GO:0016462: pyrophosphatase activity	1.91E-03
46	GO:0030976: thiamine pyrophosphate binding	1.91E-03
47	GO:1990714: hydroxyproline O-galactosyltransferase activity	1.91E-03
48	GO:0031593: polyubiquitin binding	1.91E-03
49	GO:0016301: kinase activity	2.05E-03
50	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	2.30E-03
51	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	2.30E-03
52	GO:0102391: decanoate--CoA ligase activity	2.30E-03
53	GO:0004747: ribokinase activity	2.30E-03
54	GO:0004620: phospholipase activity	2.70E-03
55	GO:0004467: long-chain fatty acid-CoA ligase activity	2.70E-03
56	GO:0016831: carboxy-lyase activity	2.70E-03
57	GO:0008506: sucrose:proton symporter activity	2.70E-03
58	GO:0004427: inorganic diphosphatase activity	2.70E-03
59	GO:0008865: fructokinase activity	3.13E-03
60	GO:0052747: sinapyl alcohol dehydrogenase activity	3.13E-03
61	GO:0005096: GTPase activator activity	3.19E-03
62	GO:0008194: UDP-glycosyltransferase activity	3.20E-03
63	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	3.58E-03
64	GO:0005509: calcium ion binding	3.64E-03
65	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	3.76E-03
66	GO:0008889: glycerophosphodiester phosphodiesterase activity	4.05E-03
67	GO:0016887: ATPase activity	4.26E-03
68	GO:0045309: protein phosphorylated amino acid binding	4.54E-03
69	GO:0047617: acyl-CoA hydrolase activity	4.54E-03
70	GO:0004364: glutathione transferase activity	4.75E-03
71	GO:0030234: enzyme regulator activity	5.05E-03
72	GO:0019904: protein domain specific binding	5.58E-03
73	GO:0008559: xenobiotic-transporting ATPase activity	5.58E-03
74	GO:0004129: cytochrome-c oxidase activity	5.58E-03
75	GO:0008794: arsenate reductase (glutaredoxin) activity	5.58E-03
76	GO:0045551: cinnamyl-alcohol dehydrogenase activity	6.13E-03
77	GO:0008378: galactosyltransferase activity	6.13E-03
78	GO:0005315: inorganic phosphate transmembrane transporter activity	6.70E-03
79	GO:0015114: phosphate ion transmembrane transporter activity	6.70E-03
80	GO:0005388: calcium-transporting ATPase activity	6.70E-03
81	GO:0080043: quercetin 3-O-glucosyltransferase activity	8.66E-03
82	GO:0080044: quercetin 7-O-glucosyltransferase activity	8.66E-03
83	GO:0005516: calmodulin binding	9.72E-03
84	GO:0043424: protein histidine kinase binding	9.80E-03
85	GO:0009055: electron carrier activity	1.14E-02
86	GO:0016758: transferase activity, transferring hexosyl groups	1.16E-02
87	GO:0022891: substrate-specific transmembrane transporter activity	1.19E-02
88	GO:0005199: structural constituent of cell wall	1.49E-02
89	GO:0008536: Ran GTPase binding	1.49E-02
90	GO:0005355: glucose transmembrane transporter activity	1.56E-02
91	GO:0005215: transporter activity	1.77E-02
92	GO:0004197: cysteine-type endopeptidase activity	1.81E-02
93	GO:0016491: oxidoreductase activity	2.29E-02
94	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.42E-02
95	GO:0000287: magnesium ion binding	2.50E-02
96	GO:0004683: calmodulin-dependent protein kinase activity	2.52E-02
97	GO:0004806: triglyceride lipase activity	2.52E-02
98	GO:0015238: drug transmembrane transporter activity	2.80E-02
99	GO:0004222: metalloendopeptidase activity	2.90E-02
100	GO:0050660: flavin adenine dinucleotide binding	2.95E-02
101	GO:0050897: cobalt ion binding	3.00E-02
102	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	3.00E-02
103	GO:0008233: peptidase activity	3.11E-02
104	GO:0016757: transferase activity, transferring glycosyl groups	3.42E-02
105	GO:0051539: 4 iron, 4 sulfur cluster binding	3.52E-02
106	GO:0051537: 2 iron, 2 sulfur cluster binding	4.06E-02
107	GO:0003924: GTPase activity	4.65E-02
108	GO:0016787: hydrolase activity	4.65E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0046862: chromoplast membrane	0.00E+00
3	GO:0000502: proteasome complex	2.54E-07
4	GO:0005829: cytosol	1.25E-06
5	GO:0008540: proteasome regulatory particle, base subcomplex	5.85E-06
6	GO:0005968: Rab-protein geranylgeranyltransferase complex	1.27E-05
7	GO:0005886: plasma membrane	5.53E-05
8	GO:0031597: cytosolic proteasome complex	7.89E-05
9	GO:0031595: nuclear proteasome complex	1.05E-04
10	GO:0031314: extrinsic component of mitochondrial inner membrane	3.96E-04
11	GO:0009530: primary cell wall	6.47E-04
12	GO:0005751: mitochondrial respiratory chain complex IV	6.47E-04
13	GO:0046861: glyoxysomal membrane	6.47E-04
14	GO:0005839: proteasome core complex	8.23E-04
15	GO:0005794: Golgi apparatus	1.04E-03
16	GO:0030173: integral component of Golgi membrane	2.30E-03
17	GO:0031305: integral component of mitochondrial inner membrane	3.13E-03
18	GO:0045273: respiratory chain complex II	3.13E-03
19	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	3.13E-03
20	GO:0009514: glyoxysome	3.58E-03
21	GO:0019773: proteasome core complex, alpha-subunit complex	3.58E-03
22	GO:0008541: proteasome regulatory particle, lid subcomplex	5.58E-03
23	GO:0005618: cell wall	5.83E-03
24	GO:0005777: peroxisome	6.45E-03
25	GO:0016602: CCAAT-binding factor complex	6.70E-03
26	GO:0005635: nuclear envelope	7.14E-03
27	GO:0030176: integral component of endoplasmic reticulum membrane	7.89E-03
28	GO:0070469: respiratory chain	9.80E-03
29	GO:0015629: actin cytoskeleton	1.19E-02
30	GO:0009506: plasmodesma	1.41E-02
31	GO:0005778: peroxisomal membrane	2.06E-02
32	GO:0005643: nuclear pore	2.71E-02
33	GO:0005773: vacuole	2.85E-02
34	GO:0000325: plant-type vacuole	3.00E-02
35	GO:0016020: membrane	3.17E-02
36	GO:0005819: spindle	3.41E-02
37	GO:0005774: vacuolar membrane	3.53E-02
38	GO:0005743: mitochondrial inner membrane	4.33E-02