GO Enrichment Analysis of Co-expressed Genes with
AT4G05090
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 2 | GO:0007638: mechanosensory behavior | 0.00E+00 |
| 3 | GO:0010206: photosystem II repair | 5.84E-05 |
| 4 | GO:0071588: hydrogen peroxide mediated signaling pathway | 7.58E-05 |
| 5 | GO:0046520: sphingoid biosynthetic process | 7.58E-05 |
| 6 | GO:0010143: cutin biosynthetic process | 1.55E-04 |
| 7 | GO:0006521: regulation of cellular amino acid metabolic process | 1.81E-04 |
| 8 | GO:0045454: cell redox homeostasis | 2.73E-04 |
| 9 | GO:2001295: malonyl-CoA biosynthetic process | 3.05E-04 |
| 10 | GO:1901332: negative regulation of lateral root development | 4.41E-04 |
| 11 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 4.41E-04 |
| 12 | GO:0007231: osmosensory signaling pathway | 4.41E-04 |
| 13 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 4.41E-04 |
| 14 | GO:0033500: carbohydrate homeostasis | 5.87E-04 |
| 15 | GO:0006546: glycine catabolic process | 5.87E-04 |
| 16 | GO:0015994: chlorophyll metabolic process | 5.87E-04 |
| 17 | GO:0006633: fatty acid biosynthetic process | 5.89E-04 |
| 18 | GO:0006461: protein complex assembly | 7.44E-04 |
| 19 | GO:1902456: regulation of stomatal opening | 9.07E-04 |
| 20 | GO:0006751: glutathione catabolic process | 9.07E-04 |
| 21 | GO:0010019: chloroplast-nucleus signaling pathway | 1.08E-03 |
| 22 | GO:0009645: response to low light intensity stimulus | 1.26E-03 |
| 23 | GO:0010196: nonphotochemical quenching | 1.26E-03 |
| 24 | GO:0045010: actin nucleation | 1.46E-03 |
| 25 | GO:0009657: plastid organization | 1.66E-03 |
| 26 | GO:0009638: phototropism | 2.09E-03 |
| 27 | GO:0009684: indoleacetic acid biosynthetic process | 2.56E-03 |
| 28 | GO:0006816: calcium ion transport | 2.56E-03 |
| 29 | GO:0008152: metabolic process | 2.74E-03 |
| 30 | GO:0016024: CDP-diacylglycerol biosynthetic process | 2.80E-03 |
| 31 | GO:0030036: actin cytoskeleton organization | 3.06E-03 |
| 32 | GO:0010207: photosystem II assembly | 3.32E-03 |
| 33 | GO:0070588: calcium ion transmembrane transport | 3.59E-03 |
| 34 | GO:0006833: water transport | 3.86E-03 |
| 35 | GO:0009409: response to cold | 4.19E-03 |
| 36 | GO:0009768: photosynthesis, light harvesting in photosystem I | 4.43E-03 |
| 37 | GO:0007017: microtubule-based process | 4.43E-03 |
| 38 | GO:0048511: rhythmic process | 4.73E-03 |
| 39 | GO:0006012: galactose metabolic process | 5.34E-03 |
| 40 | GO:0034220: ion transmembrane transport | 6.31E-03 |
| 41 | GO:0000413: protein peptidyl-prolyl isomerization | 6.31E-03 |
| 42 | GO:0042752: regulation of circadian rhythm | 6.99E-03 |
| 43 | GO:0000302: response to reactive oxygen species | 7.69E-03 |
| 44 | GO:0010583: response to cyclopentenone | 8.05E-03 |
| 45 | GO:0009658: chloroplast organization | 8.06E-03 |
| 46 | GO:0030163: protein catabolic process | 8.42E-03 |
| 47 | GO:0010090: trichome morphogenesis | 8.42E-03 |
| 48 | GO:0051607: defense response to virus | 9.56E-03 |
| 49 | GO:0042128: nitrate assimilation | 1.07E-02 |
| 50 | GO:0010411: xyloglucan metabolic process | 1.12E-02 |
| 51 | GO:0015979: photosynthesis | 1.14E-02 |
| 52 | GO:0018298: protein-chromophore linkage | 1.20E-02 |
| 53 | GO:0009817: defense response to fungus, incompatible interaction | 1.20E-02 |
| 54 | GO:0045892: negative regulation of transcription, DNA-templated | 1.22E-02 |
| 55 | GO:0010311: lateral root formation | 1.24E-02 |
| 56 | GO:0009631: cold acclimation | 1.33E-02 |
| 57 | GO:0032259: methylation | 1.42E-02 |
| 58 | GO:0034599: cellular response to oxidative stress | 1.46E-02 |
| 59 | GO:0009640: photomorphogenesis | 1.70E-02 |
| 60 | GO:0042546: cell wall biogenesis | 1.75E-02 |
| 61 | GO:0009644: response to high light intensity | 1.79E-02 |
| 62 | GO:0006810: transport | 1.99E-02 |
| 63 | GO:0005975: carbohydrate metabolic process | 2.08E-02 |
| 64 | GO:0009585: red, far-red light phototransduction | 2.10E-02 |
| 65 | GO:0006857: oligopeptide transport | 2.20E-02 |
| 66 | GO:0009735: response to cytokinin | 2.41E-02 |
| 67 | GO:0009740: gibberellic acid mediated signaling pathway | 2.58E-02 |
| 68 | GO:0042744: hydrogen peroxide catabolic process | 3.47E-02 |
| 69 | GO:0009739: response to gibberellin | 4.31E-02 |
| 70 | GO:0007166: cell surface receptor signaling pathway | 4.37E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043864: indoleacetamide hydrolase activity | 0.00E+00 |
| 2 | GO:0005528: FK506 binding | 5.44E-08 |
| 3 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.10E-07 |
| 4 | GO:0051920: peroxiredoxin activity | 2.05E-05 |
| 5 | GO:0016209: antioxidant activity | 3.68E-05 |
| 6 | GO:0000170: sphingosine hydroxylase activity | 7.58E-05 |
| 7 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 1.81E-04 |
| 8 | GO:0047746: chlorophyllase activity | 1.81E-04 |
| 9 | GO:0016868: intramolecular transferase activity, phosphotransferases | 1.81E-04 |
| 10 | GO:0003839: gamma-glutamylcyclotransferase activity | 1.81E-04 |
| 11 | GO:0004047: aminomethyltransferase activity | 1.81E-04 |
| 12 | GO:0042284: sphingolipid delta-4 desaturase activity | 1.81E-04 |
| 13 | GO:0008967: phosphoglycolate phosphatase activity | 1.81E-04 |
| 14 | GO:0004075: biotin carboxylase activity | 3.05E-04 |
| 15 | GO:0030267: glyoxylate reductase (NADP) activity | 3.05E-04 |
| 16 | GO:0050734: hydroxycinnamoyltransferase activity | 3.05E-04 |
| 17 | GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 5.87E-04 |
| 18 | GO:0016836: hydro-lyase activity | 5.87E-04 |
| 19 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 5.87E-04 |
| 20 | GO:0003989: acetyl-CoA carboxylase activity | 7.44E-04 |
| 21 | GO:0004040: amidase activity | 7.44E-04 |
| 22 | GO:0016688: L-ascorbate peroxidase activity | 9.07E-04 |
| 23 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 9.07E-04 |
| 24 | GO:0004130: cytochrome-c peroxidase activity | 9.07E-04 |
| 25 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 9.07E-04 |
| 26 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 1.08E-03 |
| 27 | GO:0004034: aldose 1-epimerase activity | 1.46E-03 |
| 28 | GO:0004033: aldo-keto reductase (NADP) activity | 1.46E-03 |
| 29 | GO:0031072: heat shock protein binding | 3.06E-03 |
| 30 | GO:0005262: calcium channel activity | 3.06E-03 |
| 31 | GO:0004565: beta-galactosidase activity | 3.06E-03 |
| 32 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 3.86E-03 |
| 33 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 3.86E-03 |
| 34 | GO:0031409: pigment binding | 3.86E-03 |
| 35 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 3.86E-03 |
| 36 | GO:0003756: protein disulfide isomerase activity | 5.66E-03 |
| 37 | GO:0016853: isomerase activity | 6.99E-03 |
| 38 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 7.69E-03 |
| 39 | GO:0048038: quinone binding | 7.69E-03 |
| 40 | GO:0008168: methyltransferase activity | 7.76E-03 |
| 41 | GO:0004601: peroxidase activity | 8.06E-03 |
| 42 | GO:0016787: hydrolase activity | 8.39E-03 |
| 43 | GO:0016791: phosphatase activity | 8.79E-03 |
| 44 | GO:0005200: structural constituent of cytoskeleton | 9.17E-03 |
| 45 | GO:0008483: transaminase activity | 9.17E-03 |
| 46 | GO:0016597: amino acid binding | 9.56E-03 |
| 47 | GO:0015250: water channel activity | 9.95E-03 |
| 48 | GO:0016168: chlorophyll binding | 1.03E-02 |
| 49 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 1.12E-02 |
| 50 | GO:0008236: serine-type peptidase activity | 1.16E-02 |
| 51 | GO:0030145: manganese ion binding | 1.33E-02 |
| 52 | GO:0003993: acid phosphatase activity | 1.46E-02 |
| 53 | GO:0015293: symporter activity | 1.84E-02 |
| 54 | GO:0008289: lipid binding | 2.06E-02 |
| 55 | GO:0045735: nutrient reservoir activity | 2.36E-02 |
| 56 | GO:0051082: unfolded protein binding | 2.69E-02 |
| 57 | GO:0016746: transferase activity, transferring acyl groups | 2.75E-02 |
| 58 | GO:0004252: serine-type endopeptidase activity | 3.41E-02 |
| 59 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 3.47E-02 |
| 60 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 3.78E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009534: chloroplast thylakoid | 1.33E-14 |
| 2 | GO:0009507: chloroplast | 5.83E-13 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 2.99E-12 |
| 4 | GO:0009543: chloroplast thylakoid lumen | 2.07E-11 |
| 5 | GO:0009570: chloroplast stroma | 2.18E-11 |
| 6 | GO:0009941: chloroplast envelope | 4.50E-09 |
| 7 | GO:0031977: thylakoid lumen | 1.10E-07 |
| 8 | GO:0009533: chloroplast stromal thylakoid | 1.72E-07 |
| 9 | GO:0009782: photosystem I antenna complex | 7.58E-05 |
| 10 | GO:0009579: thylakoid | 2.07E-04 |
| 11 | GO:0048046: apoplast | 3.69E-04 |
| 12 | GO:0010287: plastoglobule | 4.13E-04 |
| 13 | GO:0031209: SCAR complex | 9.07E-04 |
| 14 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.87E-03 |
| 15 | GO:0045298: tubulin complex | 1.87E-03 |
| 16 | GO:0030095: chloroplast photosystem II | 3.32E-03 |
| 17 | GO:0030076: light-harvesting complex | 3.59E-03 |
| 18 | GO:0042651: thylakoid membrane | 4.43E-03 |
| 19 | GO:0009523: photosystem II | 7.34E-03 |
| 20 | GO:0010319: stromule | 9.17E-03 |
| 21 | GO:0009505: plant-type cell wall | 1.63E-02 |
| 22 | GO:0005887: integral component of plasma membrane | 2.01E-02 |
| 23 | GO:0016021: integral component of membrane | 2.29E-02 |
| 24 | GO:0016020: membrane | 2.35E-02 |
| 25 | GO:0009706: chloroplast inner membrane | 2.69E-02 |
| 26 | GO:0046658: anchored component of plasma membrane | 4.85E-02 |