Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G03030

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0016236: macroautophagy0.00E+00
2GO:0009991: response to extracellular stimulus0.00E+00
3GO:0010111: glyoxysome organization0.00E+00
4GO:1900103: positive regulation of endoplasmic reticulum unfolded protein response0.00E+00
5GO:0071806: protein transmembrane transport5.03E-05
6GO:0010201: response to continuous far red light stimulus by the high-irradiance response system5.03E-05
7GO:1903648: positive regulation of chlorophyll catabolic process5.03E-05
8GO:0048482: plant ovule morphogenesis5.03E-05
9GO:0030242: pexophagy5.03E-05
10GO:0000303: response to superoxide5.03E-05
11GO:0080136: priming of cellular response to stress5.03E-05
12GO:0034214: protein hexamerization5.03E-05
13GO:0006970: response to osmotic stress6.06E-05
14GO:0010200: response to chitin8.36E-05
15GO:0019395: fatty acid oxidation1.23E-04
16GO:0046621: negative regulation of organ growth2.11E-04
17GO:0006623: protein targeting to vacuole3.01E-04
18GO:0070676: intralumenal vesicle formation3.09E-04
19GO:0006809: nitric oxide biosynthetic process3.09E-04
20GO:2000038: regulation of stomatal complex development4.15E-04
21GO:0045324: late endosome to vacuole transport4.15E-04
22GO:0006656: phosphatidylcholine biosynthetic process5.26E-04
23GO:0006950: response to stress5.46E-04
24GO:0048317: seed morphogenesis6.44E-04
25GO:0009723: response to ethylene7.01E-04
26GO:0009867: jasmonic acid mediated signaling pathway7.56E-04
27GO:2000037: regulation of stomatal complex patterning7.68E-04
28GO:0071470: cellular response to osmotic stress7.68E-04
29GO:0000911: cytokinesis by cell plate formation7.68E-04
30GO:1900057: positive regulation of leaf senescence8.97E-04
31GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway8.97E-04
32GO:0009610: response to symbiotic fungus8.97E-04
33GO:0032875: regulation of DNA endoreduplication1.03E-03
34GO:0009787: regulation of abscisic acid-activated signaling pathway1.03E-03
35GO:0010120: camalexin biosynthetic process1.17E-03
36GO:0030968: endoplasmic reticulum unfolded protein response1.17E-03
37GO:0006979: response to oxidative stress1.18E-03
38GO:2000280: regulation of root development1.47E-03
39GO:0019538: protein metabolic process1.63E-03
40GO:0015031: protein transport1.67E-03
41GO:0072593: reactive oxygen species metabolic process1.79E-03
42GO:0009698: phenylpropanoid metabolic process1.79E-03
43GO:0012501: programmed cell death1.96E-03
44GO:0006626: protein targeting to mitochondrion2.14E-03
45GO:0010229: inflorescence development2.14E-03
46GO:0010102: lateral root morphogenesis2.14E-03
47GO:0007034: vacuolar transport2.32E-03
48GO:0009887: animal organ morphogenesis2.32E-03
49GO:0009738: abscisic acid-activated signaling pathway2.43E-03
50GO:0009825: multidimensional cell growth2.50E-03
51GO:0009790: embryo development2.61E-03
52GO:2000377: regulation of reactive oxygen species metabolic process2.88E-03
53GO:0030150: protein import into mitochondrial matrix2.88E-03
54GO:0009695: jasmonic acid biosynthetic process3.08E-03
55GO:0031408: oxylipin biosynthetic process3.29E-03
56GO:0003333: amino acid transmembrane transport3.29E-03
57GO:0051260: protein homooligomerization3.29E-03
58GO:0009814: defense response, incompatible interaction3.50E-03
59GO:0030433: ubiquitin-dependent ERAD pathway3.50E-03
60GO:0031348: negative regulation of defense response3.50E-03
61GO:0009737: response to abscisic acid3.66E-03
62GO:0009306: protein secretion3.93E-03
63GO:0070417: cellular response to cold4.15E-03
64GO:0009789: positive regulation of abscisic acid-activated signaling pathway4.15E-03
65GO:0010197: polar nucleus fusion4.60E-03
66GO:0071472: cellular response to salt stress4.60E-03
67GO:0010154: fruit development4.60E-03
68GO:0010183: pollen tube guidance5.07E-03
69GO:0000302: response to reactive oxygen species5.32E-03
70GO:0006635: fatty acid beta-oxidation5.32E-03
71GO:0010193: response to ozone5.32E-03
72GO:0010583: response to cyclopentenone5.56E-03
73GO:0016032: viral process5.56E-03
74GO:0006464: cellular protein modification process6.07E-03
75GO:0006914: autophagy6.07E-03
76GO:0006904: vesicle docking involved in exocytosis6.33E-03
77GO:0009788: negative regulation of abscisic acid-activated signaling pathway7.12E-03
78GO:0009816: defense response to bacterium, incompatible interaction7.12E-03
79GO:0048481: plant ovule development8.24E-03
80GO:0009817: defense response to fungus, incompatible interaction8.24E-03
81GO:0048364: root development9.01E-03
82GO:0048527: lateral root development9.12E-03
83GO:0042542: response to hydrogen peroxide1.13E-02
84GO:0009846: pollen germination1.37E-02
85GO:0042538: hyperosmotic salinity response1.37E-02
86GO:0006813: potassium ion transport1.44E-02
87GO:0010224: response to UV-B1.47E-02
88GO:0009555: pollen development1.54E-02
89GO:0007165: signal transduction1.57E-02
90GO:0006351: transcription, DNA-templated1.67E-02
91GO:0009626: plant-type hypersensitive response1.69E-02
92GO:0009620: response to fungus1.73E-02
93GO:0006396: RNA processing1.88E-02
94GO:0009058: biosynthetic process2.24E-02
95GO:0009845: seed germination2.29E-02
96GO:0050832: defense response to fungus2.45E-02
97GO:0016567: protein ubiquitination2.53E-02
98GO:0040008: regulation of growth2.63E-02
99GO:0010150: leaf senescence2.72E-02
100GO:0009651: response to salt stress2.86E-02
101GO:0006470: protein dephosphorylation2.99E-02
102GO:0010468: regulation of gene expression3.08E-02
103GO:0006355: regulation of transcription, DNA-templated4.14E-02
104GO:0016192: vesicle-mediated transport4.48E-02
RankGO TermAdjusted P value
1GO:0033550: MAP kinase tyrosine phosphatase activity0.00E+00
2GO:0004105: choline-phosphate cytidylyltransferase activity5.03E-05
3GO:0003958: NADPH-hemoprotein reductase activity1.23E-04
4GO:0003988: acetyl-CoA C-acyltransferase activity1.23E-04
5GO:0000975: regulatory region DNA binding2.11E-04
6GO:0008113: peptide-methionine (S)-S-oxide reductase activity7.68E-04
7GO:0003950: NAD+ ADP-ribosyltransferase activity7.68E-04
8GO:0004869: cysteine-type endopeptidase inhibitor activity1.03E-03
9GO:0015174: basic amino acid transmembrane transporter activity1.47E-03
10GO:0015266: protein channel activity2.14E-03
11GO:0004867: serine-type endopeptidase inhibitor activity2.50E-03
12GO:0004725: protein tyrosine phosphatase activity2.69E-03
13GO:0043130: ubiquitin binding2.88E-03
14GO:0004707: MAP kinase activity3.29E-03
15GO:0005249: voltage-gated potassium channel activity4.37E-03
16GO:0010181: FMN binding4.83E-03
17GO:0042803: protein homodimerization activity7.34E-03
18GO:0008757: S-adenosylmethionine-dependent methyltransferase activity7.96E-03
19GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity8.24E-03
20GO:0005096: GTPase activator activity8.53E-03
21GO:0004712: protein serine/threonine/tyrosine kinase activity1.03E-02
22GO:0050661: NADP binding1.07E-02
23GO:0043621: protein self-association1.23E-02
24GO:0015171: amino acid transmembrane transporter activity1.54E-02
25GO:0005515: protein binding1.62E-02
26GO:0005516: calmodulin binding2.32E-02
27GO:0008565: protein transporter activity2.46E-02
28GO:0008168: methyltransferase activity3.61E-02
29GO:0046982: protein heterodimerization activity3.66E-02
30GO:0050660: flavin adenine dinucleotide binding4.12E-02
31GO:0008233: peptidase activity4.27E-02
32GO:0004672: protein kinase activity4.56E-02
RankGO TermAdjusted P value
1GO:0071561: nucleus-vacuole junction0.00E+00
2GO:0034271: phosphatidylinositol 3-kinase complex, class III, type I5.03E-05
3GO:0034272: phosphatidylinositol 3-kinase complex, class III, type II5.03E-05
4GO:0005770: late endosome2.60E-04
5GO:0008076: voltage-gated potassium channel complex3.09E-04
6GO:0000164: protein phosphatase type 1 complex5.26E-04
7GO:0005771: multivesicular body6.44E-04
8GO:0080008: Cul4-RING E3 ubiquitin ligase complex6.56E-04
9GO:0000815: ESCRT III complex7.68E-04
10GO:0016363: nuclear matrix7.68E-04
11GO:0031305: integral component of mitochondrial inner membrane1.03E-03
12GO:0009514: glyoxysome1.17E-03
13GO:0030665: clathrin-coated vesicle membrane1.47E-03
14GO:0005834: heterotrimeric G-protein complex1.59E-03
15GO:0017119: Golgi transport complex1.63E-03
16GO:0048471: perinuclear region of cytoplasm1.79E-03
17GO:0009574: preprophase band2.14E-03
18GO:0005744: mitochondrial inner membrane presequence translocase complex3.93E-03
19GO:0030136: clathrin-coated vesicle4.15E-03
20GO:0030529: intracellular ribonucleoprotein complex6.85E-03
21GO:0005643: nuclear pore8.24E-03
22GO:0005789: endoplasmic reticulum membrane1.06E-02
23GO:0031902: late endosome membrane1.10E-02
24GO:0010008: endosome membrane1.65E-02
25GO:0009706: chloroplast inner membrane1.84E-02
26GO:0005783: endoplasmic reticulum2.19E-02
27GO:0009524: phragmoplast2.24E-02
28GO:0005802: trans-Golgi network2.47E-02
29GO:0005737: cytoplasm2.48E-02
30GO:0009705: plant-type vacuole membrane2.72E-02
31GO:0005615: extracellular space2.95E-02
32GO:0005634: nucleus3.78E-02
33GO:0009941: chloroplast envelope4.33E-02
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Gene type



Gene DE type