co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G02410

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0036258: multivesicular body assembly	0.00E+00
2	GO:0043462: regulation of ATPase activity	0.00E+00
3	GO:0072660: maintenance of protein location in plasma membrane	0.00E+00
4	GO:0009991: response to extracellular stimulus	0.00E+00
5	GO:0000169: activation of MAPK activity involved in osmosensory signaling pathway	0.00E+00
6	GO:0006468: protein phosphorylation	2.64E-07
7	GO:0031348: negative regulation of defense response	1.31E-06
8	GO:0006952: defense response	7.68E-06
9	GO:0006809: nitric oxide biosynthetic process	1.21E-05
10	GO:0060548: negative regulation of cell death	2.25E-05
11	GO:0007166: cell surface receptor signaling pathway	6.75E-05
12	GO:0010183: pollen tube guidance	1.18E-04
13	GO:0009962: regulation of flavonoid biosynthetic process	1.71E-04
14	GO:0080136: priming of cellular response to stress	1.71E-04
15	GO:0010201: response to continuous far red light stimulus by the high-irradiance response system	1.71E-04
16	GO:0051245: negative regulation of cellular defense response	1.71E-04
17	GO:0000303: response to superoxide	1.71E-04
18	GO:0046777: protein autophosphorylation	2.27E-04
19	GO:0009790: embryo development	3.29E-04
20	GO:0030010: establishment of cell polarity	3.87E-04
21	GO:0019483: beta-alanine biosynthetic process	3.87E-04
22	GO:0009308: amine metabolic process	3.87E-04
23	GO:0006212: uracil catabolic process	3.87E-04
24	GO:0007584: response to nutrient	3.87E-04
25	GO:0010102: lateral root morphogenesis	4.24E-04
26	GO:0009867: jasmonic acid mediated signaling pathway	4.29E-04
27	GO:0010053: root epidermal cell differentiation	5.37E-04
28	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	6.32E-04
29	GO:1900140: regulation of seedling development	6.32E-04
30	GO:0010359: regulation of anion channel activity	6.32E-04
31	GO:0072661: protein targeting to plasma membrane	6.32E-04
32	GO:0072583: clathrin-dependent endocytosis	9.04E-04
33	GO:0010148: transpiration	9.04E-04
34	GO:0006612: protein targeting to membrane	9.04E-04
35	GO:0071323: cellular response to chitin	9.04E-04
36	GO:0070676: intralumenal vesicle formation	9.04E-04
37	GO:0048194: Golgi vesicle budding	9.04E-04
38	GO:0070301: cellular response to hydrogen peroxide	9.04E-04
39	GO:0009738: abscisic acid-activated signaling pathway	1.08E-03
40	GO:0009620: response to fungus	1.19E-03
41	GO:0042631: cellular response to water deprivation	1.19E-03
42	GO:0010107: potassium ion import	1.20E-03
43	GO:2000038: regulation of stomatal complex development	1.20E-03
44	GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA	1.20E-03
45	GO:0006878: cellular copper ion homeostasis	1.20E-03
46	GO:0010363: regulation of plant-type hypersensitive response	1.20E-03
47	GO:0010200: response to chitin	1.21E-03
48	GO:0007165: signal transduction	1.33E-03
49	GO:0031365: N-terminal protein amino acid modification	1.52E-03
50	GO:0018344: protein geranylgeranylation	1.52E-03
51	GO:0006886: intracellular protein transport	1.58E-03
52	GO:1902456: regulation of stomatal opening	1.87E-03
53	GO:1900425: negative regulation of defense response to bacterium	1.87E-03
54	GO:0009117: nucleotide metabolic process	1.87E-03
55	GO:0006904: vesicle docking involved in exocytosis	2.01E-03
56	GO:0048364: root development	2.21E-03
57	GO:0010555: response to mannitol	2.24E-03
58	GO:2000037: regulation of stomatal complex patterning	2.24E-03
59	GO:2000067: regulation of root morphogenesis	2.24E-03
60	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	2.64E-03
61	GO:0009610: response to symbiotic fungus	2.64E-03
62	GO:0043090: amino acid import	2.64E-03
63	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	2.64E-03
64	GO:0048573: photoperiodism, flowering	2.65E-03
65	GO:0008219: cell death	2.94E-03
66	GO:0009817: defense response to fungus, incompatible interaction	2.94E-03
67	GO:0043068: positive regulation of programmed cell death	3.06E-03
68	GO:0006605: protein targeting	3.06E-03
69	GO:0016559: peroxisome fission	3.06E-03
70	GO:0010468: regulation of gene expression	3.32E-03
71	GO:0048527: lateral root development	3.39E-03
72	GO:0010119: regulation of stomatal movement	3.39E-03
73	GO:0006367: transcription initiation from RNA polymerase II promoter	3.50E-03
74	GO:0010120: camalexin biosynthetic process	3.50E-03
75	GO:0030968: endoplasmic reticulum unfolded protein response	3.50E-03
76	GO:0043562: cellular response to nitrogen levels	3.50E-03
77	GO:0006002: fructose 6-phosphate metabolic process	3.50E-03
78	GO:0009880: embryonic pattern specification	3.50E-03
79	GO:0007186: G-protein coupled receptor signaling pathway	3.50E-03
80	GO:0045087: innate immune response	3.71E-03
81	GO:0042742: defense response to bacterium	3.94E-03
82	GO:0090333: regulation of stomatal closure	3.95E-03
83	GO:0046685: response to arsenic-containing substance	3.95E-03
84	GO:0006887: exocytosis	4.41E-03
85	GO:0042761: very long-chain fatty acid biosynthetic process	4.44E-03
86	GO:2000280: regulation of root development	4.44E-03
87	GO:0008202: steroid metabolic process	4.44E-03
88	GO:0048268: clathrin coat assembly	4.44E-03
89	GO:0043069: negative regulation of programmed cell death	4.93E-03
90	GO:0006970: response to osmotic stress	5.07E-03
91	GO:0035556: intracellular signal transduction	5.38E-03
92	GO:0072593: reactive oxygen species metabolic process	5.45E-03
93	GO:0009750: response to fructose	5.45E-03
94	GO:0048229: gametophyte development	5.45E-03
95	GO:0030148: sphingolipid biosynthetic process	5.45E-03
96	GO:0000266: mitochondrial fission	5.98E-03
97	GO:0012501: programmed cell death	5.98E-03
98	GO:0006807: nitrogen compound metabolic process	6.54E-03
99	GO:0010229: inflorescence development	6.54E-03
100	GO:0055046: microgametogenesis	6.54E-03
101	GO:0044550: secondary metabolite biosynthetic process	6.75E-03
102	GO:0007034: vacuolar transport	7.11E-03
103	GO:0009887: animal organ morphogenesis	7.11E-03
104	GO:0042343: indole glucosinolate metabolic process	7.69E-03
105	GO:0009863: salicylic acid mediated signaling pathway	8.92E-03
106	GO:2000377: regulation of reactive oxygen species metabolic process	8.92E-03
107	GO:0016575: histone deacetylation	9.56E-03
108	GO:0098542: defense response to other organism	1.02E-02
109	GO:0061077: chaperone-mediated protein folding	1.02E-02
110	GO:0048278: vesicle docking	1.02E-02
111	GO:0007005: mitochondrion organization	1.09E-02
112	GO:0080092: regulation of pollen tube growth	1.09E-02
113	GO:0010227: floral organ abscission	1.16E-02
114	GO:0071215: cellular response to abscisic acid stimulus	1.16E-02
115	GO:0009561: megagametogenesis	1.23E-02
116	GO:0009306: protein secretion	1.23E-02
117	GO:0042391: regulation of membrane potential	1.37E-02
118	GO:0010118: stomatal movement	1.37E-02
119	GO:0071472: cellular response to salt stress	1.45E-02
120	GO:0010154: fruit development	1.45E-02
121	GO:0010197: polar nucleus fusion	1.45E-02
122	GO:0048544: recognition of pollen	1.52E-02
123	GO:0061025: membrane fusion	1.52E-02
124	GO:0010150: leaf senescence	1.59E-02
125	GO:0009749: response to glucose	1.60E-02
126	GO:0055072: iron ion homeostasis	1.60E-02
127	GO:0006623: protein targeting to vacuole	1.60E-02
128	GO:0071554: cell wall organization or biogenesis	1.68E-02
129	GO:0002229: defense response to oomycetes	1.68E-02
130	GO:0010193: response to ozone	1.68E-02
131	GO:0006891: intra-Golgi vesicle-mediated transport	1.68E-02
132	GO:0016032: viral process	1.76E-02
133	GO:0006470: protein dephosphorylation	1.82E-02
134	GO:0009617: response to bacterium	1.90E-02
135	GO:0006464: cellular protein modification process	1.93E-02
136	GO:0015031: protein transport	2.06E-02
137	GO:0000910: cytokinesis	2.10E-02
138	GO:0009911: positive regulation of flower development	2.18E-02
139	GO:0009816: defense response to bacterium, incompatible interaction	2.27E-02
140	GO:0009607: response to biotic stimulus	2.27E-02
141	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.27E-02
142	GO:0006906: vesicle fusion	2.36E-02
143	GO:0006950: response to stress	2.45E-02
144	GO:0050832: defense response to fungus	2.58E-02
145	GO:0048481: plant ovule development	2.64E-02
146	GO:0006499: N-terminal protein myristoylation	2.83E-02
147	GO:0009723: response to ethylene	2.85E-02
148	GO:0006865: amino acid transport	3.02E-02
149	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.16E-02
150	GO:0016192: vesicle-mediated transport	3.21E-02
151	GO:0006897: endocytosis	3.53E-02
152	GO:0006631: fatty acid metabolic process	3.53E-02
153	GO:0009744: response to sucrose	3.74E-02
154	GO:0000209: protein polyubiquitination	3.85E-02
155	GO:0009644: response to high light intensity	3.96E-02
156	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	4.29E-02
157	GO:0031347: regulation of defense response	4.29E-02
158	GO:0009737: response to abscisic acid	4.39E-02
159	GO:0009736: cytokinin-activated signaling pathway	4.62E-02
160	GO:0051603: proteolysis involved in cellular protein catabolic process	4.74E-02
161	GO:0010224: response to UV-B	4.74E-02
162	GO:0006979: response to oxidative stress	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0003837: beta-ureidopropionase activity	0.00E+00
2	GO:0033550: MAP kinase tyrosine phosphatase activity	0.00E+00
3	GO:0005524: ATP binding	1.22E-09
4	GO:0016301: kinase activity	5.76E-08
5	GO:0004674: protein serine/threonine kinase activity	6.73E-07
6	GO:0005515: protein binding	1.17E-04
7	GO:0004714: transmembrane receptor protein tyrosine kinase activity	1.30E-04
8	GO:0004672: protein kinase activity	1.51E-04
9	GO:0052593: tryptamine:oxygen oxidoreductase (deaminating) activity	1.71E-04
10	GO:0052594: aminoacetone:oxygen oxidoreductase(deaminating) activity	1.71E-04
11	GO:0052595: aliphatic-amine oxidase activity	1.71E-04
12	GO:0032050: clathrin heavy chain binding	1.71E-04
13	GO:0052596: phenethylamine:oxygen oxidoreductase (deaminating) activity	1.71E-04
14	GO:0004713: protein tyrosine kinase activity	2.80E-04
15	GO:0045140: inositol phosphoceramide synthase activity	3.87E-04
16	GO:0004385: guanylate kinase activity	3.87E-04
17	GO:0031683: G-protein beta/gamma-subunit complex binding	6.32E-04
18	GO:0004663: Rab geranylgeranyltransferase activity	6.32E-04
19	GO:0004383: guanylate cyclase activity	6.32E-04
20	GO:0001664: G-protein coupled receptor binding	6.32E-04
21	GO:0005047: signal recognition particle binding	6.32E-04
22	GO:0033612: receptor serine/threonine kinase binding	7.97E-04
23	GO:0001653: peptide receptor activity	9.04E-04
24	GO:0043495: protein anchor	1.20E-03
25	GO:0004301: epoxide hydrolase activity	1.20E-03
26	GO:0030276: clathrin binding	1.28E-03
27	GO:0031593: polyubiquitin binding	1.87E-03
28	GO:0047714: galactolipase activity	1.87E-03
29	GO:0003924: GTPase activity	2.07E-03
30	GO:0008565: protein transporter activity	2.21E-03
31	GO:0102391: decanoate--CoA ligase activity	2.24E-03
32	GO:0003950: NAD+ ADP-ribosyltransferase activity	2.24E-03
33	GO:0004012: phospholipid-translocating ATPase activity	2.24E-03
34	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	2.24E-03
35	GO:0005516: calmodulin binding	2.34E-03
36	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.43E-03
37	GO:0004467: long-chain fatty acid-CoA ligase activity	2.64E-03
38	GO:0004143: diacylglycerol kinase activity	2.64E-03
39	GO:0008235: metalloexopeptidase activity	2.64E-03
40	GO:0003872: 6-phosphofructokinase activity	2.64E-03
41	GO:0004869: cysteine-type endopeptidase inhibitor activity	3.06E-03
42	GO:0003951: NAD+ kinase activity	3.50E-03
43	GO:0008142: oxysterol binding	3.50E-03
44	GO:0005267: potassium channel activity	3.50E-03
45	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	3.50E-03
46	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	3.50E-03
47	GO:0071949: FAD binding	3.95E-03
48	GO:0004712: protein serine/threonine/tyrosine kinase activity	4.05E-03
49	GO:0005545: 1-phosphatidylinositol binding	4.93E-03
50	GO:0004177: aminopeptidase activity	5.45E-03
51	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	6.54E-03
52	GO:0031072: heat shock protein binding	6.54E-03
53	GO:0008131: primary amine oxidase activity	7.11E-03
54	GO:0008061: chitin binding	7.69E-03
55	GO:0004190: aspartic-type endopeptidase activity	7.69E-03
56	GO:0030552: cAMP binding	7.69E-03
57	GO:0030553: cGMP binding	7.69E-03
58	GO:0030246: carbohydrate binding	7.77E-03
59	GO:0004871: signal transducer activity	8.09E-03
60	GO:0004725: protein tyrosine phosphatase activity	8.30E-03
61	GO:0003954: NADH dehydrogenase activity	8.92E-03
62	GO:0004407: histone deacetylase activity	8.92E-03
63	GO:0043130: ubiquitin binding	8.92E-03
64	GO:0005528: FK506 binding	8.92E-03
65	GO:0005216: ion channel activity	9.56E-03
66	GO:0043424: protein histidine kinase binding	9.56E-03
67	GO:0004707: MAP kinase activity	1.02E-02
68	GO:0047134: protein-disulfide reductase activity	1.30E-02
69	GO:0005249: voltage-gated potassium channel activity	1.37E-02
70	GO:0030551: cyclic nucleotide binding	1.37E-02
71	GO:0001085: RNA polymerase II transcription factor binding	1.45E-02
72	GO:0004791: thioredoxin-disulfide reductase activity	1.52E-02
73	GO:0048038: quinone binding	1.68E-02
74	GO:0004197: cysteine-type endopeptidase activity	1.76E-02
75	GO:0016413: O-acetyltransferase activity	2.10E-02
76	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.36E-02
77	GO:0046982: protein heterodimerization activity	2.42E-02
78	GO:0030247: polysaccharide binding	2.45E-02
79	GO:0004683: calmodulin-dependent protein kinase activity	2.45E-02
80	GO:0004806: triglyceride lipase activity	2.45E-02
81	GO:0043531: ADP binding	2.70E-02
82	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	2.93E-02
83	GO:0000149: SNARE binding	3.33E-02
84	GO:0005484: SNAP receptor activity	3.74E-02
85	GO:0042803: protein homodimerization activity	3.82E-02
86	GO:0005525: GTP binding	3.83E-02
87	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	3.94E-02
88	GO:0035091: phosphatidylinositol binding	3.96E-02
89	GO:0004722: protein serine/threonine phosphatase activity	4.00E-02
90	GO:0005198: structural molecule activity	4.06E-02
91	GO:0015293: symporter activity	4.06E-02
92	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.17E-02
93	GO:0015171: amino acid transmembrane transporter activity	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0005674: transcription factor TFIIF complex	0.00E+00
2	GO:0005785: signal recognition particle receptor complex	0.00E+00
3	GO:0005886: plasma membrane	1.01E-12
4	GO:0016021: integral component of membrane	8.18E-05
5	GO:0031304: intrinsic component of mitochondrial inner membrane	3.87E-04
6	GO:0005829: cytosol	5.74E-04
7	GO:0030139: endocytic vesicle	6.32E-04
8	GO:0070062: extracellular exosome	9.04E-04
9	GO:0005968: Rab-protein geranylgeranyltransferase complex	9.04E-04
10	GO:0019898: extrinsic component of membrane	1.47E-03
11	GO:0005945: 6-phosphofructokinase complex	1.52E-03
12	GO:0000813: ESCRT I complex	1.52E-03
13	GO:0016363: nuclear matrix	2.24E-03
14	GO:0030131: clathrin adaptor complex	3.06E-03
15	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	3.50E-03
16	GO:0031902: late endosome membrane	4.41E-03
17	GO:0030665: clathrin-coated vesicle membrane	4.44E-03
18	GO:0017119: Golgi transport complex	4.93E-03
19	GO:0030125: clathrin vesicle coat	4.93E-03
20	GO:0016602: CCAAT-binding factor complex	6.54E-03
21	GO:0005795: Golgi stack	7.69E-03
22	GO:0005834: heterotrimeric G-protein complex	8.11E-03
23	GO:0005802: trans-Golgi network	1.01E-02
24	GO:0005741: mitochondrial outer membrane	1.02E-02
25	GO:0005905: clathrin-coated pit	1.02E-02
26	GO:0030136: clathrin-coated vesicle	1.30E-02
27	GO:0009504: cell plate	1.60E-02
28	GO:0000145: exocyst	1.76E-02
29	GO:0005783: endoplasmic reticulum	1.80E-02
30	GO:0005778: peroxisomal membrane	2.01E-02
31	GO:0000932: P-body	2.18E-02
32	GO:0005667: transcription factor complex	2.36E-02
33	GO:0005777: peroxisome	2.45E-02
34	GO:0009506: plasmodesma	2.96E-02
35	GO:0000786: nucleosome	3.02E-02
36	GO:0031201: SNARE complex	3.53E-02
37	GO:0090406: pollen tube	3.74E-02
38	GO:0005856: cytoskeleton	4.06E-02