GO Enrichment Analysis of Co-expressed Genes with
AT4G02640
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1900490: positive regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity | 0.00E+00 |
| 2 | GO:0019303: D-ribose catabolic process | 0.00E+00 |
| 3 | GO:0031338: regulation of vesicle fusion | 1.57E-05 |
| 4 | GO:0090421: embryonic meristem initiation | 1.57E-05 |
| 5 | GO:0048482: plant ovule morphogenesis | 1.57E-05 |
| 6 | GO:0000719: photoreactive repair | 4.12E-05 |
| 7 | GO:0055078: sodium ion homeostasis | 4.12E-05 |
| 8 | GO:0010288: response to lead ion | 7.34E-05 |
| 9 | GO:0007032: endosome organization | 7.34E-05 |
| 10 | GO:0090630: activation of GTPase activity | 7.34E-05 |
| 11 | GO:0046621: negative regulation of organ growth | 7.34E-05 |
| 12 | GO:0045723: positive regulation of fatty acid biosynthetic process | 1.53E-04 |
| 13 | GO:0043097: pyrimidine nucleoside salvage | 1.98E-04 |
| 14 | GO:0048317: seed morphogenesis | 2.47E-04 |
| 15 | GO:0006206: pyrimidine nucleobase metabolic process | 2.47E-04 |
| 16 | GO:0000911: cytokinesis by cell plate formation | 2.97E-04 |
| 17 | GO:0046835: carbohydrate phosphorylation | 2.97E-04 |
| 18 | GO:0032875: regulation of DNA endoreduplication | 4.04E-04 |
| 19 | GO:0055075: potassium ion homeostasis | 4.04E-04 |
| 20 | GO:0009880: embryonic pattern specification | 4.60E-04 |
| 21 | GO:0009821: alkaloid biosynthetic process | 5.18E-04 |
| 22 | GO:0001708: cell fate specification | 5.18E-04 |
| 23 | GO:0010345: suberin biosynthetic process | 5.18E-04 |
| 24 | GO:0048268: clathrin coat assembly | 5.76E-04 |
| 25 | GO:0031627: telomeric loop formation | 6.38E-04 |
| 26 | GO:0006470: protein dephosphorylation | 8.52E-04 |
| 27 | GO:0010143: cutin biosynthetic process | 8.97E-04 |
| 28 | GO:0007033: vacuole organization | 9.64E-04 |
| 29 | GO:0010053: root epidermal cell differentiation | 9.64E-04 |
| 30 | GO:0009825: multidimensional cell growth | 9.64E-04 |
| 31 | GO:0010025: wax biosynthetic process | 1.03E-03 |
| 32 | GO:0009116: nucleoside metabolic process | 1.10E-03 |
| 33 | GO:0008299: isoprenoid biosynthetic process | 1.18E-03 |
| 34 | GO:0030433: ubiquitin-dependent ERAD pathway | 1.33E-03 |
| 35 | GO:0009411: response to UV | 1.40E-03 |
| 36 | GO:0010091: trichome branching | 1.48E-03 |
| 37 | GO:0009306: protein secretion | 1.48E-03 |
| 38 | GO:0042335: cuticle development | 1.65E-03 |
| 39 | GO:0009751: response to salicylic acid | 2.00E-03 |
| 40 | GO:0006904: vesicle docking involved in exocytosis | 2.36E-03 |
| 41 | GO:0001666: response to hypoxia | 2.55E-03 |
| 42 | GO:0009873: ethylene-activated signaling pathway | 2.61E-03 |
| 43 | GO:0006950: response to stress | 2.84E-03 |
| 44 | GO:0006897: endocytosis | 4.02E-03 |
| 45 | GO:0009058: biosynthetic process | 8.06E-03 |
| 46 | GO:0040008: regulation of growth | 9.41E-03 |
| 47 | GO:0009739: response to gibberellin | 1.05E-02 |
| 48 | GO:0010468: regulation of gene expression | 1.10E-02 |
| 49 | GO:0006468: protein phosphorylation | 1.27E-02 |
| 50 | GO:0007049: cell cycle | 1.43E-02 |
| 51 | GO:0009723: response to ethylene | 1.47E-02 |
| 52 | GO:0048366: leaf development | 1.49E-02 |
| 53 | GO:0007165: signal transduction | 1.50E-02 |
| 54 | GO:0009737: response to abscisic acid | 1.54E-02 |
| 55 | GO:0016192: vesicle-mediated transport | 1.60E-02 |
| 56 | GO:0016310: phosphorylation | 1.77E-02 |
| 57 | GO:0006886: intracellular protein transport | 1.79E-02 |
| 58 | GO:0006869: lipid transport | 1.87E-02 |
| 59 | GO:0006281: DNA repair | 2.03E-02 |
| 60 | GO:0009753: response to jasmonic acid | 2.14E-02 |
| 61 | GO:0009908: flower development | 2.85E-02 |
| 62 | GO:0035556: intracellular signal transduction | 3.18E-02 |
| 63 | GO:0009414: response to water deprivation | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016301: kinase activity | 1.06E-05 |
| 2 | GO:0008301: DNA binding, bending | 1.57E-05 |
| 3 | GO:0032791: lead ion binding | 4.12E-05 |
| 4 | GO:0005096: GTPase activator activity | 1.45E-04 |
| 5 | GO:0000062: fatty-acyl-CoA binding | 1.53E-04 |
| 6 | GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway | 1.53E-04 |
| 7 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 1.95E-04 |
| 8 | GO:0017137: Rab GTPase binding | 1.98E-04 |
| 9 | GO:0005524: ATP binding | 2.93E-04 |
| 10 | GO:0004849: uridine kinase activity | 2.97E-04 |
| 11 | GO:0004747: ribokinase activity | 2.97E-04 |
| 12 | GO:0042162: telomeric DNA binding | 3.49E-04 |
| 13 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 5.18E-04 |
| 14 | GO:0031490: chromatin DNA binding | 5.76E-04 |
| 15 | GO:0005545: 1-phosphatidylinositol binding | 6.38E-04 |
| 16 | GO:0005515: protein binding | 6.45E-04 |
| 17 | GO:0003691: double-stranded telomeric DNA binding | 7.00E-04 |
| 18 | GO:0004725: protein tyrosine phosphatase activity | 1.03E-03 |
| 19 | GO:0043130: ubiquitin binding | 1.10E-03 |
| 20 | GO:0004707: MAP kinase activity | 1.25E-03 |
| 21 | GO:0003713: transcription coactivator activity | 1.73E-03 |
| 22 | GO:0030276: clathrin binding | 1.73E-03 |
| 23 | GO:0016853: isomerase activity | 1.82E-03 |
| 24 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 2.36E-03 |
| 25 | GO:0051213: dioxygenase activity | 2.55E-03 |
| 26 | GO:0004222: metalloendopeptidase activity | 3.25E-03 |
| 27 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 3.58E-03 |
| 28 | GO:0004386: helicase activity | 7.06E-03 |
| 29 | GO:0004672: protein kinase activity | 1.06E-02 |
| 30 | GO:0046982: protein heterodimerization activity | 1.31E-02 |
| 31 | GO:0004722: protein serine/threonine phosphatase activity | 1.87E-02 |
| 32 | GO:0003924: GTPase activity | 2.03E-02 |
| 33 | GO:0008289: lipid binding | 2.57E-02 |
| 34 | GO:0046872: metal ion binding | 2.78E-02 |
| 35 | GO:0004674: protein serine/threonine kinase activity | 3.56E-02 |
| 36 | GO:0005516: calmodulin binding | 4.09E-02 |
| 37 | GO:0005525: GTP binding | 4.36E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0030136: clathrin-coated vesicle | 4.41E-05 |
| 2 | GO:0042646: plastid nucleoid | 1.11E-04 |
| 3 | GO:0032585: multivesicular body membrane | 1.11E-04 |
| 4 | GO:0005771: multivesicular body | 2.47E-04 |
| 5 | GO:0009514: glyoxysome | 4.60E-04 |
| 6 | GO:0000783: nuclear telomere cap complex | 4.60E-04 |
| 7 | GO:0030176: integral component of endoplasmic reticulum membrane | 9.64E-04 |
| 8 | GO:0005905: clathrin-coated pit | 1.25E-03 |
| 9 | GO:0005778: peroxisomal membrane | 2.36E-03 |
| 10 | GO:0005886: plasma membrane | 2.50E-03 |
| 11 | GO:0000786: nucleosome | 3.47E-03 |
| 12 | GO:0012505: endomembrane system | 6.51E-03 |
| 13 | GO:0005737: cytoplasm | 3.32E-02 |
| 14 | GO:0005794: Golgi apparatus | 3.65E-02 |
| 15 | GO:0005634: nucleus | 4.36E-02 |
| 16 | GO:0005622: intracellular | 4.61E-02 |