co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G10050

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043462: regulation of ATPase activity	0.00E+00
2	GO:0032780: negative regulation of ATPase activity	0.00E+00
3	GO:0046292: formaldehyde metabolic process	0.00E+00
4	GO:0048227: plasma membrane to endosome transport	0.00E+00
5	GO:0006069: ethanol oxidation	0.00E+00
6	GO:0001881: receptor recycling	0.00E+00
7	GO:0098710: guanine import across plasma membrane	1.10E-04
8	GO:0006805: xenobiotic metabolic process	1.10E-04
9	GO:0000303: response to superoxide	1.10E-04
10	GO:0080173: male-female gamete recognition during double fertilization	1.10E-04
11	GO:0035344: hypoxanthine transport	1.10E-04
12	GO:0098721: uracil import across plasma membrane	1.10E-04
13	GO:0098702: adenine import across plasma membrane	1.10E-04
14	GO:0048455: stamen formation	1.10E-04
15	GO:0006511: ubiquitin-dependent protein catabolic process	1.21E-04
16	GO:0055114: oxidation-reduction process	2.44E-04
17	GO:1905182: positive regulation of urease activity	2.57E-04
18	GO:0019521: D-gluconate metabolic process	2.57E-04
19	GO:0019374: galactolipid metabolic process	2.57E-04
20	GO:0051788: response to misfolded protein	2.57E-04
21	GO:0007051: spindle organization	2.57E-04
22	GO:1902000: homogentisate catabolic process	2.57E-04
23	GO:0097054: L-glutamate biosynthetic process	2.57E-04
24	GO:0006597: spermine biosynthetic process	2.57E-04
25	GO:0007034: vacuolar transport	2.61E-04
26	GO:2000377: regulation of reactive oxygen species metabolic process	3.65E-04
27	GO:0009809: lignin biosynthetic process	4.00E-04
28	GO:0051603: proteolysis involved in cellular protein catabolic process	4.18E-04
29	GO:0009072: aromatic amino acid family metabolic process	4.25E-04
30	GO:0008333: endosome to lysosome transport	4.25E-04
31	GO:1900055: regulation of leaf senescence	4.25E-04
32	GO:0048586: regulation of long-day photoperiodism, flowering	4.25E-04
33	GO:0010359: regulation of anion channel activity	4.25E-04
34	GO:0043617: cellular response to sucrose starvation	4.25E-04
35	GO:0006809: nitric oxide biosynthetic process	6.10E-04
36	GO:0006537: glutamate biosynthetic process	6.10E-04
37	GO:0006624: vacuolar protein processing	6.10E-04
38	GO:0042147: retrograde transport, endosome to Golgi	6.19E-04
39	GO:0019676: ammonia assimilation cycle	8.10E-04
40	GO:0010363: regulation of plant-type hypersensitive response	8.10E-04
41	GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA	8.10E-04
42	GO:0006542: glutamine biosynthetic process	8.10E-04
43	GO:0006623: protein targeting to vacuole	8.23E-04
44	GO:0006405: RNA export from nucleus	1.02E-03
45	GO:0046283: anthocyanin-containing compound metabolic process	1.02E-03
46	GO:0006464: cellular protein modification process	1.05E-03
47	GO:0010150: leaf senescence	1.23E-03
48	GO:0006751: glutathione catabolic process	1.25E-03
49	GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation	1.25E-03
50	GO:0043248: proteasome assembly	1.25E-03
51	GO:1902456: regulation of stomatal opening	1.25E-03
52	GO:0035435: phosphate ion transmembrane transport	1.25E-03
53	GO:0000060: protein import into nucleus, translocation	1.25E-03
54	GO:0006596: polyamine biosynthetic process	1.25E-03
55	GO:0048280: vesicle fusion with Golgi apparatus	1.49E-03
56	GO:0010189: vitamin E biosynthetic process	1.49E-03
57	GO:0006401: RNA catabolic process	1.75E-03
58	GO:0006955: immune response	1.75E-03
59	GO:0048528: post-embryonic root development	1.75E-03
60	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	1.75E-03
61	GO:0000082: G1/S transition of mitotic cell cycle	1.75E-03
62	GO:0010043: response to zinc ion	1.86E-03
63	GO:0006644: phospholipid metabolic process	2.03E-03
64	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	2.03E-03
65	GO:0009657: plastid organization	2.32E-03
66	GO:0009744: response to sucrose	2.61E-03
67	GO:0006098: pentose-phosphate shunt	2.62E-03
68	GO:0090305: nucleic acid phosphodiester bond hydrolysis	2.62E-03
69	GO:0000373: Group II intron splicing	2.62E-03
70	GO:0006508: proteolysis	2.80E-03
71	GO:0046686: response to cadmium ion	2.90E-03
72	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	2.93E-03
73	GO:0016571: histone methylation	2.93E-03
74	GO:0006896: Golgi to vacuole transport	3.25E-03
75	GO:0009651: response to salt stress	3.33E-03
76	GO:0043085: positive regulation of catalytic activity	3.59E-03
77	GO:0012501: programmed cell death	3.93E-03
78	GO:0010102: lateral root morphogenesis	4.30E-03
79	GO:0006807: nitrogen compound metabolic process	4.30E-03
80	GO:0009408: response to heat	4.57E-03
81	GO:0009266: response to temperature stimulus	4.66E-03
82	GO:0034976: response to endoplasmic reticulum stress	5.44E-03
83	GO:0006979: response to oxidative stress	5.76E-03
84	GO:0006289: nucleotide-excision repair	5.84E-03
85	GO:0016226: iron-sulfur cluster assembly	7.11E-03
86	GO:0016117: carotenoid biosynthetic process	8.46E-03
87	GO:0051028: mRNA transport	8.46E-03
88	GO:0034220: ion transmembrane transport	8.93E-03
89	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	9.62E-03
90	GO:0009646: response to absence of light	9.91E-03
91	GO:0010468: regulation of gene expression	1.03E-02
92	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.09E-02
93	GO:0071554: cell wall organization or biogenesis	1.09E-02
94	GO:0010193: response to ozone	1.09E-02
95	GO:0006891: intra-Golgi vesicle-mediated transport	1.09E-02
96	GO:0006635: fatty acid beta-oxidation	1.09E-02
97	GO:0009630: gravitropism	1.14E-02
98	GO:0007264: small GTPase mediated signal transduction	1.14E-02
99	GO:0010583: response to cyclopentenone	1.14E-02
100	GO:0016032: viral process	1.14E-02
101	GO:1901657: glycosyl compound metabolic process	1.20E-02
102	GO:0030163: protein catabolic process	1.20E-02
103	GO:0010286: heat acclimation	1.30E-02
104	GO:0009658: chloroplast organization	1.33E-02
105	GO:0009911: positive regulation of flower development	1.42E-02
106	GO:0010029: regulation of seed germination	1.47E-02
107	GO:0009816: defense response to bacterium, incompatible interaction	1.47E-02
108	GO:0042128: nitrate assimilation	1.53E-02
109	GO:0006974: cellular response to DNA damage stimulus	1.53E-02
110	GO:0009723: response to ethylene	1.54E-02
111	GO:0006888: ER to Golgi vesicle-mediated transport	1.59E-02
112	GO:0048573: photoperiodism, flowering	1.59E-02
113	GO:0006950: response to stress	1.59E-02
114	GO:0008219: cell death	1.71E-02
115	GO:0048767: root hair elongation	1.77E-02
116	GO:0009737: response to abscisic acid	1.78E-02
117	GO:0009407: toxin catabolic process	1.83E-02
118	GO:0007568: aging	1.89E-02
119	GO:0010119: regulation of stomatal movement	1.89E-02
120	GO:0045454: cell redox homeostasis	1.98E-02
121	GO:0009853: photorespiration	2.02E-02
122	GO:0009867: jasmonic acid mediated signaling pathway	2.02E-02
123	GO:0042542: response to hydrogen peroxide	2.35E-02
124	GO:0016042: lipid catabolic process	2.38E-02
125	GO:0051707: response to other organism	2.42E-02
126	GO:0006629: lipid metabolic process	2.45E-02
127	GO:0009644: response to high light intensity	2.56E-02
128	GO:0009636: response to toxic substance	2.63E-02
129	GO:0042538: hyperosmotic salinity response	2.85E-02
130	GO:0009664: plant-type cell wall organization	2.85E-02
131	GO:0048316: seed development	3.45E-02
132	GO:0009626: plant-type hypersensitive response	3.53E-02
133	GO:0018105: peptidyl-serine phosphorylation	3.93E-02
134	GO:0000398: mRNA splicing, via spliceosome	4.26E-02

Rank	GO Term	Adjusted P value
1	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
2	GO:0080007: S-nitrosoglutathione reductase activity	0.00E+00
3	GO:0050342: tocopherol O-methyltransferase activity	0.00E+00
4	GO:0004622: lysophospholipase activity	0.00E+00
5	GO:0051903: S-(hydroxymethyl)glutathione dehydrogenase activity	0.00E+00
6	GO:0015930: glutamate synthase activity	0.00E+00
7	GO:0003846: 2-acylglycerol O-acyltransferase activity	0.00E+00
8	GO:0016508: long-chain-enoyl-CoA hydratase activity	0.00E+00
9	GO:0042030: ATPase inhibitor activity	0.00E+00
10	GO:0031593: polyubiquitin binding	2.64E-05
11	GO:0090430: caffeoyl-CoA: alcohol caffeoyl transferase activity	1.10E-04
12	GO:0008692: 3-hydroxybutyryl-CoA epimerase activity	1.10E-04
13	GO:0015208: guanine transmembrane transporter activity	1.10E-04
14	GO:0004112: cyclic-nucleotide phosphodiesterase activity	1.10E-04
15	GO:0015294: solute:cation symporter activity	1.10E-04
16	GO:0015207: adenine transmembrane transporter activity	1.10E-04
17	GO:0019707: protein-cysteine S-acyltransferase activity	1.10E-04
18	GO:0016768: spermine synthase activity	1.10E-04
19	GO:0016041: glutamate synthase (ferredoxin) activity	1.10E-04
20	GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity	1.10E-04
21	GO:0004766: spermidine synthase activity	2.57E-04
22	GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity	2.57E-04
23	GO:0004839: ubiquitin activating enzyme activity	2.57E-04
24	GO:0019172: glyoxalase III activity	2.57E-04
25	GO:0015036: disulfide oxidoreductase activity	2.57E-04
26	GO:0005093: Rab GDP-dissociation inhibitor activity	4.25E-04
27	GO:0003863: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity	4.25E-04
28	GO:0016151: nickel cation binding	4.25E-04
29	GO:0003840: gamma-glutamyltransferase activity	4.25E-04
30	GO:0036374: glutathione hydrolase activity	4.25E-04
31	GO:0016805: dipeptidase activity	4.25E-04
32	GO:0001653: peptide receptor activity	6.10E-04
33	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	6.10E-04
34	GO:0004165: dodecenoyl-CoA delta-isomerase activity	6.10E-04
35	GO:0004300: enoyl-CoA hydratase activity	6.10E-04
36	GO:0015210: uracil transmembrane transporter activity	8.10E-04
37	GO:0070628: proteasome binding	8.10E-04
38	GO:0009916: alternative oxidase activity	8.10E-04
39	GO:0004301: epoxide hydrolase activity	8.10E-04
40	GO:0004197: cysteine-type endopeptidase activity	9.34E-04
41	GO:0008641: small protein activating enzyme activity	1.02E-03
42	GO:0031386: protein tag	1.02E-03
43	GO:0051538: 3 iron, 4 sulfur cluster binding	1.02E-03
44	GO:0004356: glutamate-ammonia ligase activity	1.02E-03
45	GO:0047714: galactolipase activity	1.25E-03
46	GO:0003950: NAD+ ADP-ribosyltransferase activity	1.49E-03
47	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	1.49E-03
48	GO:0004656: procollagen-proline 4-dioxygenase activity	1.49E-03
49	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	1.49E-03
50	GO:0005096: GTPase activator activity	1.69E-03
51	GO:0008235: metalloexopeptidase activity	1.75E-03
52	GO:0008121: ubiquinol-cytochrome-c reductase activity	1.75E-03
53	GO:0016621: cinnamoyl-CoA reductase activity	1.75E-03
54	GO:0004620: phospholipase activity	1.75E-03
55	GO:0052747: sinapyl alcohol dehydrogenase activity	2.03E-03
56	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	2.32E-03
57	GO:0045309: protein phosphorylated amino acid binding	2.93E-03
58	GO:0047617: acyl-CoA hydrolase activity	2.93E-03
59	GO:0008794: arsenate reductase (glutaredoxin) activity	3.59E-03
60	GO:0019904: protein domain specific binding	3.59E-03
61	GO:0004177: aminopeptidase activity	3.59E-03
62	GO:0045551: cinnamyl-alcohol dehydrogenase activity	3.93E-03
63	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	4.30E-03
64	GO:0004022: alcohol dehydrogenase (NAD) activity	4.30E-03
65	GO:0005315: inorganic phosphate transmembrane transporter activity	4.30E-03
66	GO:0031072: heat shock protein binding	4.30E-03
67	GO:0003924: GTPase activity	4.57E-03
68	GO:0016787: hydrolase activity	5.07E-03
69	GO:0031418: L-ascorbic acid binding	5.84E-03
70	GO:0043130: ubiquitin binding	5.84E-03
71	GO:0051536: iron-sulfur cluster binding	5.84E-03
72	GO:0043424: protein histidine kinase binding	6.25E-03
73	GO:0005215: transporter activity	6.62E-03
74	GO:0004298: threonine-type endopeptidase activity	6.67E-03
75	GO:0019706: protein-cysteine S-palmitoyltransferase activity	6.67E-03
76	GO:0003756: protein disulfide isomerase activity	8.00E-03
77	GO:0016491: oxidoreductase activity	8.63E-03
78	GO:0008536: Ran GTPase binding	9.41E-03
79	GO:0001085: RNA polymerase II transcription factor binding	9.41E-03
80	GO:0005199: structural constituent of cell wall	9.41E-03
81	GO:0000166: nucleotide binding	9.47E-03
82	GO:0016853: isomerase activity	9.91E-03
83	GO:0050662: coenzyme binding	9.91E-03
84	GO:0005515: protein binding	1.02E-02
85	GO:0004872: receptor activity	1.04E-02
86	GO:0004518: nuclease activity	1.14E-02
87	GO:0003684: damaged DNA binding	1.25E-02
88	GO:0016413: O-acetyltransferase activity	1.36E-02
89	GO:0015250: water channel activity	1.42E-02
90	GO:0005507: copper ion binding	1.48E-02
91	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.53E-02
92	GO:0102483: scopolin beta-glucosidase activity	1.59E-02
93	GO:0004806: triglyceride lipase activity	1.59E-02
94	GO:0004683: calmodulin-dependent protein kinase activity	1.59E-02
95	GO:0005525: GTP binding	1.78E-02
96	GO:0004222: metalloendopeptidase activity	1.83E-02
97	GO:0030145: manganese ion binding	1.89E-02
98	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	1.89E-02
99	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.02E-02
100	GO:0008422: beta-glucosidase activity	2.15E-02
101	GO:0000149: SNARE binding	2.15E-02
102	GO:0004722: protein serine/threonine phosphatase activity	2.18E-02
103	GO:0043565: sequence-specific DNA binding	2.28E-02
104	GO:0004364: glutathione transferase activity	2.35E-02
105	GO:0005484: SNAP receptor activity	2.42E-02
106	GO:0005198: structural molecule activity	2.63E-02
107	GO:0009055: electron carrier activity	2.63E-02
108	GO:0008234: cysteine-type peptidase activity	3.22E-02
109	GO:0022857: transmembrane transporter activity	3.69E-02
110	GO:0016887: ATPase activity	3.78E-02
111	GO:0051082: unfolded protein binding	3.85E-02
112	GO:0015035: protein disulfide oxidoreductase activity	3.93E-02
113	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0046862: chromoplast membrane	0.00E+00
3	GO:0005829: cytosol	4.81E-06
4	GO:0005737: cytoplasm	9.91E-05
5	GO:0000138: Golgi trans cisterna	1.10E-04
6	GO:0005773: vacuole	2.39E-04
7	GO:0031902: late endosome membrane	2.42E-04
8	GO:0031314: extrinsic component of mitochondrial inner membrane	2.57E-04
9	GO:0005774: vacuolar membrane	2.85E-04
10	GO:0000502: proteasome complex	4.00E-04
11	GO:0030139: endocytic vesicle	4.25E-04
12	GO:0009530: primary cell wall	4.25E-04
13	GO:0005777: peroxisome	4.95E-04
14	GO:0030904: retromer complex	1.25E-03
15	GO:0030140: trans-Golgi network transport vesicle	1.25E-03
16	GO:0005771: multivesicular body	1.25E-03
17	GO:0016363: nuclear matrix	1.49E-03
18	GO:0005783: endoplasmic reticulum	1.58E-03
19	GO:0012507: ER to Golgi transport vesicle membrane	2.03E-03
20	GO:0009514: glyoxysome	2.32E-03
21	GO:0008540: proteasome regulatory particle, base subcomplex	2.93E-03
22	GO:0016602: CCAAT-binding factor complex	4.30E-03
23	GO:0005764: lysosome	4.66E-03
24	GO:0005750: mitochondrial respiratory chain complex III	4.66E-03
25	GO:0005769: early endosome	5.44E-03
26	GO:0070469: respiratory chain	6.25E-03
27	GO:0045271: respiratory chain complex I	6.25E-03
28	GO:0005839: proteasome core complex	6.67E-03
29	GO:0005770: late endosome	9.41E-03
30	GO:0005789: endoplasmic reticulum membrane	1.08E-02
31	GO:0005730: nucleolus	1.26E-02
32	GO:0000932: P-body	1.42E-02
33	GO:0005794: Golgi apparatus	1.44E-02
34	GO:0005788: endoplasmic reticulum lumen	1.47E-02
35	GO:0005618: cell wall	1.47E-02
36	GO:0005667: transcription factor complex	1.53E-02
37	GO:0005643: nuclear pore	1.71E-02
38	GO:0000325: plant-type vacuole	1.89E-02
39	GO:0016020: membrane	1.90E-02
40	GO:0031201: SNARE complex	2.29E-02
41	GO:0031966: mitochondrial membrane	2.85E-02
42	GO:0005635: nuclear envelope	3.14E-02
43	GO:0009570: chloroplast stroma	3.44E-02
44	GO:0005747: mitochondrial respiratory chain complex I	3.45E-02
45	GO:0005886: plasma membrane	3.87E-02
46	GO:0009506: plasmodesma	4.56E-02