Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G03260

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1903798: regulation of production of miRNAs involved in gene silencing by miRNA0.00E+00
2GO:0036258: multivesicular body assembly0.00E+00
3GO:0090421: embryonic meristem initiation3.22E-06
4GO:1900036: positive regulation of cellular response to heat3.22E-06
5GO:0046740: transport of virus in host, cell to cell8.96E-06
6GO:2000072: regulation of defense response to fungus, incompatible interaction8.96E-06
7GO:0043044: ATP-dependent chromatin remodeling1.68E-05
8GO:0070676: intralumenal vesicle formation2.64E-05
9GO:0010071: root meristem specification2.64E-05
10GO:0010199: organ boundary specification between lateral organs and the meristem7.81E-05
11GO:0010050: vegetative phase change9.36E-05
12GO:0010078: maintenance of root meristem identity1.10E-04
13GO:0010492: maintenance of shoot apical meristem identity1.10E-04
14GO:0040029: regulation of gene expression, epigenetic1.10E-04
15GO:0009880: embryonic pattern specification1.27E-04
16GO:0001708: cell fate specification1.45E-04
17GO:0009793: embryo development ending in seed dormancy2.30E-04
18GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process2.43E-04
19GO:0006829: zinc II ion transport2.43E-04
20GO:0010187: negative regulation of seed germination3.29E-04
21GO:0080022: primary root development4.93E-04
22GO:0055072: iron ion homeostasis5.68E-04
23GO:0030163: protein catabolic process6.45E-04
24GO:0009867: jasmonic acid mediated signaling pathway1.04E-03
25GO:0045087: innate immune response1.04E-03
26GO:0030001: metal ion transport1.13E-03
27GO:0000209: protein polyubiquitination1.25E-03
28GO:0031347: regulation of defense response1.38E-03
29GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.38E-03
30GO:0006417: regulation of translation1.58E-03
31GO:0016569: covalent chromatin modification1.80E-03
32GO:0007165: signal transduction2.24E-03
33GO:0006470: protein dephosphorylation2.95E-03
34GO:0010468: regulation of gene expression3.04E-03
35GO:0016567: protein ubiquitination3.25E-03
36GO:0009408: response to heat5.48E-03
37GO:0009734: auxin-activated signaling pathway6.95E-03
38GO:0055085: transmembrane transport9.65E-03
39GO:0006511: ubiquitin-dependent protein catabolic process1.01E-02
40GO:0015031: protein transport1.59E-02
41GO:0007275: multicellular organism development2.17E-02
42GO:0050832: defense response to fungus2.92E-02
43GO:0006952: defense response4.56E-02
RankGO TermAdjusted P value
1GO:0032549: ribonucleoside binding1.68E-05
2GO:0001055: RNA polymerase II activity1.63E-04
3GO:0031624: ubiquitin conjugating enzyme binding2.64E-04
4GO:0043130: ubiquitin binding3.29E-04
5GO:0008094: DNA-dependent ATPase activity3.74E-04
6GO:0019706: protein-cysteine S-palmitoyltransferase activity3.74E-04
7GO:0046873: metal ion transmembrane transporter activity5.18E-04
8GO:0035091: phosphatidylinositol binding1.28E-03
9GO:0046872: metal ion binding1.30E-03
10GO:0005515: protein binding1.46E-03
11GO:0003899: DNA-directed 5'-3' RNA polymerase activity1.48E-03
12GO:0003729: mRNA binding1.61E-03
13GO:0016874: ligase activity1.80E-03
14GO:0004386: helicase activity1.98E-03
15GO:0046982: protein heterodimerization activity3.58E-03
16GO:0003682: chromatin binding3.77E-03
17GO:0061630: ubiquitin protein ligase activity4.35E-03
18GO:0042803: protein homodimerization activity4.90E-03
19GO:0004722: protein serine/threonine phosphatase activity5.06E-03
20GO:0004842: ubiquitin-protein transferase activity1.69E-02
21GO:0008270: zinc ion binding2.72E-02
RankGO TermAdjusted P value
1GO:0016591: DNA-directed RNA polymerase II, holoenzyme4.99E-05
2GO:0000813: ESCRT I complex4.99E-05
3GO:0005665: DNA-directed RNA polymerase II, core complex2.22E-04
4GO:0000151: ubiquitin ligase complex8.92E-04
5GO:0019005: SCF ubiquitin ligase complex8.92E-04
6GO:0031902: late endosome membrane1.16E-03
7GO:0005634: nucleus5.90E-03
8GO:0005829: cytosol1.38E-02
9GO:0009536: plastid1.55E-02
10GO:0005886: plasma membrane2.89E-02
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Gene type



Gene DE type