Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G08685

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0033614: chloroplast proton-transporting ATP synthase complex assembly0.00E+00
2GO:0090279: regulation of calcium ion import0.00E+00
3GO:0046322: negative regulation of fatty acid oxidation0.00E+00
4GO:0071474: cellular hyperosmotic response0.00E+00
5GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process0.00E+00
6GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process0.00E+00
7GO:0007638: mechanosensory behavior0.00E+00
8GO:0006114: glycerol biosynthetic process0.00E+00
9GO:0010306: rhamnogalacturonan II biosynthetic process2.91E-06
10GO:0009082: branched-chain amino acid biosynthetic process2.05E-05
11GO:0006629: lipid metabolic process4.25E-05
12GO:0051262: protein tetramerization1.81E-04
13GO:0071457: cellular response to ozone1.81E-04
14GO:1901562: response to paraquat3.05E-04
15GO:0090506: axillary shoot meristem initiation3.05E-04
16GO:0007231: osmosensory signaling pathway4.41E-04
17GO:0071484: cellular response to light intensity4.41E-04
18GO:0048868: pollen tube development4.44E-04
19GO:0033500: carbohydrate homeostasis5.87E-04
20GO:0009956: radial pattern formation5.87E-04
21GO:0071486: cellular response to high light intensity5.87E-04
22GO:0006552: leucine catabolic process5.87E-04
23GO:0009107: lipoate biosynthetic process7.44E-04
24GO:0071493: cellular response to UV-B7.44E-04
25GO:0006574: valine catabolic process9.07E-04
26GO:0006014: D-ribose metabolic process9.07E-04
27GO:0010304: PSII associated light-harvesting complex II catabolic process9.07E-04
28GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway9.07E-04
29GO:0006508: proteolysis1.02E-03
30GO:0009942: longitudinal axis specification1.08E-03
31GO:0009099: valine biosynthetic process1.08E-03
32GO:0010067: procambium histogenesis1.08E-03
33GO:0016051: carbohydrate biosynthetic process1.25E-03
34GO:0019745: pentacyclic triterpenoid biosynthetic process1.26E-03
35GO:0007155: cell adhesion1.46E-03
36GO:0019430: removal of superoxide radicals1.66E-03
37GO:0009097: isoleucine biosynthetic process1.66E-03
38GO:0007389: pattern specification process1.66E-03
39GO:0015996: chlorophyll catabolic process1.66E-03
40GO:0009245: lipid A biosynthetic process1.87E-03
41GO:0009098: leucine biosynthetic process2.09E-03
42GO:0006949: syncytium formation2.32E-03
43GO:0019684: photosynthesis, light reaction2.56E-03
44GO:0046856: phosphatidylinositol dephosphorylation2.56E-03
45GO:0010015: root morphogenesis2.56E-03
46GO:0006816: calcium ion transport2.56E-03
47GO:0010223: secondary shoot formation3.32E-03
48GO:0009933: meristem structural organization3.32E-03
49GO:0070588: calcium ion transmembrane transport3.59E-03
50GO:2000377: regulation of reactive oxygen species metabolic process4.15E-03
51GO:0008299: isoprenoid biosynthetic process4.43E-03
52GO:0007017: microtubule-based process4.43E-03
53GO:0010431: seed maturation4.73E-03
54GO:0006633: fatty acid biosynthetic process4.75E-03
55GO:0005975: carbohydrate metabolic process4.98E-03
56GO:0030245: cellulose catabolic process5.03E-03
57GO:0045490: pectin catabolic process5.21E-03
58GO:0009294: DNA mediated transformation5.34E-03
59GO:0001944: vasculature development5.34E-03
60GO:0009831: plant-type cell wall modification involved in multidimensional cell growth5.34E-03
61GO:0010089: xylem development5.66E-03
62GO:0019722: calcium-mediated signaling5.66E-03
63GO:0009739: response to gibberellin5.83E-03
64GO:0010087: phloem or xylem histogenesis6.31E-03
65GO:0009741: response to brassinosteroid6.64E-03
66GO:0071472: cellular response to salt stress6.64E-03
67GO:0010305: leaf vascular tissue pattern formation6.64E-03
68GO:0019252: starch biosynthetic process7.34E-03
69GO:0010583: response to cyclopentenone8.05E-03
70GO:0030163: protein catabolic process8.42E-03
71GO:0010090: trichome morphogenesis8.42E-03
72GO:0009860: pollen tube growth8.68E-03
73GO:0009828: plant-type cell wall loosening8.79E-03
74GO:0010252: auxin homeostasis8.79E-03
75GO:0007267: cell-cell signaling9.17E-03
76GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.03E-02
77GO:0016311: dephosphorylation1.16E-02
78GO:0071555: cell wall organization1.23E-02
79GO:0007568: aging1.33E-02
80GO:0009408: response to heat1.48E-02
81GO:0010114: response to red light1.70E-02
82GO:0009926: auxin polar transport1.70E-02
83GO:0009644: response to high light intensity1.79E-02
84GO:0009664: plant-type cell wall organization1.99E-02
85GO:0042538: hyperosmotic salinity response1.99E-02
86GO:0009740: gibberellic acid mediated signaling pathway2.58E-02
87GO:0009742: brassinosteroid mediated signaling pathway2.81E-02
88GO:0007623: circadian rhythm3.98E-02
89GO:0009617: response to bacterium4.51E-02
RankGO TermAdjusted P value
1GO:0043136: glycerol-3-phosphatase activity0.00E+00
2GO:0000121: glycerol-1-phosphatase activity0.00E+00
3GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity0.00E+00
4GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity0.00E+00
5GO:0102245: lupan-3beta,20-diol synthase activity0.00E+00
6GO:0004565: beta-galactosidase activity2.27E-06
7GO:0052656: L-isoleucine transaminase activity2.91E-06
8GO:0052654: L-leucine transaminase activity2.91E-06
9GO:0052655: L-valine transaminase activity2.91E-06
10GO:0004084: branched-chain-amino-acid transaminase activity5.57E-06
11GO:0034256: chlorophyll(ide) b reductase activity7.58E-05
12GO:0019210: kinase inhibitor activity7.58E-05
13GO:0047259: glucomannan 4-beta-mannosyltransferase activity7.58E-05
14GO:0005227: calcium activated cation channel activity7.58E-05
15GO:0030385: ferredoxin:thioredoxin reductase activity1.81E-04
16GO:0070402: NADPH binding3.05E-04
17GO:0042300: beta-amyrin synthase activity3.05E-04
18GO:0016992: lipoate synthase activity3.05E-04
19GO:0030570: pectate lyase activity3.24E-04
20GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity4.41E-04
21GO:0001872: (1->3)-beta-D-glucan binding4.41E-04
22GO:0004445: inositol-polyphosphate 5-phosphatase activity4.41E-04
23GO:0042299: lupeol synthase activity4.41E-04
24GO:0031177: phosphopantetheine binding9.07E-04
25GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity9.07E-04
26GO:0004784: superoxide dismutase activity9.07E-04
27GO:0051753: mannan synthase activity1.08E-03
28GO:0000035: acyl binding1.08E-03
29GO:0004747: ribokinase activity1.08E-03
30GO:0005261: cation channel activity1.08E-03
31GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process1.46E-03
32GO:0008865: fructokinase activity1.46E-03
33GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors1.87E-03
34GO:0009672: auxin:proton symporter activity2.09E-03
35GO:0015020: glucuronosyltransferase activity2.32E-03
36GO:0047372: acylglycerol lipase activity2.56E-03
37GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity2.80E-03
38GO:0005262: calcium channel activity3.06E-03
39GO:0010329: auxin efflux transmembrane transporter activity3.06E-03
40GO:0004190: aspartic-type endopeptidase activity3.59E-03
41GO:0005528: FK506 binding4.15E-03
42GO:0033612: receptor serine/threonine kinase binding4.73E-03
43GO:0008810: cellulase activity5.34E-03
44GO:0005102: receptor binding5.98E-03
45GO:0016853: isomerase activity6.99E-03
46GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds7.11E-03
47GO:0030246: carbohydrate binding7.29E-03
48GO:0016787: hydrolase activity8.39E-03
49GO:0016759: cellulose synthase activity8.79E-03
50GO:0005200: structural constituent of cytoskeleton9.17E-03
51GO:0008375: acetylglucosaminyltransferase activity1.07E-02
52GO:0030247: polysaccharide binding1.12E-02
53GO:0004871: signal transducer activity1.26E-02
54GO:0030145: manganese ion binding1.33E-02
55GO:0004712: protein serine/threonine/tyrosine kinase activity1.51E-02
56GO:0051539: 4 iron, 4 sulfur cluster binding1.55E-02
57GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.89E-02
58GO:0045735: nutrient reservoir activity2.36E-02
59GO:0004674: protein serine/threonine kinase activity2.91E-02
60GO:0016829: lyase activity3.34E-02
61GO:0004252: serine-type endopeptidase activity3.41E-02
RankGO TermAdjusted P value
1GO:0005576: extracellular region1.48E-04
2GO:0048046: apoplast3.69E-04
3GO:0015630: microtubule cytoskeleton4.41E-04
4GO:0031977: thylakoid lumen1.48E-03
5GO:0009506: plasmodesma2.12E-03
6GO:0005578: proteinaceous extracellular matrix3.06E-03
7GO:0009543: chloroplast thylakoid lumen3.79E-03
8GO:0005875: microtubule associated complex3.86E-03
9GO:0000139: Golgi membrane4.19E-03
10GO:0009535: chloroplast thylakoid membrane8.97E-03
11GO:0005773: vacuole1.02E-02
12GO:0009505: plant-type cell wall1.63E-02
13GO:0031966: mitochondrial membrane1.99E-02
14GO:0005618: cell wall2.11E-02
15GO:0005834: heterotrimeric G-protein complex2.47E-02
16GO:0016021: integral component of membrane4.02E-02
17GO:0031225: anchored component of membrane4.09E-02
18GO:0005615: extracellular space4.31E-02
19GO:0009570: chloroplast stroma4.41E-02
20GO:0046658: anchored component of plasma membrane4.85E-02
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Gene type



Gene DE type