Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G03450

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0070212: protein poly-ADP-ribosylation0.00E+00
2GO:0045792: negative regulation of cell size0.00E+00
3GO:0051553: flavone biosynthetic process0.00E+00
4GO:1900367: positive regulation of defense response to insect0.00E+00
5GO:0071327: cellular response to trehalose stimulus0.00E+00
6GO:0072660: maintenance of protein location in plasma membrane0.00E+00
7GO:0042891: antibiotic transport0.00E+00
8GO:0051245: negative regulation of cellular defense response0.00E+00
9GO:0009617: response to bacterium8.41E-13
10GO:0042742: defense response to bacterium6.26E-12
11GO:0006952: defense response1.44E-11
12GO:0006468: protein phosphorylation7.14E-11
13GO:0010200: response to chitin3.66E-10
14GO:0009816: defense response to bacterium, incompatible interaction9.89E-09
15GO:0009627: systemic acquired resistance3.71E-07
16GO:0009751: response to salicylic acid3.76E-07
17GO:0080142: regulation of salicylic acid biosynthetic process7.62E-07
18GO:0043069: negative regulation of programmed cell death1.05E-06
19GO:0051707: response to other organism2.83E-06
20GO:0010942: positive regulation of cell death3.29E-06
21GO:0010618: aerenchyma formation6.25E-06
22GO:0031349: positive regulation of defense response6.25E-06
23GO:0080151: positive regulation of salicylic acid mediated signaling pathway6.25E-06
24GO:0010150: leaf senescence8.80E-06
25GO:0009626: plant-type hypersensitive response1.35E-05
26GO:0009625: response to insect1.77E-05
27GO:0006612: protein targeting to membrane4.81E-05
28GO:0048194: Golgi vesicle budding4.81E-05
29GO:0010363: regulation of plant-type hypersensitive response8.50E-05
30GO:0060548: negative regulation of cell death8.50E-05
31GO:0050832: defense response to fungus9.26E-05
32GO:0070588: calcium ion transmembrane transport1.27E-04
33GO:0009759: indole glucosinolate biosynthetic process1.90E-04
34GO:0010310: regulation of hydrogen peroxide metabolic process2.57E-04
35GO:0031348: negative regulation of defense response2.60E-04
36GO:0009737: response to abscisic acid2.95E-04
37GO:0010044: response to aluminum ion3.33E-04
38GO:0046470: phosphatidylcholine metabolic process3.33E-04
39GO:0070370: cellular heat acclimation3.33E-04
40GO:0006680: glucosylceramide catabolic process3.73E-04
41GO:0060862: negative regulation of floral organ abscission3.73E-04
42GO:0009609: response to symbiotic bacterium3.73E-04
43GO:0010266: response to vitamin B13.73E-04
44GO:0009700: indole phytoalexin biosynthetic process3.73E-04
45GO:0055081: anion homeostasis3.73E-04
46GO:0010230: alternative respiration3.73E-04
47GO:0006643: membrane lipid metabolic process3.73E-04
48GO:1901183: positive regulation of camalexin biosynthetic process3.73E-04
49GO:0061025: membrane fusion4.92E-04
50GO:0043562: cellular response to nitrogen levels5.11E-04
51GO:0010120: camalexin biosynthetic process5.11E-04
52GO:0000302: response to reactive oxygen species5.87E-04
53GO:0010193: response to ozone5.87E-04
54GO:0010112: regulation of systemic acquired resistance6.13E-04
55GO:0051865: protein autoubiquitination6.13E-04
56GO:0007166: cell surface receptor signaling pathway6.24E-04
57GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway7.24E-04
58GO:0010541: acropetal auxin transport8.10E-04
59GO:0006212: uracil catabolic process8.10E-04
60GO:0007584: response to nutrient8.10E-04
61GO:0002221: pattern recognition receptor signaling pathway8.10E-04
62GO:0080185: effector dependent induction by symbiont of host immune response8.10E-04
63GO:0015914: phospholipid transport8.10E-04
64GO:2000072: regulation of defense response to fungus, incompatible interaction8.10E-04
65GO:0019483: beta-alanine biosynthetic process8.10E-04
66GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine8.10E-04
67GO:0009620: response to fungus9.06E-04
68GO:0009682: induced systemic resistance9.70E-04
69GO:0052544: defense response by callose deposition in cell wall9.70E-04
70GO:0009414: response to water deprivation9.97E-04
71GO:0006979: response to oxidative stress1.08E-03
72GO:0012501: programmed cell death1.11E-03
73GO:0009651: response to salt stress1.18E-03
74GO:0010581: regulation of starch biosynthetic process1.31E-03
75GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.31E-03
76GO:0072661: protein targeting to plasma membrane1.31E-03
77GO:0006517: protein deglycosylation1.31E-03
78GO:0055074: calcium ion homeostasis1.31E-03
79GO:1900140: regulation of seedling development1.31E-03
80GO:0048281: inflorescence morphogenesis1.31E-03
81GO:0034605: cellular response to heat1.41E-03
82GO:0009969: xyloglucan biosynthetic process1.58E-03
83GO:0000162: tryptophan biosynthetic process1.76E-03
84GO:0043207: response to external biotic stimulus1.89E-03
85GO:0006515: misfolded or incompletely synthesized protein catabolic process1.89E-03
86GO:0009399: nitrogen fixation1.89E-03
87GO:0072583: clathrin-dependent endocytosis1.89E-03
88GO:0000187: activation of MAPK activity1.89E-03
89GO:0010148: transpiration1.89E-03
90GO:0034219: carbohydrate transmembrane transport1.89E-03
91GO:0006516: glycoprotein catabolic process1.89E-03
92GO:0015696: ammonium transport1.89E-03
93GO:0002239: response to oomycetes1.89E-03
94GO:0002679: respiratory burst involved in defense response1.89E-03
95GO:0009863: salicylic acid mediated signaling pathway1.95E-03
96GO:0006887: exocytosis2.19E-03
97GO:0048278: vesicle docking2.37E-03
98GO:0016998: cell wall macromolecule catabolic process2.37E-03
99GO:1902584: positive regulation of response to water deprivation2.54E-03
100GO:0072488: ammonium transmembrane transport2.54E-03
101GO:0010188: response to microbial phytotoxin2.54E-03
102GO:0010600: regulation of auxin biosynthetic process2.54E-03
103GO:0006542: glutamine biosynthetic process2.54E-03
104GO:0010107: potassium ion import2.54E-03
105GO:0010508: positive regulation of autophagy2.54E-03
106GO:0048830: adventitious root development2.54E-03
107GO:0009814: defense response, incompatible interaction2.59E-03
108GO:2000022: regulation of jasmonic acid mediated signaling pathway2.59E-03
109GO:0046283: anthocyanin-containing compound metabolic process3.25E-03
110GO:0000304: response to singlet oxygen3.25E-03
111GO:0031365: N-terminal protein amino acid modification3.25E-03
112GO:0009697: salicylic acid biosynthetic process3.25E-03
113GO:0010225: response to UV-C3.25E-03
114GO:0042391: regulation of membrane potential3.60E-03
115GO:0046323: glucose import3.88E-03
116GO:0002238: response to molecule of fungal origin4.02E-03
117GO:0060918: auxin transport4.02E-03
118GO:1900425: negative regulation of defense response to bacterium4.02E-03
119GO:0006623: protein targeting to vacuole4.48E-03
120GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response4.85E-03
121GO:0000911: cytokinesis by cell plate formation4.85E-03
122GO:2000067: regulation of root morphogenesis4.85E-03
123GO:0010555: response to mannitol4.85E-03
124GO:0009612: response to mechanical stimulus4.85E-03
125GO:0030163: protein catabolic process5.46E-03
126GO:0043090: amino acid import5.73E-03
127GO:0009610: response to symbiotic fungus5.73E-03
128GO:0009723: response to ethylene5.80E-03
129GO:0009409: response to cold6.31E-03
130GO:0009787: regulation of abscisic acid-activated signaling pathway6.65E-03
131GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline6.65E-03
132GO:0009819: drought recovery6.65E-03
133GO:0030162: regulation of proteolysis6.65E-03
134GO:1900150: regulation of defense response to fungus6.65E-03
135GO:0043068: positive regulation of programmed cell death6.65E-03
136GO:0001666: response to hypoxia6.94E-03
137GO:0016192: vesicle-mediated transport6.96E-03
138GO:0010204: defense response signaling pathway, resistance gene-independent7.64E-03
139GO:0007186: G-protein coupled receptor signaling pathway7.64E-03
140GO:0010497: plasmodesmata-mediated intercellular transport7.64E-03
141GO:0006075: (1->3)-beta-D-glucan biosynthetic process7.64E-03
142GO:2000031: regulation of salicylic acid mediated signaling pathway7.64E-03
143GO:0006906: vesicle fusion7.76E-03
144GO:0042128: nitrate assimilation7.76E-03
145GO:0006886: intracellular protein transport8.89E-03
146GO:0009817: defense response to fungus, incompatible interaction9.07E-03
147GO:0010311: lateral root formation9.54E-03
148GO:0009813: flavonoid biosynthetic process9.54E-03
149GO:2000280: regulation of root development9.74E-03
150GO:1900426: positive regulation of defense response to bacterium9.74E-03
151GO:0009407: toxin catabolic process1.00E-02
152GO:0048527: lateral root development1.05E-02
153GO:0010119: regulation of stomatal movement1.05E-02
154GO:0006995: cellular response to nitrogen starvation1.09E-02
155GO:0010215: cellulose microfibril organization1.09E-02
156GO:0009641: shade avoidance1.09E-02
157GO:0009870: defense response signaling pathway, resistance gene-dependent1.09E-02
158GO:0006032: chitin catabolic process1.09E-02
159GO:0016042: lipid catabolic process1.12E-02
160GO:0009867: jasmonic acid mediated signaling pathway1.15E-02
161GO:0009750: response to fructose1.20E-02
162GO:0009684: indoleacetic acid biosynthetic process1.20E-02
163GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process1.29E-02
164GO:0010105: negative regulation of ethylene-activated signaling pathway1.33E-02
165GO:0002213: defense response to insect1.33E-02
166GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.33E-02
167GO:0071365: cellular response to auxin stimulus1.33E-02
168GO:0015706: nitrate transport1.33E-02
169GO:0000266: mitochondrial fission1.33E-02
170GO:0042542: response to hydrogen peroxide1.43E-02
171GO:0006807: nitrogen compound metabolic process1.45E-02
172GO:0006508: proteolysis1.48E-02
173GO:0015031: protein transport1.56E-02
174GO:0002237: response to molecule of bacterial origin1.58E-02
175GO:0007165: signal transduction1.58E-02
176GO:0007034: vacuolar transport1.58E-02
177GO:0009636: response to toxic substance1.68E-02
178GO:0010167: response to nitrate1.71E-02
179GO:2000377: regulation of reactive oxygen species metabolic process1.99E-02
180GO:0006874: cellular calcium ion homeostasis2.14E-02
181GO:0010073: meristem maintenance2.14E-02
182GO:0030433: ubiquitin-dependent ERAD pathway2.44E-02
183GO:0071456: cellular response to hypoxia2.44E-02
184GO:0035428: hexose transmembrane transport2.44E-02
185GO:0071215: cellular response to abscisic acid stimulus2.60E-02
186GO:0006012: galactose metabolic process2.60E-02
187GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.67E-02
188GO:0010091: trichome branching2.76E-02
189GO:0010584: pollen exine formation2.76E-02
190GO:0044550: secondary metabolite biosynthetic process2.84E-02
191GO:0009624: response to nematode2.87E-02
192GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.92E-02
193GO:0042147: retrograde transport, endosome to Golgi2.92E-02
194GO:0018105: peptidyl-serine phosphorylation2.95E-02
195GO:0009742: brassinosteroid mediated signaling pathway3.04E-02
196GO:0000413: protein peptidyl-prolyl isomerization3.08E-02
197GO:0010051: xylem and phloem pattern formation3.08E-02
198GO:0010118: stomatal movement3.08E-02
199GO:0042631: cellular response to water deprivation3.08E-02
200GO:0010197: polar nucleus fusion3.25E-02
201GO:0008360: regulation of cell shape3.25E-02
202GO:0009646: response to absence of light3.42E-02
203GO:0010183: pollen tube guidance3.60E-02
204GO:0009851: auxin biosynthetic process3.60E-02
205GO:0009749: response to glucose3.60E-02
206GO:0006891: intra-Golgi vesicle-mediated transport3.78E-02
207GO:0002229: defense response to oomycetes3.78E-02
208GO:0016032: viral process3.96E-02
209GO:0006629: lipid metabolic process4.15E-02
210GO:0006904: vesicle docking involved in exocytosis4.52E-02
211GO:0009753: response to jasmonic acid4.52E-02
212GO:0051607: defense response to virus4.71E-02
213GO:0040008: regulation of growth4.71E-02
214GO:0009615: response to virus4.91E-02
RankGO TermAdjusted P value
1GO:0000224: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity0.00E+00
2GO:0015148: D-xylose transmembrane transporter activity0.00E+00
3GO:0015576: sorbitol transmembrane transporter activity0.00E+00
4GO:0033759: flavone synthase activity0.00E+00
5GO:0015370: solute:sodium symporter activity0.00E+00
6GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
7GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
8GO:0015575: mannitol transmembrane transporter activity0.00E+00
9GO:0005365: myo-inositol transmembrane transporter activity0.00E+00
10GO:0005212: structural constituent of eye lens0.00E+00
11GO:0015591: D-ribose transmembrane transporter activity0.00E+00
12GO:0003837: beta-ureidopropionase activity0.00E+00
13GO:0016301: kinase activity3.96E-10
14GO:0005516: calmodulin binding7.39E-08
15GO:0005524: ATP binding1.40E-07
16GO:0004674: protein serine/threonine kinase activity2.30E-07
17GO:0004012: phospholipid-translocating ATPase activity5.68E-06
18GO:0005388: calcium-transporting ATPase activity8.89E-05
19GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism8.89E-05
20GO:0004190: aspartic-type endopeptidase activity1.27E-04
21GO:0047631: ADP-ribose diphosphatase activity1.32E-04
22GO:0000210: NAD+ diphosphatase activity1.90E-04
23GO:0005509: calcium ion binding2.58E-04
24GO:0015168: glycerol transmembrane transporter activity3.73E-04
25GO:2001147: camalexin binding3.73E-04
26GO:0080042: ADP-glucose pyrophosphohydrolase activity3.73E-04
27GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity3.73E-04
28GO:0031127: alpha-(1,2)-fucosyltransferase activity3.73E-04
29GO:0032050: clathrin heavy chain binding3.73E-04
30GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity3.73E-04
31GO:2001227: quercitrin binding3.73E-04
32GO:1901149: salicylic acid binding3.73E-04
33GO:0004348: glucosylceramidase activity3.73E-04
34GO:0015085: calcium ion transmembrane transporter activity3.73E-04
35GO:0004714: transmembrane receptor protein tyrosine kinase activity4.18E-04
36GO:0004675: transmembrane receptor protein serine/threonine kinase activity4.32E-04
37GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity5.11E-04
38GO:0004630: phospholipase D activity5.11E-04
39GO:0017110: nucleoside-diphosphatase activity8.10E-04
40GO:0080041: ADP-ribose pyrophosphohydrolase activity8.10E-04
41GO:0004806: triglyceride lipase activity1.15E-03
42GO:0004683: calmodulin-dependent protein kinase activity1.15E-03
43GO:0016595: glutamate binding1.31E-03
44GO:0004049: anthranilate synthase activity1.31E-03
45GO:0031683: G-protein beta/gamma-subunit complex binding1.31E-03
46GO:0001664: G-protein coupled receptor binding1.31E-03
47GO:0005515: protein binding1.35E-03
48GO:0030553: cGMP binding1.58E-03
49GO:0030552: cAMP binding1.58E-03
50GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.76E-03
51GO:0005354: galactose transmembrane transporter activity1.89E-03
52GO:0035529: NADH pyrophosphatase activity1.89E-03
53GO:0005216: ion channel activity2.16E-03
54GO:0033612: receptor serine/threonine kinase binding2.37E-03
55GO:0005484: SNAP receptor activity2.43E-03
56GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen2.44E-03
57GO:0015204: urea transmembrane transporter activity2.54E-03
58GO:0043495: protein anchor2.54E-03
59GO:0005506: iron ion binding3.16E-03
60GO:0015145: monosaccharide transmembrane transporter activity3.25E-03
61GO:0005546: phosphatidylinositol-4,5-bisphosphate binding3.25E-03
62GO:0045431: flavonol synthase activity3.25E-03
63GO:0004356: glutamate-ammonia ligase activity3.25E-03
64GO:0030551: cyclic nucleotide binding3.60E-03
65GO:0005249: voltage-gated potassium channel activity3.60E-03
66GO:0016298: lipase activity3.72E-03
67GO:0008519: ammonium transmembrane transporter activity4.02E-03
68GO:0031625: ubiquitin protein ligase binding4.05E-03
69GO:0005355: glucose transmembrane transporter activity4.18E-03
70GO:0004656: procollagen-proline 4-dioxygenase activity4.85E-03
71GO:0019825: oxygen binding4.93E-03
72GO:0008320: protein transmembrane transporter activity5.73E-03
73GO:0043295: glutathione binding5.73E-03
74GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity5.73E-03
75GO:0008235: metalloexopeptidase activity5.73E-03
76GO:0046872: metal ion binding5.75E-03
77GO:0004034: aldose 1-epimerase activity6.65E-03
78GO:0004708: MAP kinase kinase activity6.65E-03
79GO:0003843: 1,3-beta-D-glucan synthase activity7.64E-03
80GO:0005267: potassium channel activity7.64E-03
81GO:0009931: calcium-dependent protein serine/threonine kinase activity7.76E-03
82GO:0030247: polysaccharide binding8.18E-03
83GO:0008417: fucosyltransferase activity8.66E-03
84GO:0015112: nitrate transmembrane transporter activity9.74E-03
85GO:0004713: protein tyrosine kinase activity1.09E-02
86GO:0004568: chitinase activity1.09E-02
87GO:0004177: aminopeptidase activity1.20E-02
88GO:0005543: phospholipid binding1.20E-02
89GO:0000149: SNARE binding1.26E-02
90GO:0030246: carbohydrate binding1.41E-02
91GO:0004364: glutathione transferase activity1.43E-02
92GO:0031072: heat shock protein binding1.45E-02
93GO:0005262: calcium channel activity1.45E-02
94GO:0042626: ATPase activity, coupled to transmembrane movement of substances1.52E-02
95GO:0015293: symporter activity1.68E-02
96GO:0004970: ionotropic glutamate receptor activity1.71E-02
97GO:0008061: chitin binding1.71E-02
98GO:0003712: transcription cofactor activity1.71E-02
99GO:0051119: sugar transmembrane transporter activity1.71E-02
100GO:0005217: intracellular ligand-gated ion channel activity1.71E-02
101GO:0051287: NAD binding1.81E-02
102GO:0000287: magnesium ion binding1.91E-02
103GO:0003954: NADH dehydrogenase activity1.99E-02
104GO:0031418: L-ascorbic acid binding1.99E-02
105GO:0043565: sequence-specific DNA binding2.12E-02
106GO:0015171: amino acid transmembrane transporter activity2.23E-02
107GO:0020037: heme binding2.35E-02
108GO:0008810: cellulase activity2.60E-02
109GO:0061630: ubiquitin protein ligase activity2.73E-02
110GO:0051082: unfolded protein binding2.87E-02
111GO:0008080: N-acetyltransferase activity3.25E-02
112GO:0004871: signal transducer activity3.39E-02
113GO:0042803: protein homodimerization activity3.39E-02
114GO:0016853: isomerase activity3.42E-02
115GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen3.68E-02
116GO:0003924: GTPase activity4.15E-02
117GO:0015144: carbohydrate transmembrane transporter activity4.28E-02
118GO:0016722: oxidoreductase activity, oxidizing metal ions4.52E-02
119GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity4.52E-02
120GO:0005507: copper ion binding4.58E-02
121GO:0004842: ubiquitin-protein transferase activity4.79E-02
122GO:0005351: sugar:proton symporter activity4.82E-02
123GO:0051213: dioxygenase activity4.91E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane1.14E-19
2GO:0016021: integral component of membrane2.13E-11
3GO:0005887: integral component of plasma membrane8.09E-05
4GO:0009506: plasmodesma1.38E-04
5GO:0045252: oxoglutarate dehydrogenase complex3.73E-04
6GO:0016020: membrane4.23E-04
7GO:0009504: cell plate5.38E-04
8GO:0031304: intrinsic component of mitochondrial inner membrane8.10E-04
9GO:0005950: anthranilate synthase complex8.10E-04
10GO:0005901: caveola8.10E-04
11GO:0017119: Golgi transport complex8.43E-04
12GO:0005789: endoplasmic reticulum membrane1.01E-03
13GO:0070062: extracellular exosome1.89E-03
14GO:0030658: transport vesicle membrane1.89E-03
15GO:0005775: vacuolar lumen1.89E-03
16GO:0005618: cell wall1.92E-03
17GO:0031902: late endosome membrane2.19E-03
18GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane5.73E-03
19GO:0032580: Golgi cisterna membrane5.81E-03
20GO:0005802: trans-Golgi network6.22E-03
21GO:0000148: 1,3-beta-D-glucan synthase complex7.64E-03
22GO:0005774: vacuolar membrane8.14E-03
23GO:0019005: SCF ubiquitin ligase complex9.07E-03
24GO:0030665: clathrin-coated vesicle membrane9.74E-03
25GO:0005783: endoplasmic reticulum9.80E-03
26GO:0005794: Golgi apparatus9.86E-03
27GO:0030125: clathrin vesicle coat1.09E-02
28GO:0005829: cytosol1.31E-02
29GO:0031201: SNARE complex1.37E-02
30GO:0031012: extracellular matrix1.45E-02
31GO:0046658: anchored component of plasma membrane1.60E-02
32GO:0031225: anchored component of membrane1.81E-02
33GO:0005737: cytoplasm2.10E-02
34GO:0019898: extrinsic component of membrane3.60E-02
35GO:0000145: exocyst3.96E-02
36GO:0009505: plant-type cell wall4.09E-02
37GO:0071944: cell periphery4.14E-02
38GO:0000139: Golgi membrane4.63E-02
39GO:0005773: vacuole4.92E-02
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Gene type



Gene DE type