co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G02570

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009991: response to extracellular stimulus	0.00E+00
2	GO:0080169: cellular response to boron-containing substance deprivation	0.00E+00
3	GO:0032780: negative regulation of ATPase activity	0.00E+00
4	GO:0010111: glyoxysome organization	0.00E+00
5	GO:0051603: proteolysis involved in cellular protein catabolic process	3.70E-06
6	GO:0006511: ubiquitin-dependent protein catabolic process	7.62E-06
7	GO:0035344: hypoxanthine transport	5.03E-05
8	GO:0098721: uracil import across plasma membrane	5.03E-05
9	GO:0006144: purine nucleobase metabolic process	5.03E-05
10	GO:0098702: adenine import across plasma membrane	5.03E-05
11	GO:0048455: stamen formation	5.03E-05
12	GO:0046167: glycerol-3-phosphate biosynthetic process	5.03E-05
13	GO:0098710: guanine import across plasma membrane	5.03E-05
14	GO:0006805: xenobiotic metabolic process	5.03E-05
15	GO:0019628: urate catabolic process	5.03E-05
16	GO:0000303: response to superoxide	5.03E-05
17	GO:0080173: male-female gamete recognition during double fertilization	5.03E-05
18	GO:0006481: C-terminal protein methylation	5.03E-05
19	GO:0051788: response to misfolded protein	1.23E-04
20	GO:1902000: homogentisate catabolic process	1.23E-04
21	GO:0019395: fatty acid oxidation	1.23E-04
22	GO:0031648: protein destabilization	1.23E-04
23	GO:0006641: triglyceride metabolic process	1.23E-04
24	GO:0019521: D-gluconate metabolic process	1.23E-04
25	GO:0019374: galactolipid metabolic process	1.23E-04
26	GO:0030433: ubiquitin-dependent ERAD pathway	1.70E-04
27	GO:0031348: negative regulation of defense response	1.70E-04
28	GO:0019563: glycerol catabolic process	2.11E-04
29	GO:0010359: regulation of anion channel activity	2.11E-04
30	GO:0043617: cellular response to sucrose starvation	2.11E-04
31	GO:0009072: aromatic amino acid family metabolic process	2.11E-04
32	GO:0006072: glycerol-3-phosphate metabolic process	3.09E-04
33	GO:0006809: nitric oxide biosynthetic process	3.09E-04
34	GO:0006635: fatty acid beta-oxidation	3.23E-04
35	GO:0006464: cellular protein modification process	3.91E-04
36	GO:0042991: transcription factor import into nucleus	4.15E-04
37	GO:0010188: response to microbial phytotoxin	4.15E-04
38	GO:0006878: cellular copper ion homeostasis	4.15E-04
39	GO:0010363: regulation of plant-type hypersensitive response	4.15E-04
40	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	4.92E-04
41	GO:1902456: regulation of stomatal opening	6.44E-04
42	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	6.44E-04
43	GO:0006751: glutathione catabolic process	6.44E-04
44	GO:0043248: proteasome assembly	6.44E-04
45	GO:0009723: response to ethylene	7.01E-04
46	GO:0009867: jasmonic acid mediated signaling pathway	7.56E-04
47	GO:0010038: response to metal ion	8.97E-04
48	GO:0006955: immune response	8.97E-04
49	GO:0048528: post-embryonic root development	8.97E-04
50	GO:0009744: response to sucrose	9.61E-04
51	GO:0006102: isocitrate metabolic process	1.03E-03
52	GO:0006644: phospholipid metabolic process	1.03E-03
53	GO:0030968: endoplasmic reticulum unfolded protein response	1.17E-03
54	GO:0042538: hyperosmotic salinity response	1.19E-03
55	GO:0006098: pentose-phosphate shunt	1.32E-03
56	GO:2000280: regulation of root development	1.47E-03
57	GO:0009873: ethylene-activated signaling pathway	1.70E-03
58	GO:0010072: primary shoot apical meristem specification	1.79E-03
59	GO:0072593: reactive oxygen species metabolic process	1.79E-03
60	GO:0012501: programmed cell death	1.96E-03
61	GO:0010102: lateral root morphogenesis	2.14E-03
62	GO:0055046: microgametogenesis	2.14E-03
63	GO:0046686: response to cadmium ion	2.27E-03
64	GO:0007034: vacuolar transport	2.32E-03
65	GO:0009887: animal organ morphogenesis	2.32E-03
66	GO:0002237: response to molecule of bacterial origin	2.32E-03
67	GO:0007031: peroxisome organization	2.50E-03
68	GO:2000377: regulation of reactive oxygen species metabolic process	2.88E-03
69	GO:0010150: leaf senescence	3.07E-03
70	GO:0009695: jasmonic acid biosynthetic process	3.08E-03
71	GO:0031408: oxylipin biosynthetic process	3.29E-03
72	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.43E-03
73	GO:0009561: megagametogenesis	3.93E-03
74	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	4.15E-03
75	GO:0010154: fruit development	4.60E-03
76	GO:0009646: response to absence of light	4.83E-03
77	GO:0048825: cotyledon development	5.07E-03
78	GO:0010193: response to ozone	5.32E-03
79	GO:0071554: cell wall organization or biogenesis	5.32E-03
80	GO:0010583: response to cyclopentenone	5.56E-03
81	GO:0016032: viral process	5.56E-03
82	GO:0048366: leaf development	5.56E-03
83	GO:0030163: protein catabolic process	5.81E-03
84	GO:0046777: protein autophosphorylation	6.26E-03
85	GO:0010029: regulation of seed germination	7.12E-03
86	GO:0009816: defense response to bacterium, incompatible interaction	7.12E-03
87	GO:0009651: response to salt stress	7.28E-03
88	GO:0006974: cellular response to DNA damage stimulus	7.40E-03
89	GO:0009817: defense response to fungus, incompatible interaction	8.24E-03
90	GO:0016042: lipid catabolic process	8.39E-03
91	GO:0048767: root hair elongation	8.53E-03
92	GO:0009407: toxin catabolic process	8.82E-03
93	GO:0048527: lateral root development	9.12E-03
94	GO:0010119: regulation of stomatal movement	9.12E-03
95	GO:0010043: response to zinc ion	9.12E-03
96	GO:0007568: aging	9.12E-03
97	GO:0006099: tricarboxylic acid cycle	1.00E-02
98	GO:0006631: fatty acid metabolic process	1.10E-02
99	GO:0051707: response to other organism	1.16E-02
100	GO:0000209: protein polyubiquitination	1.20E-02
101	GO:0009636: response to toxic substance	1.26E-02
102	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	1.33E-02
103	GO:0009846: pollen germination	1.37E-02
104	GO:0009736: cytokinin-activated signaling pathway	1.44E-02
105	GO:0009738: abscisic acid-activated signaling pathway	1.49E-02
106	GO:0035556: intracellular signal transduction	1.62E-02
107	GO:0048367: shoot system development	1.65E-02
108	GO:0018105: peptidyl-serine phosphorylation	1.88E-02
109	GO:0051726: regulation of cell cycle	1.92E-02
110	GO:0000398: mRNA splicing, via spliceosome	2.04E-02
111	GO:0009845: seed germination	2.29E-02
112	GO:0009790: embryo development	2.41E-02
113	GO:0016567: protein ubiquitination	2.53E-02
114	GO:0006633: fatty acid biosynthetic process	2.54E-02
115	GO:0006508: proteolysis	2.56E-02
116	GO:0016036: cellular response to phosphate starvation	2.59E-02
117	GO:0040008: regulation of growth	2.63E-02
118	GO:0007166: cell surface receptor signaling pathway	2.99E-02
119	GO:0055114: oxidation-reduction process	3.05E-02
120	GO:0009617: response to bacterium	3.08E-02
121	GO:0010468: regulation of gene expression	3.08E-02
122	GO:0006979: response to oxidative stress	3.14E-02
123	GO:0009733: response to auxin	3.50E-02
124	GO:0006970: response to osmotic stress	3.91E-02
125	GO:0009860: pollen tube growth	3.91E-02
126	GO:0015031: protein transport	3.95E-02
127	GO:0007049: cell cycle	4.01E-02
128	GO:0080167: response to karrikin	4.32E-02
129	GO:0010200: response to chitin	4.43E-02
130	GO:0016192: vesicle-mediated transport	4.48E-02
131	GO:0045892: negative regulation of transcription, DNA-templated	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0004846: urate oxidase activity	0.00E+00
2	GO:0016508: long-chain-enoyl-CoA hydratase activity	0.00E+00
3	GO:0004370: glycerol kinase activity	0.00E+00
4	GO:0042030: ATPase inhibitor activity	0.00E+00
5	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
6	GO:0033550: MAP kinase tyrosine phosphatase activity	0.00E+00
7	GO:0031593: polyubiquitin binding	7.27E-06
8	GO:0015207: adenine transmembrane transporter activity	5.03E-05
9	GO:0004671: protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity	5.03E-05
10	GO:0008692: 3-hydroxybutyryl-CoA epimerase activity	5.03E-05
11	GO:0015208: guanine transmembrane transporter activity	5.03E-05
12	GO:0015294: solute:cation symporter activity	5.03E-05
13	GO:0003988: acetyl-CoA C-acyltransferase activity	1.23E-04
14	GO:0019200: carbohydrate kinase activity	1.23E-04
15	GO:0004450: isocitrate dehydrogenase (NADP+) activity	1.23E-04
16	GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity	1.23E-04
17	GO:0004298: threonine-type endopeptidase activity	1.54E-04
18	GO:0005515: protein binding	1.62E-04
19	GO:0003840: gamma-glutamyltransferase activity	2.11E-04
20	GO:0036374: glutathione hydrolase activity	2.11E-04
21	GO:0016805: dipeptidase activity	2.11E-04
22	GO:0003863: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity	2.11E-04
23	GO:0004165: dodecenoyl-CoA delta-isomerase activity	3.09E-04
24	GO:0004300: enoyl-CoA hydratase activity	3.09E-04
25	GO:0001653: peptide receptor activity	3.09E-04
26	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	3.09E-04
27	GO:0015210: uracil transmembrane transporter activity	4.15E-04
28	GO:0031386: protein tag	5.26E-04
29	GO:0047714: galactolipase activity	6.44E-04
30	GO:0036402: proteasome-activating ATPase activity	6.44E-04
31	GO:0102391: decanoate--CoA ligase activity	7.68E-04
32	GO:0003950: NAD+ ADP-ribosyltransferase activity	7.68E-04
33	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	7.68E-04
34	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	7.68E-04
35	GO:0004620: phospholipase activity	8.97E-04
36	GO:0004467: long-chain fatty acid-CoA ligase activity	8.97E-04
37	GO:0008235: metalloexopeptidase activity	8.97E-04
38	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	1.17E-03
39	GO:0045309: protein phosphorylated amino acid binding	1.47E-03
40	GO:0047617: acyl-CoA hydrolase activity	1.47E-03
41	GO:0019904: protein domain specific binding	1.79E-03
42	GO:0004177: aminopeptidase activity	1.79E-03
43	GO:0017025: TBP-class protein binding	2.50E-03
44	GO:0004725: protein tyrosine phosphatase activity	2.69E-03
45	GO:0030276: clathrin binding	4.60E-03
46	GO:0004197: cysteine-type endopeptidase activity	5.56E-03
47	GO:0008233: peptidase activity	5.75E-03
48	GO:0016413: O-acetyltransferase activity	6.59E-03
49	GO:0009931: calcium-dependent protein serine/threonine kinase activity	7.40E-03
50	GO:0004683: calmodulin-dependent protein kinase activity	7.68E-03
51	GO:0004806: triglyceride lipase activity	7.68E-03
52	GO:0003924: GTPase activity	8.64E-03
53	GO:0030145: manganese ion binding	9.12E-03
54	GO:0004364: glutathione transferase activity	1.13E-02
55	GO:0051287: NAD binding	1.33E-02
56	GO:0016887: ATPase activity	1.34E-02
57	GO:0043565: sequence-specific DNA binding	1.38E-02
58	GO:0008234: cysteine-type peptidase activity	1.54E-02
59	GO:0022857: transmembrane transporter activity	1.77E-02
60	GO:0005524: ATP binding	1.79E-02
61	GO:0005507: copper ion binding	2.19E-02
62	GO:0008565: protein transporter activity	2.46E-02
63	GO:0008194: UDP-glycosyltransferase activity	2.95E-02
64	GO:0042802: identical protein binding	3.23E-02
65	GO:0000287: magnesium ion binding	3.66E-02
66	GO:0004601: peroxidase activity	3.71E-02
67	GO:0050660: flavin adenine dinucleotide binding	4.12E-02
68	GO:0004842: ubiquitin-protein transferase activity	4.30E-02
69	GO:0061630: ubiquitin protein ligase activity	4.48E-02
70	GO:0004674: protein serine/threonine kinase activity	4.58E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0000502: proteasome complex	3.44E-06
3	GO:0005777: peroxisome	4.70E-06
4	GO:0009514: glyoxysome	2.48E-05
5	GO:0005829: cytosol	3.11E-05
6	GO:0008540: proteasome regulatory particle, base subcomplex	3.83E-05
7	GO:0031972: chloroplast intermembrane space	5.03E-05
8	GO:0005839: proteasome core complex	1.54E-04
9	GO:0030139: endocytic vesicle	2.11E-04
10	GO:0031597: cytosolic proteasome complex	7.68E-04
11	GO:0016363: nuclear matrix	7.68E-04
12	GO:0031595: nuclear proteasome complex	8.97E-04
13	GO:0030131: clathrin adaptor complex	1.03E-03
14	GO:0005635: nuclear envelope	1.36E-03
15	GO:0030665: clathrin-coated vesicle membrane	1.47E-03
16	GO:0005783: endoplasmic reticulum	1.74E-03
17	GO:0005764: lysosome	2.32E-03
18	GO:0005737: cytoplasm	2.82E-03
19	GO:0005886: plasma membrane	5.08E-03
20	GO:0005774: vacuolar membrane	7.63E-03
21	GO:0005819: spindle	1.03E-02
22	GO:0005789: endoplasmic reticulum membrane	1.06E-02
23	GO:0031902: late endosome membrane	1.10E-02
24	GO:0005730: nucleolus	1.21E-02
25	GO:0005773: vacuole	1.46E-02
26	GO:0005834: heterotrimeric G-protein complex	1.69E-02
27	GO:0005623: cell	2.20E-02
28	GO:0009524: phragmoplast	2.24E-02
29	GO:0005759: mitochondrial matrix	2.54E-02
30	GO:0005615: extracellular space	2.95E-02
31	GO:0005794: Golgi apparatus	3.18E-02
32	GO:0005618: cell wall	3.51E-02
33	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	3.96E-02