co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G01810

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0048227: plasma membrane to endosome transport	0.00E+00
2	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
3	GO:0006182: cGMP biosynthetic process	0.00E+00
4	GO:0043462: regulation of ATPase activity	0.00E+00
5	GO:0080169: cellular response to boron-containing substance deprivation	0.00E+00
6	GO:0051788: response to misfolded protein	5.31E-07
7	GO:0046686: response to cadmium ion	1.78E-05
8	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	2.28E-05
9	GO:0043248: proteasome assembly	2.28E-05
10	GO:0006102: isocitrate metabolic process	5.73E-05
11	GO:0009408: response to heat	9.80E-05
12	GO:0048455: stamen formation	1.00E-04
13	GO:0035266: meristem growth	1.00E-04
14	GO:0007292: female gamete generation	1.00E-04
15	GO:0006805: xenobiotic metabolic process	1.00E-04
16	GO:1990641: response to iron ion starvation	1.00E-04
17	GO:0080173: male-female gamete recognition during double fertilization	1.00E-04
18	GO:0010726: positive regulation of hydrogen peroxide metabolic process	1.00E-04
19	GO:0006099: tricarboxylic acid cycle	1.72E-04
20	GO:0009651: response to salt stress	1.88E-04
21	GO:0006101: citrate metabolic process	2.36E-04
22	GO:1902000: homogentisate catabolic process	2.36E-04
23	GO:0019441: tryptophan catabolic process to kynurenine	2.36E-04
24	GO:0097054: L-glutamate biosynthetic process	2.36E-04
25	GO:0019521: D-gluconate metabolic process	2.36E-04
26	GO:0019374: galactolipid metabolic process	2.36E-04
27	GO:0010498: proteasomal protein catabolic process	3.92E-04
28	GO:0006556: S-adenosylmethionine biosynthetic process	3.92E-04
29	GO:0010359: regulation of anion channel activity	3.92E-04
30	GO:0009072: aromatic amino acid family metabolic process	3.92E-04
31	GO:0060968: regulation of gene silencing	3.92E-04
32	GO:0098542: defense response to other organism	3.94E-04
33	GO:0030433: ubiquitin-dependent ERAD pathway	4.31E-04
34	GO:0006511: ubiquitin-dependent protein catabolic process	5.38E-04
35	GO:0006537: glutamate biosynthetic process	5.64E-04
36	GO:0010255: glucose mediated signaling pathway	5.64E-04
37	GO:0001676: long-chain fatty acid metabolic process	5.64E-04
38	GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA	7.50E-04
39	GO:0019676: ammonia assimilation cycle	7.50E-04
40	GO:0010363: regulation of plant-type hypersensitive response	7.50E-04
41	GO:0007264: small GTPase mediated signal transduction	8.35E-04
42	GO:0006090: pyruvate metabolic process	9.47E-04
43	GO:0006097: glyoxylate cycle	9.47E-04
44	GO:0007029: endoplasmic reticulum organization	9.47E-04
45	GO:0009615: response to virus	1.11E-03
46	GO:0035435: phosphate ion transmembrane transport	1.16E-03
47	GO:1902456: regulation of stomatal opening	1.16E-03
48	GO:0010942: positive regulation of cell death	1.16E-03
49	GO:0006121: mitochondrial electron transport, succinate to ubiquinone	1.16E-03
50	GO:0006751: glutathione catabolic process	1.16E-03
51	GO:0048827: phyllome development	1.16E-03
52	GO:0048232: male gamete generation	1.16E-03
53	GO:0009094: L-phenylalanine biosynthetic process	1.38E-03
54	GO:0006499: N-terminal protein myristoylation	1.58E-03
55	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	1.62E-03
56	GO:0048528: post-embryonic root development	1.62E-03
57	GO:0010043: response to zinc ion	1.65E-03
58	GO:0010078: maintenance of root meristem identity	1.87E-03
59	GO:0006644: phospholipid metabolic process	1.87E-03
60	GO:0009061: anaerobic respiration	1.87E-03
61	GO:0006457: protein folding	2.40E-03
62	GO:0007338: single fertilization	2.41E-03
63	GO:0006098: pentose-phosphate shunt	2.41E-03
64	GO:0048268: clathrin coat assembly	2.70E-03
65	GO:0008202: steroid metabolic process	2.70E-03
66	GO:0006855: drug transmembrane transport	2.70E-03
67	GO:0090332: stomatal closure	2.70E-03
68	GO:0043069: negative regulation of programmed cell death	3.00E-03
69	GO:0048829: root cap development	3.00E-03
70	GO:0006896: Golgi to vacuole transport	3.00E-03
71	GO:0009809: lignin biosynthetic process	3.11E-03
72	GO:0051603: proteolysis involved in cellular protein catabolic process	3.22E-03
73	GO:0030148: sphingolipid biosynthetic process	3.31E-03
74	GO:0010015: root morphogenesis	3.31E-03
75	GO:0000266: mitochondrial fission	3.63E-03
76	GO:0006629: lipid metabolic process	3.92E-03
77	GO:0006108: malate metabolic process	3.95E-03
78	GO:0002237: response to molecule of bacterial origin	4.30E-03
79	GO:0009933: meristem structural organization	4.30E-03
80	GO:0090351: seedling development	4.64E-03
81	GO:0042343: indole glucosinolate metabolic process	4.64E-03
82	GO:0034976: response to endoplasmic reticulum stress	5.00E-03
83	GO:0006071: glycerol metabolic process	5.00E-03
84	GO:0010187: negative regulation of seed germination	5.37E-03
85	GO:0006730: one-carbon metabolic process	6.54E-03
86	GO:0055114: oxidation-reduction process	6.75E-03
87	GO:0009693: ethylene biosynthetic process	6.94E-03
88	GO:0006952: defense response	7.00E-03
89	GO:0019722: calcium-mediated signaling	7.35E-03
90	GO:0042147: retrograde transport, endosome to Golgi	7.78E-03
91	GO:0009555: pollen development	8.12E-03
92	GO:0010118: stomatal movement	8.21E-03
93	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	8.52E-03
94	GO:0007166: cell surface receptor signaling pathway	8.71E-03
95	GO:0002229: defense response to oomycetes	1.00E-02
96	GO:0010193: response to ozone	1.00E-02
97	GO:0071281: cellular response to iron ion	1.10E-02
98	GO:0030163: protein catabolic process	1.10E-02
99	GO:0009567: double fertilization forming a zygote and endosperm	1.15E-02
100	GO:0009911: positive regulation of flower development	1.30E-02
101	GO:0010029: regulation of seed germination	1.35E-02
102	GO:0006974: cellular response to DNA damage stimulus	1.40E-02
103	GO:0048573: photoperiodism, flowering	1.46E-02
104	GO:0046777: protein autophosphorylation	1.57E-02
105	GO:0010311: lateral root formation	1.62E-02
106	GO:0048767: root hair elongation	1.62E-02
107	GO:0009407: toxin catabolic process	1.68E-02
108	GO:0010119: regulation of stomatal movement	1.74E-02
109	GO:0045087: innate immune response	1.86E-02
110	GO:0006897: endocytosis	2.10E-02
111	GO:0006631: fatty acid metabolic process	2.10E-02
112	GO:0016042: lipid catabolic process	2.11E-02
113	GO:0009751: response to salicylic acid	2.14E-02
114	GO:0042542: response to hydrogen peroxide	2.16E-02
115	GO:0009744: response to sucrose	2.22E-02
116	GO:0051707: response to other organism	2.22E-02
117	GO:0009636: response to toxic substance	2.41E-02
118	GO:0009965: leaf morphogenesis	2.41E-02
119	GO:0031347: regulation of defense response	2.55E-02
120	GO:0015031: protein transport	2.68E-02
121	GO:0048367: shoot system development	3.17E-02
122	GO:0009620: response to fungus	3.31E-02
123	GO:0009553: embryo sac development	3.46E-02
124	GO:0009624: response to nematode	3.53E-02
125	GO:0018105: peptidyl-serine phosphorylation	3.61E-02
126	GO:0006396: RNA processing	3.61E-02
127	GO:0009738: abscisic acid-activated signaling pathway	3.72E-02
128	GO:0007165: signal transduction	4.92E-02
129	GO:0016036: cellular response to phosphate starvation	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0003846: 2-acylglycerol O-acyltransferase activity	0.00E+00
2	GO:0015930: glutamate synthase activity	0.00E+00
3	GO:0016504: peptidase activator activity	0.00E+00
4	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
5	GO:0004622: lysophospholipase activity	0.00E+00
6	GO:0070577: lysine-acetylated histone binding	0.00E+00
7	GO:0005524: ATP binding	1.37E-06
8	GO:0005093: Rab GDP-dissociation inhibitor activity	2.01E-06
9	GO:0031593: polyubiquitin binding	2.28E-05
10	GO:0036402: proteasome-activating ATPase activity	2.28E-05
11	GO:0016041: glutamate synthase (ferredoxin) activity	1.00E-04
12	GO:0090430: caffeoyl-CoA: alcohol caffeoyl transferase activity	1.00E-04
13	GO:0045140: inositol phosphoceramide synthase activity	2.36E-04
14	GO:0019172: glyoxalase III activity	2.36E-04
15	GO:0004061: arylformamidase activity	2.36E-04
16	GO:0015036: disulfide oxidoreductase activity	2.36E-04
17	GO:0004450: isocitrate dehydrogenase (NADP+) activity	2.36E-04
18	GO:0008517: folic acid transporter activity	2.36E-04
19	GO:0003994: aconitate hydratase activity	2.36E-04
20	GO:0032934: sterol binding	2.36E-04
21	GO:0016887: ATPase activity	2.37E-04
22	GO:0017025: TBP-class protein binding	2.60E-04
23	GO:0003840: gamma-glutamyltransferase activity	3.92E-04
24	GO:0036374: glutathione hydrolase activity	3.92E-04
25	GO:0004383: guanylate cyclase activity	3.92E-04
26	GO:0016805: dipeptidase activity	3.92E-04
27	GO:0004478: methionine adenosyltransferase activity	3.92E-04
28	GO:0004298: threonine-type endopeptidase activity	3.94E-04
29	GO:0008276: protein methyltransferase activity	5.64E-04
30	GO:0001653: peptide receptor activity	5.64E-04
31	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	5.64E-04
32	GO:0070628: proteasome binding	7.50E-04
33	GO:0004470: malic enzyme activity	7.50E-04
34	GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor	7.50E-04
35	GO:0047769: arogenate dehydratase activity	7.50E-04
36	GO:0004664: prephenate dehydratase activity	7.50E-04
37	GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity	7.50E-04
38	GO:0000104: succinate dehydrogenase activity	9.47E-04
39	GO:0008177: succinate dehydrogenase (ubiquinone) activity	9.47E-04
40	GO:0051538: 3 iron, 4 sulfur cluster binding	9.47E-04
41	GO:0002020: protease binding	9.47E-04
42	GO:0047714: galactolipase activity	1.16E-03
43	GO:0102391: decanoate--CoA ligase activity	1.38E-03
44	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	1.38E-03
45	GO:0005515: protein binding	1.47E-03
46	GO:0005096: GTPase activator activity	1.51E-03
47	GO:0004620: phospholipase activity	1.62E-03
48	GO:0004467: long-chain fatty acid-CoA ligase activity	1.62E-03
49	GO:0004143: diacylglycerol kinase activity	1.62E-03
50	GO:0008235: metalloexopeptidase activity	1.62E-03
51	GO:0050897: cobalt ion binding	1.65E-03
52	GO:0016491: oxidoreductase activity	1.74E-03
53	GO:0052747: sinapyl alcohol dehydrogenase activity	1.87E-03
54	GO:0003951: NAD+ kinase activity	2.14E-03
55	GO:0008142: oxysterol binding	2.14E-03
56	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	2.14E-03
57	GO:0008889: glycerophosphodiester phosphodiesterase activity	2.41E-03
58	GO:0047617: acyl-CoA hydrolase activity	2.70E-03
59	GO:0051287: NAD binding	2.80E-03
60	GO:0004713: protein tyrosine kinase activity	3.00E-03
61	GO:0008171: O-methyltransferase activity	3.00E-03
62	GO:0005545: 1-phosphatidylinositol binding	3.00E-03
63	GO:0004177: aminopeptidase activity	3.31E-03
64	GO:0008559: xenobiotic-transporting ATPase activity	3.31E-03
65	GO:0045551: cinnamyl-alcohol dehydrogenase activity	3.63E-03
66	GO:0005315: inorganic phosphate transmembrane transporter activity	3.95E-03
67	GO:0031072: heat shock protein binding	3.95E-03
68	GO:0051082: unfolded protein binding	4.42E-03
69	GO:0043424: protein histidine kinase binding	5.75E-03
70	GO:0003756: protein disulfide isomerase activity	7.35E-03
71	GO:0030276: clathrin binding	8.65E-03
72	GO:0010181: FMN binding	9.10E-03
73	GO:0016597: amino acid binding	1.25E-02
74	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.40E-02
75	GO:0008233: peptidase activity	1.44E-02
76	GO:0004806: triglyceride lipase activity	1.46E-02
77	GO:0030247: polysaccharide binding	1.46E-02
78	GO:0004683: calmodulin-dependent protein kinase activity	1.46E-02
79	GO:0015238: drug transmembrane transporter activity	1.62E-02
80	GO:0004674: protein serine/threonine kinase activity	1.73E-02
81	GO:0030145: manganese ion binding	1.74E-02
82	GO:0005509: calcium ion binding	1.79E-02
83	GO:0051539: 4 iron, 4 sulfur cluster binding	2.03E-02
84	GO:0004364: glutathione transferase activity	2.16E-02
85	GO:0003924: GTPase activity	2.17E-02
86	GO:0005215: transporter activity	2.25E-02
87	GO:0008565: protein transporter activity	4.70E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0000502: proteasome complex	2.25E-08
3	GO:0008540: proteasome regulatory particle, base subcomplex	1.54E-06
4	GO:0005829: cytosol	7.87E-06
5	GO:0005839: proteasome core complex	1.36E-05
6	GO:0031597: cytosolic proteasome complex	3.24E-05
7	GO:0031595: nuclear proteasome complex	4.38E-05
8	GO:0005618: cell wall	6.49E-05
9	GO:0005886: plasma membrane	9.36E-05
10	GO:0005774: vacuolar membrane	2.05E-04
11	GO:0031314: extrinsic component of mitochondrial inner membrane	2.36E-04
12	GO:0030136: clathrin-coated vesicle	5.51E-04
13	GO:0009506: plasmodesma	6.78E-04
14	GO:0030904: retromer complex	1.16E-03
15	GO:0005794: Golgi apparatus	1.57E-03
16	GO:0045273: respiratory chain complex II	1.87E-03
17	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	1.87E-03
18	GO:0005777: peroxisome	2.00E-03
19	GO:0090404: pollen tube tip	3.31E-03
20	GO:0005905: clathrin-coated pit	6.14E-03
21	GO:0005773: vacuole	6.43E-03
22	GO:0005783: endoplasmic reticulum	1.10E-02
23	GO:0030529: intracellular ribonucleoprotein complex	1.30E-02
24	GO:0000932: P-body	1.30E-02
25	GO:0016020: membrane	1.34E-02
26	GO:0005788: endoplasmic reticulum lumen	1.35E-02
27	GO:0000325: plant-type vacuole	1.74E-02
28	GO:0031902: late endosome membrane	2.10E-02
29	GO:0009570: chloroplast stroma	2.81E-02
30	GO:0005834: heterotrimeric G-protein complex	3.24E-02
31	GO:0005730: nucleolus	3.82E-02
32	GO:0005623: cell	4.22E-02
33	GO:0009524: phragmoplast	4.30E-02
34	GO:0005759: mitochondrial matrix	4.87E-02