co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G05160

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0080053: response to phenylalanine	0.00E+00
2	GO:0002376: immune system process	0.00E+00
3	GO:0080052: response to histidine	0.00E+00
4	GO:0006983: ER overload response	0.00E+00
5	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
6	GO:0072722: response to amitrole	0.00E+00
7	GO:0006592: ornithine biosynthetic process	0.00E+00
8	GO:0043201: response to leucine	0.00E+00
9	GO:0042742: defense response to bacterium	4.28E-11
10	GO:0034976: response to endoplasmic reticulum stress	2.38E-10
11	GO:0006102: isocitrate metabolic process	3.45E-08
12	GO:0045454: cell redox homeostasis	7.97E-08
13	GO:0046686: response to cadmium ion	8.01E-08
14	GO:0006099: tricarboxylic acid cycle	1.65E-07
15	GO:0010150: leaf senescence	8.09E-07
16	GO:0009751: response to salicylic acid	2.35E-06
17	GO:0006101: citrate metabolic process	2.46E-06
18	GO:0000302: response to reactive oxygen species	1.27E-05
19	GO:0009627: systemic acquired resistance	3.39E-05
20	GO:0006457: protein folding	4.45E-05
21	GO:0000162: tryptophan biosynthetic process	5.22E-05
22	GO:0006097: glyoxylate cycle	5.95E-05
23	GO:0009697: salicylic acid biosynthetic process	5.95E-05
24	GO:0006979: response to oxidative stress	1.73E-04
25	GO:0030091: protein repair	2.03E-04
26	GO:0043266: regulation of potassium ion transport	2.29E-04
27	GO:0046244: salicylic acid catabolic process	2.29E-04
28	GO:0034975: protein folding in endoplasmic reticulum	2.29E-04
29	GO:0035266: meristem growth	2.29E-04
30	GO:0007292: female gamete generation	2.29E-04
31	GO:0051938: L-glutamate import	2.29E-04
32	GO:1990641: response to iron ion starvation	2.29E-04
33	GO:0010200: response to chitin	4.66E-04
34	GO:0051788: response to misfolded protein	5.10E-04
35	GO:0044419: interspecies interaction between organisms	5.10E-04
36	GO:0043066: negative regulation of apoptotic process	5.10E-04
37	GO:0015865: purine nucleotide transport	5.10E-04
38	GO:0042939: tripeptide transport	5.10E-04
39	GO:0030003: cellular cation homeostasis	5.10E-04
40	GO:0008535: respiratory chain complex IV assembly	5.10E-04
41	GO:0043091: L-arginine import	5.10E-04
42	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	5.10E-04
43	GO:0009866: induced systemic resistance, ethylene mediated signaling pathway	5.10E-04
44	GO:0009817: defense response to fungus, incompatible interaction	5.38E-04
45	GO:0045087: innate immune response	7.25E-04
46	GO:0090351: seedling development	8.00E-04
47	GO:0010272: response to silver ion	8.29E-04
48	GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	8.29E-04
49	GO:0060968: regulation of gene silencing	8.29E-04
50	GO:0042542: response to hydrogen peroxide	9.46E-04
51	GO:0009617: response to bacterium	1.06E-03
52	GO:0006874: cellular calcium ion homeostasis	1.08E-03
53	GO:0003333: amino acid transmembrane transport	1.18E-03
54	GO:0016998: cell wall macromolecule catabolic process	1.18E-03
55	GO:0010116: positive regulation of abscisic acid biosynthetic process	1.18E-03
56	GO:0002239: response to oomycetes	1.18E-03
57	GO:0046902: regulation of mitochondrial membrane permeability	1.18E-03
58	GO:0031348: negative regulation of defense response	1.29E-03
59	GO:0006486: protein glycosylation	1.44E-03
60	GO:0042938: dipeptide transport	1.57E-03
61	GO:0080037: negative regulation of cytokinin-activated signaling pathway	1.57E-03
62	GO:0051365: cellular response to potassium ion starvation	1.57E-03
63	GO:0010387: COP9 signalosome assembly	1.57E-03
64	GO:0045088: regulation of innate immune response	1.57E-03
65	GO:2000762: regulation of phenylpropanoid metabolic process	2.01E-03
66	GO:0046283: anthocyanin-containing compound metabolic process	2.01E-03
67	GO:0000304: response to singlet oxygen	2.01E-03
68	GO:0034052: positive regulation of plant-type hypersensitive response	2.01E-03
69	GO:0009851: auxin biosynthetic process	2.21E-03
70	GO:0010193: response to ozone	2.36E-03
71	GO:0018258: protein O-linked glycosylation via hydroxyproline	2.48E-03
72	GO:0002238: response to molecule of fungal origin	2.48E-03
73	GO:0006014: D-ribose metabolic process	2.48E-03
74	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	2.48E-03
75	GO:0010405: arabinogalactan protein metabolic process	2.48E-03
76	GO:0048827: phyllome development	2.48E-03
77	GO:0010256: endomembrane system organization	2.48E-03
78	GO:0048232: male gamete generation	2.48E-03
79	GO:0043248: proteasome assembly	2.48E-03
80	GO:0042372: phylloquinone biosynthetic process	2.97E-03
81	GO:0006120: mitochondrial electron transport, NADH to ubiquinone	2.97E-03
82	GO:0010555: response to mannitol	2.97E-03
83	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	2.97E-03
84	GO:0009651: response to salt stress	3.37E-03
85	GO:1900057: positive regulation of leaf senescence	3.50E-03
86	GO:1902074: response to salt	3.50E-03
87	GO:1900056: negative regulation of leaf senescence	3.50E-03
88	GO:0000338: protein deneddylation	3.50E-03
89	GO:0006468: protein phosphorylation	4.04E-03
90	GO:0030162: regulation of proteolysis	4.06E-03
91	GO:0043068: positive regulation of programmed cell death	4.06E-03
92	GO:0010078: maintenance of root meristem identity	4.06E-03
93	GO:0055075: potassium ion homeostasis	4.06E-03
94	GO:0006952: defense response	4.28E-03
95	GO:0009409: response to cold	4.34E-03
96	GO:0006526: arginine biosynthetic process	4.65E-03
97	GO:0010204: defense response signaling pathway, resistance gene-independent	4.65E-03
98	GO:0030968: endoplasmic reticulum unfolded protein response	4.65E-03
99	GO:0009808: lignin metabolic process	4.65E-03
100	GO:0009407: toxin catabolic process	4.89E-03
101	GO:0010043: response to zinc ion	5.13E-03
102	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	5.20E-03
103	GO:0010112: regulation of systemic acquired resistance	5.27E-03
104	GO:0051865: protein autoubiquitination	5.27E-03
105	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	5.91E-03
106	GO:0010205: photoinhibition	5.91E-03
107	GO:0043067: regulation of programmed cell death	5.91E-03
108	GO:0048354: mucilage biosynthetic process involved in seed coat development	5.91E-03
109	GO:0007064: mitotic sister chromatid cohesion	6.58E-03
110	GO:0006032: chitin catabolic process	6.58E-03
111	GO:0009688: abscisic acid biosynthetic process	6.58E-03
112	GO:0043069: negative regulation of programmed cell death	6.58E-03
113	GO:0048829: root cap development	6.58E-03
114	GO:0051707: response to other organism	7.25E-03
115	GO:0052544: defense response by callose deposition in cell wall	7.28E-03
116	GO:0009089: lysine biosynthetic process via diaminopimelate	7.28E-03
117	GO:0000272: polysaccharide catabolic process	7.28E-03
118	GO:0010015: root morphogenesis	7.28E-03
119	GO:0000038: very long-chain fatty acid metabolic process	7.28E-03
120	GO:0006816: calcium ion transport	7.28E-03
121	GO:0006790: sulfur compound metabolic process	8.00E-03
122	GO:0012501: programmed cell death	8.00E-03
123	GO:0018107: peptidyl-threonine phosphorylation	8.75E-03
124	GO:0010075: regulation of meristem growth	8.75E-03
125	GO:0031347: regulation of defense response	8.78E-03
126	GO:0009846: pollen germination	9.11E-03
127	GO:0009416: response to light stimulus	9.37E-03
128	GO:0009933: meristem structural organization	9.52E-03
129	GO:0009934: regulation of meristem structural organization	9.52E-03
130	GO:0002237: response to molecule of bacterial origin	9.52E-03
131	GO:0046854: phosphatidylinositol phosphorylation	1.03E-02
132	GO:0009737: response to abscisic acid	1.05E-02
133	GO:0009863: salicylic acid mediated signaling pathway	1.20E-02
134	GO:0009626: plant-type hypersensitive response	1.23E-02
135	GO:0009620: response to fungus	1.27E-02
136	GO:0030433: ubiquitin-dependent ERAD pathway	1.46E-02
137	GO:0071456: cellular response to hypoxia	1.46E-02
138	GO:0019748: secondary metabolic process	1.46E-02
139	GO:0009625: response to insect	1.56E-02
140	GO:0006012: galactose metabolic process	1.56E-02
141	GO:0032259: methylation	1.61E-02
142	GO:0009306: protein secretion	1.65E-02
143	GO:0010584: pollen exine formation	1.65E-02
144	GO:0009408: response to heat	1.70E-02
145	GO:0042391: regulation of membrane potential	1.85E-02
146	GO:0000413: protein peptidyl-prolyl isomerization	1.85E-02
147	GO:0010118: stomatal movement	1.85E-02
148	GO:0042631: cellular response to water deprivation	1.85E-02
149	GO:0048868: pollen tube development	1.95E-02
150	GO:0009646: response to absence of light	2.05E-02
151	GO:0009790: embryo development	2.05E-02
152	GO:0019252: starch biosynthetic process	2.16E-02
153	GO:0002229: defense response to oomycetes	2.27E-02
154	GO:0040008: regulation of growth	2.31E-02
155	GO:0009630: gravitropism	2.37E-02
156	GO:0006464: cellular protein modification process	2.60E-02
157	GO:0009567: double fertilization forming a zygote and endosperm	2.60E-02
158	GO:0009615: response to virus	2.94E-02
159	GO:0009816: defense response to bacterium, incompatible interaction	3.06E-02
160	GO:0016311: dephosphorylation	3.43E-02
161	GO:0008219: cell death	3.56E-02
162	GO:0010311: lateral root formation	3.68E-02
163	GO:0055114: oxidation-reduction process	3.81E-02
164	GO:0006499: N-terminal protein myristoylation	3.81E-02
165	GO:0048527: lateral root development	3.94E-02
166	GO:0006970: response to osmotic stress	4.02E-02
167	GO:0006865: amino acid transport	4.08E-02
168	GO:0016051: carbohydrate biosynthetic process	4.21E-02
169	GO:0006839: mitochondrial transport	4.62E-02

Rank	GO Term	Adjusted P value
1	GO:0003980: UDP-glucose:glycoprotein glucosyltransferase activity	0.00E+00
2	GO:0016312: inositol bisphosphate phosphatase activity	0.00E+00
3	GO:0008777: acetylornithine deacetylase activity	0.00E+00
4	GO:0051670: inulinase activity	0.00E+00
5	GO:0050220: prostaglandin-E synthase activity	0.00E+00
6	GO:0003756: protein disulfide isomerase activity	1.74E-09
7	GO:0003994: aconitate hydratase activity	2.46E-06
8	GO:0004449: isocitrate dehydrogenase (NAD+) activity	2.04E-05
9	GO:0051920: peroxiredoxin activity	1.21E-04
10	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	1.21E-04
11	GO:0004674: protein serine/threonine kinase activity	1.31E-04
12	GO:0016209: antioxidant activity	2.03E-04
13	GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity	2.29E-04
14	GO:0008909: isochorismate synthase activity	2.29E-04
15	GO:0031219: levanase activity	2.29E-04
16	GO:0010285: L,L-diaminopimelate aminotransferase activity	2.29E-04
17	GO:0004425: indole-3-glycerol-phosphate synthase activity	2.29E-04
18	GO:0033984: indole-3-glycerol-phosphate lyase activity	2.29E-04
19	GO:0051669: fructan beta-fructosidase activity	2.29E-04
20	GO:0004048: anthranilate phosphoribosyltransferase activity	2.29E-04
21	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	2.29E-04
22	GO:0016301: kinase activity	2.33E-04
23	GO:0015035: protein disulfide oxidoreductase activity	3.65E-04
24	GO:0004775: succinate-CoA ligase (ADP-forming) activity	5.10E-04
25	GO:0004338: glucan exo-1,3-beta-glucosidase activity	5.10E-04
26	GO:0015036: disulfide oxidoreductase activity	5.10E-04
27	GO:0042937: tripeptide transporter activity	5.10E-04
28	GO:0004776: succinate-CoA ligase (GDP-forming) activity	5.10E-04
29	GO:0004566: beta-glucuronidase activity	5.10E-04
30	GO:0004970: ionotropic glutamate receptor activity	8.00E-04
31	GO:0005217: intracellular ligand-gated ion channel activity	8.00E-04
32	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	8.29E-04
33	GO:0000030: mannosyltransferase activity	8.29E-04
34	GO:0008430: selenium binding	8.29E-04
35	GO:0051539: 4 iron, 4 sulfur cluster binding	8.54E-04
36	GO:0004364: glutathione transferase activity	9.46E-04
37	GO:0009055: electron carrier activity	9.90E-04
38	GO:0015181: arginine transmembrane transporter activity	1.18E-03
39	GO:0015189: L-lysine transmembrane transporter activity	1.18E-03
40	GO:0035529: NADH pyrophosphatase activity	1.18E-03
41	GO:0005507: copper ion binding	1.19E-03
42	GO:0004031: aldehyde oxidase activity	1.57E-03
43	GO:0050302: indole-3-acetaldehyde oxidase activity	1.57E-03
44	GO:0004834: tryptophan synthase activity	1.57E-03
45	GO:0042936: dipeptide transporter activity	1.57E-03
46	GO:0005313: L-glutamate transmembrane transporter activity	1.57E-03
47	GO:0005496: steroid binding	2.01E-03
48	GO:0047631: ADP-ribose diphosphatase activity	2.01E-03
49	GO:0005471: ATP:ADP antiporter activity	2.01E-03
50	GO:0015301: anion:anion antiporter activity	2.01E-03
51	GO:0005452: inorganic anion exchanger activity	2.01E-03
52	GO:0016853: isomerase activity	2.06E-03
53	GO:0000210: NAD+ diphosphatase activity	2.48E-03
54	GO:0036402: proteasome-activating ATPase activity	2.48E-03
55	GO:0030976: thiamine pyrophosphate binding	2.48E-03
56	GO:1990714: hydroxyproline O-galactosyltransferase activity	2.48E-03
57	GO:0016758: transferase activity, transferring hexosyl groups	2.89E-03
58	GO:0004747: ribokinase activity	2.97E-03
59	GO:0005261: cation channel activity	2.97E-03
60	GO:0004602: glutathione peroxidase activity	2.97E-03
61	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	2.97E-03
62	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	2.97E-03
63	GO:0008483: transaminase activity	3.04E-03
64	GO:0008320: protein transmembrane transporter activity	3.50E-03
65	GO:0043295: glutathione binding	3.50E-03
66	GO:0030247: polysaccharide binding	4.01E-03
67	GO:0008865: fructokinase activity	4.06E-03
68	GO:0004034: aldose 1-epimerase activity	4.06E-03
69	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	4.22E-03
70	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	5.13E-03
71	GO:0030955: potassium ion binding	5.91E-03
72	GO:0004743: pyruvate kinase activity	5.91E-03
73	GO:0015174: basic amino acid transmembrane transporter activity	5.91E-03
74	GO:0004568: chitinase activity	6.58E-03
75	GO:0008171: O-methyltransferase activity	6.58E-03
76	GO:0005509: calcium ion binding	7.14E-03
77	GO:0004129: cytochrome-c oxidase activity	7.28E-03
78	GO:0008794: arsenate reductase (glutaredoxin) activity	7.28E-03
79	GO:0008559: xenobiotic-transporting ATPase activity	7.28E-03
80	GO:0008378: galactosyltransferase activity	8.00E-03
81	GO:0005262: calcium channel activity	8.75E-03
82	GO:0051287: NAD binding	8.78E-03
83	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	9.52E-03
84	GO:0008233: peptidase activity	1.01E-02
85	GO:0017025: TBP-class protein binding	1.03E-02
86	GO:0008061: chitin binding	1.03E-02
87	GO:0004190: aspartic-type endopeptidase activity	1.03E-02
88	GO:0030552: cAMP binding	1.03E-02
89	GO:0030553: cGMP binding	1.03E-02
90	GO:0015171: amino acid transmembrane transporter activity	1.08E-02
91	GO:0005216: ion channel activity	1.28E-02
92	GO:0004298: threonine-type endopeptidase activity	1.37E-02
93	GO:0008810: cellulase activity	1.56E-02
94	GO:0005249: voltage-gated potassium channel activity	1.85E-02
95	GO:0030551: cyclic nucleotide binding	1.85E-02
96	GO:0043565: sequence-specific DNA binding	2.27E-02
97	GO:0048038: quinone binding	2.27E-02
98	GO:0008137: NADH dehydrogenase (ubiquinone) activity	2.27E-02
99	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.48E-02
100	GO:0005524: ATP binding	2.53E-02
101	GO:0008237: metallopeptidase activity	2.71E-02
102	GO:0051213: dioxygenase activity	2.94E-02
103	GO:0004683: calmodulin-dependent protein kinase activity	3.31E-02
104	GO:0008168: methyltransferase activity	3.60E-02
105	GO:0000287: magnesium ion binding	3.67E-02
106	GO:0015238: drug transmembrane transporter activity	3.68E-02
107	GO:0004601: peroxidase activity	3.74E-02
108	GO:0004222: metalloendopeptidase activity	3.81E-02
109	GO:0050897: cobalt ion binding	3.94E-02
110	GO:0030145: manganese ion binding	3.94E-02
111	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.21E-02
112	GO:0050660: flavin adenine dinucleotide binding	4.32E-02
113	GO:0000987: core promoter proximal region sequence-specific DNA binding	4.34E-02
114	GO:0004712: protein serine/threonine/tyrosine kinase activity	4.48E-02

Rank	GO Term	Adjusted P value
1	GO:0000327: lytic vacuole within protein storage vacuole	0.00E+00
2	GO:0005783: endoplasmic reticulum	3.28E-11
3	GO:0005788: endoplasmic reticulum lumen	3.32E-08
4	GO:0005886: plasma membrane	8.80E-05
5	GO:0005765: lysosomal membrane	4.90E-04
6	GO:0031314: extrinsic component of mitochondrial inner membrane	5.10E-04
7	GO:0030134: ER to Golgi transport vesicle	5.10E-04
8	GO:0005782: peroxisomal matrix	8.29E-04
9	GO:0005829: cytosol	9.27E-04
10	GO:0030660: Golgi-associated vesicle membrane	1.57E-03
11	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	1.57E-03
12	GO:0009898: cytoplasmic side of plasma membrane	1.57E-03
13	GO:0005746: mitochondrial respiratory chain	2.01E-03
14	GO:0005801: cis-Golgi network	2.97E-03
15	GO:0031597: cytosolic proteasome complex	2.97E-03
16	GO:0031595: nuclear proteasome complex	3.50E-03
17	GO:0009505: plant-type cell wall	3.73E-03
18	GO:0045273: respiratory chain complex II	4.06E-03
19	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	4.06E-03
20	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	4.06E-03
21	GO:0048046: apoplast	4.08E-03
22	GO:0000326: protein storage vacuole	4.65E-03
23	GO:0000325: plant-type vacuole	5.13E-03
24	GO:0008180: COP9 signalosome	5.27E-03
25	GO:0008540: proteasome regulatory particle, base subcomplex	5.91E-03
26	GO:0000502: proteasome complex	9.78E-03
27	GO:0016021: integral component of membrane	1.04E-02
28	GO:0005618: cell wall	1.34E-02
29	GO:0005839: proteasome core complex	1.37E-02
30	GO:0009507: chloroplast	1.53E-02
31	GO:0005743: mitochondrial inner membrane	1.55E-02
32	GO:0005789: endoplasmic reticulum membrane	1.71E-02
33	GO:0005774: vacuolar membrane	2.65E-02
34	GO:0046658: anchored component of plasma membrane	3.20E-02
35	GO:0019005: SCF ubiquitin ligase complex	3.56E-02
36	GO:0009536: plastid	3.63E-02
37	GO:0031969: chloroplast membrane	4.62E-02