Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G01660

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006182: cGMP biosynthetic process0.00E+00
2GO:0017126: nucleologenesis0.00E+00
3GO:0044794: positive regulation by host of viral process0.00E+00
4GO:0006457: protein folding8.64E-06
5GO:0080026: response to indolebutyric acid6.16E-05
6GO:0009062: fatty acid catabolic process1.09E-04
7GO:0080024: indolebutyric acid metabolic process1.62E-04
8GO:0072334: UDP-galactose transmembrane transport1.62E-04
9GO:0009615: response to virus1.81E-04
10GO:0000956: nuclear-transcribed mRNA catabolic process2.21E-04
11GO:0009408: response to heat3.81E-04
12GO:0033962: cytoplasmic mRNA processing body assembly4.20E-04
13GO:0046686: response to cadmium ion5.42E-04
14GO:0030968: endoplasmic reticulum unfolded protein response6.45E-04
15GO:0009699: phenylpropanoid biosynthetic process6.45E-04
16GO:0006098: pentose-phosphate shunt7.25E-04
17GO:0090332: stomatal closure8.07E-04
18GO:0030042: actin filament depolymerization8.07E-04
19GO:0002213: defense response to insect1.07E-03
20GO:0006094: gluconeogenesis1.16E-03
21GO:0006413: translational initiation1.16E-03
22GO:0009617: response to bacterium1.46E-03
23GO:0010187: negative regulation of seed germination1.55E-03
24GO:0051302: regulation of cell division1.65E-03
25GO:0098542: defense response to other organism1.76E-03
26GO:0006979: response to oxidative stress1.89E-03
27GO:0010227: floral organ abscission1.98E-03
28GO:0008033: tRNA processing2.33E-03
29GO:0006635: fatty acid beta-oxidation2.82E-03
30GO:0080156: mitochondrial mRNA modification2.82E-03
31GO:0016032: viral process2.95E-03
32GO:0030163: protein catabolic process3.08E-03
33GO:0006906: vesicle fusion3.90E-03
34GO:0048767: root hair elongation4.49E-03
35GO:0006499: N-terminal protein myristoylation4.64E-03
36GO:0007568: aging4.80E-03
37GO:0006887: exocytosis5.75E-03
38GO:0009555: pollen development6.02E-03
39GO:0009809: lignin biosynthetic process7.47E-03
40GO:0010224: response to UV-B7.65E-03
41GO:0006508: proteolysis7.74E-03
42GO:0006417: regulation of translation8.02E-03
43GO:0006096: glycolytic process8.40E-03
44GO:0009651: response to salt stress8.66E-03
45GO:0009620: response to fungus8.97E-03
46GO:0009553: embryo sac development9.36E-03
47GO:0018105: peptidyl-serine phosphorylation9.75E-03
48GO:0000398: mRNA splicing, via spliceosome1.06E-02
49GO:0009790: embryo development1.25E-02
50GO:0040008: regulation of growth1.36E-02
51GO:0007166: cell surface receptor signaling pathway1.54E-02
52GO:0009860: pollen tube growth2.02E-02
53GO:0016192: vesicle-mediated transport2.31E-02
54GO:0046777: protein autophosphorylation2.34E-02
55GO:0032259: methylation2.86E-02
56GO:0009751: response to salicylic acid2.92E-02
57GO:0009735: response to cytokinin4.16E-02
58GO:0009738: abscisic acid-activated signaling pathway4.33E-02
59GO:0035556: intracellular signal transduction4.61E-02
60GO:0055114: oxidation-reduction process4.71E-02
RankGO TermAdjusted P value
1GO:0046424: ferulate 5-hydroxylase activity0.00E+00
2GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity2.41E-05
3GO:0004383: guanylate cyclase activity1.09E-04
4GO:0005460: UDP-glucose transmembrane transporter activity1.62E-04
5GO:0004165: dodecenoyl-CoA delta-isomerase activity1.62E-04
6GO:0002020: protease binding2.84E-04
7GO:0005459: UDP-galactose transmembrane transporter activity2.84E-04
8GO:0004332: fructose-bisphosphate aldolase activity3.51E-04
9GO:0045309: protein phosphorylated amino acid binding8.07E-04
10GO:0019904: protein domain specific binding9.78E-04
11GO:0004022: alcohol dehydrogenase (NAD) activity1.16E-03
12GO:0005524: ATP binding1.40E-03
13GO:0003743: translation initiation factor activity1.43E-03
14GO:0005509: calcium ion binding1.69E-03
15GO:0010181: FMN binding2.57E-03
16GO:0016491: oxidoreductase activity2.65E-03
17GO:0008237: metallopeptidase activity3.35E-03
18GO:0009931: calcium-dependent protein serine/threonine kinase activity3.90E-03
19GO:0004683: calmodulin-dependent protein kinase activity4.05E-03
20GO:0030247: polysaccharide binding4.05E-03
21GO:0004222: metalloendopeptidase activity4.64E-03
22GO:0003697: single-stranded DNA binding5.11E-03
23GO:0000149: SNARE binding5.42E-03
24GO:0051539: 4 iron, 4 sulfur cluster binding5.59E-03
25GO:0005484: SNAP receptor activity6.08E-03
26GO:0043621: protein self-association6.42E-03
27GO:0003779: actin binding9.36E-03
28GO:0051082: unfolded protein binding9.56E-03
29GO:0016829: lyase activity1.18E-02
30GO:0004252: serine-type endopeptidase activity1.20E-02
31GO:0004674: protein serine/threonine kinase activity1.41E-02
32GO:0003729: mRNA binding1.82E-02
33GO:0008168: methyltransferase activity1.86E-02
34GO:0043531: ADP binding2.04E-02
35GO:0004497: monooxygenase activity2.23E-02
36GO:0003723: RNA binding2.52E-02
37GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen2.68E-02
38GO:0003924: GTPase activity2.95E-02
RankGO TermAdjusted P value
1GO:0005788: endoplasmic reticulum lumen4.16E-06
2GO:1990726: Lsm1-7-Pat1 complex1.62E-04
3GO:0030173: integral component of Golgi membrane4.20E-04
4GO:0005688: U6 snRNP5.68E-04
5GO:0046540: U4/U6 x U5 tri-snRNP complex6.45E-04
6GO:0071011: precatalytic spliceosome8.07E-04
7GO:0071013: catalytic step 2 spliceosome9.78E-04
8GO:0008541: proteasome regulatory particle, lid subcomplex9.78E-04
9GO:0005783: endoplasmic reticulum1.17E-03
10GO:0005750: mitochondrial respiratory chain complex III1.25E-03
11GO:0030176: integral component of endoplasmic reticulum membrane1.35E-03
12GO:0015629: actin cytoskeleton1.98E-03
13GO:0005618: cell wall2.21E-03
14GO:0016592: mediator complex2.95E-03
15GO:0000932: P-body3.63E-03
16GO:0031201: SNARE complex5.75E-03
17GO:0005794: Golgi apparatus6.10E-03
18GO:0000502: proteasome complex7.47E-03
19GO:0005635: nuclear envelope7.84E-03
20GO:0048046: apoplast9.60E-03
21GO:0005732: small nucleolar ribonucleoprotein complex1.02E-02
22GO:0005622: intracellular1.07E-02
23GO:0010287: plastoglobule1.08E-02
24GO:0005886: plasma membrane1.27E-02
25GO:0009506: plasmodesma1.37E-02
26GO:0009536: plastid1.50E-02
27GO:0005829: cytosol1.67E-02
28GO:0016020: membrane3.93E-02
29GO:0005774: vacuolar membrane4.23E-02
30GO:0022626: cytosolic ribosome4.30E-02
31GO:0009507: chloroplast4.73E-02
32GO:0005777: peroxisome4.89E-02
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Gene type



Gene DE type