co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G08980

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010111: glyoxysome organization	0.00E+00
2	GO:0045053: protein retention in Golgi apparatus	0.00E+00
3	GO:0006624: vacuolar protein processing	7.25E-07
4	GO:0006144: purine nucleobase metabolic process	3.37E-05
5	GO:0010201: response to continuous far red light stimulus by the high-irradiance response system	3.37E-05
6	GO:0048508: embryonic meristem development	3.37E-05
7	GO:0019628: urate catabolic process	3.37E-05
8	GO:0080173: male-female gamete recognition during double fertilization	3.37E-05
9	GO:0019483: beta-alanine biosynthetic process	8.48E-05
10	GO:0019395: fatty acid oxidation	8.48E-05
11	GO:0019521: D-gluconate metabolic process	8.48E-05
12	GO:0006212: uracil catabolic process	8.48E-05
13	GO:0009945: radial axis specification	8.48E-05
14	GO:0006635: fatty acid beta-oxidation	1.91E-04
15	GO:0080024: indolebutyric acid metabolic process	2.18E-04
16	GO:1903830: magnesium ion transmembrane transport	2.95E-04
17	GO:0015867: ATP transport	2.95E-04
18	GO:0015866: ADP transport	4.63E-04
19	GO:0010016: shoot system morphogenesis	5.53E-04
20	GO:0009942: longitudinal axis specification	5.53E-04
21	GO:0015693: magnesium ion transport	6.47E-04
22	GO:0009610: response to symbiotic fungus	6.47E-04
23	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	6.47E-04
24	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	6.47E-04
25	GO:0006605: protein targeting	7.44E-04
26	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	7.44E-04
27	GO:0051603: proteolysis involved in cellular protein catabolic process	8.13E-04
28	GO:0043562: cellular response to nitrogen levels	8.45E-04
29	GO:0006098: pentose-phosphate shunt	9.49E-04
30	GO:0048507: meristem development	9.49E-04
31	GO:0090332: stomatal closure	1.06E-03
32	GO:0009738: abscisic acid-activated signaling pathway	1.27E-03
33	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	1.40E-03
34	GO:0007034: vacuolar transport	1.65E-03
35	GO:0009933: meristem structural organization	1.65E-03
36	GO:0009737: response to abscisic acid	1.66E-03
37	GO:0090351: seedling development	1.78E-03
38	GO:0007031: peroxisome organization	1.78E-03
39	GO:0007030: Golgi organization	1.78E-03
40	GO:0009695: jasmonic acid biosynthetic process	2.19E-03
41	GO:0031408: oxylipin biosynthetic process	2.33E-03
42	GO:0006012: galactose metabolic process	2.63E-03
43	GO:0009306: protein secretion	2.78E-03
44	GO:0006508: proteolysis	2.89E-03
45	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	2.94E-03
46	GO:0010197: polar nucleus fusion	3.25E-03
47	GO:0009651: response to salt stress	3.30E-03
48	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	3.76E-03
49	GO:0030163: protein catabolic process	4.10E-03
50	GO:0006464: cellular protein modification process	4.28E-03
51	GO:0006914: autophagy	4.28E-03
52	GO:0006904: vesicle docking involved in exocytosis	4.46E-03
53	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	5.02E-03
54	GO:0006950: response to stress	5.40E-03
55	GO:0016049: cell growth	5.60E-03
56	GO:0016051: carbohydrate biosynthetic process	6.82E-03
57	GO:0030001: metal ion transport	7.47E-03
58	GO:0006839: mitochondrial transport	7.47E-03
59	GO:0000209: protein polyubiquitination	8.37E-03
60	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	9.30E-03
61	GO:0009611: response to wounding	9.39E-03
62	GO:0055114: oxidation-reduction process	1.12E-02
63	GO:0009414: response to water deprivation	1.82E-02
64	GO:0042742: defense response to bacterium	1.87E-02
65	GO:0006979: response to oxidative stress	1.88E-02
66	GO:0010150: leaf senescence	1.89E-02
67	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.05E-02
68	GO:0006470: protein dephosphorylation	2.08E-02
69	GO:0015031: protein transport	2.38E-02
70	GO:0009409: response to cold	2.53E-02
71	GO:0006970: response to osmotic stress	2.72E-02
72	GO:0009723: response to ethylene	2.87E-02
73	GO:0045892: negative regulation of transcription, DNA-templated	3.46E-02
74	GO:0006886: intracellular protein transport	3.50E-02
75	GO:0009751: response to salicylic acid	3.93E-02
76	GO:0006629: lipid metabolic process	3.97E-02
77	GO:0009753: response to jasmonic acid	4.18E-02

Rank	GO Term	Adjusted P value
1	GO:0017113: dihydropyrimidine dehydrogenase (NADP+) activity	0.00E+00
2	GO:0004846: urate oxidase activity	0.00E+00
3	GO:0004175: endopeptidase activity	4.82E-05
4	GO:0047216: inositol 3-alpha-galactosyltransferase activity	8.48E-05
5	GO:0003988: acetyl-CoA C-acyltransferase activity	8.48E-05
6	GO:0005047: signal recognition particle binding	1.47E-04
7	GO:0004197: cysteine-type endopeptidase activity	2.05E-04
8	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	3.77E-04
9	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	5.53E-04
10	GO:0005347: ATP transmembrane transporter activity	5.53E-04
11	GO:0004656: procollagen-proline 4-dioxygenase activity	5.53E-04
12	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	5.53E-04
13	GO:0015217: ADP transmembrane transporter activity	5.53E-04
14	GO:0003924: GTPase activity	6.55E-04
15	GO:0004869: cysteine-type endopeptidase inhibitor activity	7.44E-04
16	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	9.49E-04
17	GO:0045309: protein phosphorylated amino acid binding	1.06E-03
18	GO:0019904: protein domain specific binding	1.28E-03
19	GO:0015095: magnesium ion transmembrane transporter activity	1.52E-03
20	GO:0004190: aspartic-type endopeptidase activity	1.78E-03
21	GO:0031418: L-ascorbic acid binding	2.05E-03
22	GO:0005525: GTP binding	2.47E-03
23	GO:0046873: metal ion transmembrane transporter activity	3.25E-03
24	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	4.46E-03
25	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	6.82E-03
26	GO:0008234: cysteine-type peptidase activity	1.08E-02
27	GO:0016758: transferase activity, transferring hexosyl groups	1.48E-02
28	GO:0015297: antiporter activity	1.83E-02
29	GO:0046982: protein heterodimerization activity	2.55E-02
30	GO:0004842: ubiquitin-protein transferase activity	2.58E-02
31	GO:0043531: ADP binding	2.76E-02
32	GO:0003729: mRNA binding	2.78E-02
33	GO:0061630: ubiquitin protein ligase activity	3.12E-02
34	GO:0042803: protein homodimerization activity	3.54E-02
35	GO:0004722: protein serine/threonine phosphatase activity	3.66E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0005785: signal recognition particle receptor complex	0.00E+00
3	GO:0000323: lytic vacuole	7.25E-07
4	GO:0005777: peroxisome	1.86E-05
5	GO:0030139: endocytic vesicle	1.47E-04
6	GO:0005773: vacuole	3.50E-04
7	GO:0005829: cytosol	6.30E-04
8	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	8.45E-04
9	GO:0009514: glyoxysome	8.45E-04
10	GO:0005779: integral component of peroxisomal membrane	8.45E-04
11	GO:0017119: Golgi transport complex	1.17E-03
12	GO:0016602: CCAAT-binding factor complex	1.52E-03
13	GO:0031902: late endosome membrane	7.69E-03
14	GO:0005635: nuclear envelope	1.05E-02
15	GO:0005794: Golgi apparatus	1.31E-02
16	GO:0005768: endosome	1.68E-02
17	GO:0005789: endoplasmic reticulum membrane	2.86E-02
18	GO:0009570: chloroplast stroma	3.46E-02
19	GO:0005783: endoplasmic reticulum	3.74E-02
20	GO:0005743: mitochondrial inner membrane	3.77E-02
21	GO:0005886: plasma membrane	4.16E-02
22	GO:0043231: intracellular membrane-bounded organelle	4.26E-02