co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G00950

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006649: phospholipid transfer to membrane	0.00E+00
2	GO:0045014: negative regulation of transcription by glucose	0.00E+00
3	GO:0006780: uroporphyrinogen III biosynthetic process	0.00E+00
4	GO:0007638: mechanosensory behavior	0.00E+00
5	GO:0015805: S-adenosyl-L-methionine transport	0.00E+00
6	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.51E-07
7	GO:0048443: stamen development	2.19E-04
8	GO:0015808: L-alanine transport	3.04E-04
9	GO:0043266: regulation of potassium ion transport	3.04E-04
10	GO:0010480: microsporocyte differentiation	3.04E-04
11	GO:0031338: regulation of vesicle fusion	3.04E-04
12	GO:0006723: cuticle hydrocarbon biosynthetic process	3.04E-04
13	GO:0080051: cutin transport	3.04E-04
14	GO:2000021: regulation of ion homeostasis	3.04E-04
15	GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway	3.04E-04
16	GO:0060627: regulation of vesicle-mediated transport	3.04E-04
17	GO:0051180: vitamin transport	3.04E-04
18	GO:0070509: calcium ion import	3.04E-04
19	GO:0007263: nitric oxide mediated signal transduction	3.04E-04
20	GO:0030974: thiamine pyrophosphate transport	3.04E-04
21	GO:0071554: cell wall organization or biogenesis	3.99E-04
22	GO:0009638: phototropism	5.40E-04
23	GO:0045717: negative regulation of fatty acid biosynthetic process	6.66E-04
24	GO:0010541: acropetal auxin transport	6.66E-04
25	GO:0098712: L-glutamate import across plasma membrane	6.66E-04
26	GO:0010289: homogalacturonan biosynthetic process	6.66E-04
27	GO:0010270: photosystem II oxygen evolving complex assembly	6.66E-04
28	GO:0015804: neutral amino acid transport	6.66E-04
29	GO:0010198: synergid death	6.66E-04
30	GO:0015908: fatty acid transport	6.66E-04
31	GO:0010115: regulation of abscisic acid biosynthetic process	6.66E-04
32	GO:0015893: drug transport	6.66E-04
33	GO:0006816: calcium ion transport	7.28E-04
34	GO:0015995: chlorophyll biosynthetic process	7.89E-04
35	GO:0010411: xyloglucan metabolic process	7.89E-04
36	GO:0012501: programmed cell death	8.31E-04
37	GO:0010152: pollen maturation	8.31E-04
38	GO:0090630: activation of GTPase activity	1.08E-03
39	GO:2001295: malonyl-CoA biosynthetic process	1.08E-03
40	GO:1902448: positive regulation of shade avoidance	1.08E-03
41	GO:0006421: asparaginyl-tRNA aminoacylation	1.08E-03
42	GO:0043447: alkane biosynthetic process	1.08E-03
43	GO:0010160: formation of animal organ boundary	1.08E-03
44	GO:0006833: water transport	1.31E-03
45	GO:0010025: wax biosynthetic process	1.31E-03
46	GO:0007231: osmosensory signaling pathway	1.55E-03
47	GO:0051639: actin filament network formation	1.55E-03
48	GO:0034059: response to anoxia	1.55E-03
49	GO:0080170: hydrogen peroxide transmembrane transport	1.55E-03
50	GO:0043481: anthocyanin accumulation in tissues in response to UV light	1.55E-03
51	GO:0042546: cell wall biogenesis	1.74E-03
52	GO:0016998: cell wall macromolecule catabolic process	1.76E-03
53	GO:0035428: hexose transmembrane transport	1.92E-03
54	GO:0010222: stem vascular tissue pattern formation	2.07E-03
55	GO:0051764: actin crosslink formation	2.07E-03
56	GO:0006085: acetyl-CoA biosynthetic process	2.07E-03
57	GO:0006183: GTP biosynthetic process	2.07E-03
58	GO:0033500: carbohydrate homeostasis	2.07E-03
59	GO:0031122: cytoplasmic microtubule organization	2.07E-03
60	GO:0006468: protein phosphorylation	2.32E-03
61	GO:0000304: response to singlet oxygen	2.65E-03
62	GO:0034220: ion transmembrane transport	2.67E-03
63	GO:0046323: glucose import	2.88E-03
64	GO:0007165: signal transduction	2.93E-03
65	GO:0010405: arabinogalactan protein metabolic process	3.27E-03
66	GO:0006751: glutathione catabolic process	3.27E-03
67	GO:0006828: manganese ion transport	3.27E-03
68	GO:0060918: auxin transport	3.27E-03
69	GO:0006796: phosphate-containing compound metabolic process	3.27E-03
70	GO:0018258: protein O-linked glycosylation via hydroxyproline	3.27E-03
71	GO:0009624: response to nematode	3.79E-03
72	GO:0006694: steroid biosynthetic process	3.93E-03
73	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	3.93E-03
74	GO:2000033: regulation of seed dormancy process	3.93E-03
75	GO:0005975: carbohydrate metabolic process	4.17E-03
76	GO:0006955: immune response	4.64E-03
77	GO:0043090: amino acid import	4.64E-03
78	GO:0048437: floral organ development	4.64E-03
79	GO:0008610: lipid biosynthetic process	5.39E-03
80	GO:0006526: arginine biosynthetic process	6.18E-03
81	GO:0009808: lignin metabolic process	6.18E-03
82	GO:0009657: plastid organization	6.18E-03
83	GO:0006754: ATP biosynthetic process	7.01E-03
84	GO:0048589: developmental growth	7.01E-03
85	GO:0006629: lipid metabolic process	7.34E-03
86	GO:0006779: porphyrin-containing compound biosynthetic process	7.87E-03
87	GO:0010162: seed dormancy process	8.77E-03
88	GO:0006782: protoporphyrinogen IX biosynthetic process	8.77E-03
89	GO:0019538: protein metabolic process	8.77E-03
90	GO:0006839: mitochondrial transport	9.68E-03
91	GO:0048229: gametophyte development	9.71E-03
92	GO:0009684: indoleacetic acid biosynthetic process	9.71E-03
93	GO:0046856: phosphatidylinositol dephosphorylation	9.71E-03
94	GO:0006415: translational termination	9.71E-03
95	GO:0008361: regulation of cell size	1.07E-02
96	GO:0006820: anion transport	1.07E-02
97	GO:0009718: anthocyanin-containing compound biosynthetic process	1.17E-02
98	GO:0010075: regulation of meristem growth	1.17E-02
99	GO:0010588: cotyledon vascular tissue pattern formation	1.17E-02
100	GO:0010102: lateral root morphogenesis	1.17E-02
101	GO:0009785: blue light signaling pathway	1.17E-02
102	GO:0010540: basipetal auxin transport	1.27E-02
103	GO:0009934: regulation of meristem structural organization	1.27E-02
104	GO:0048768: root hair cell tip growth	1.27E-02
105	GO:0010143: cutin biosynthetic process	1.27E-02
106	GO:0010030: positive regulation of seed germination	1.38E-02
107	GO:0070588: calcium ion transmembrane transport	1.38E-02
108	GO:0042538: hyperosmotic salinity response	1.38E-02
109	GO:0006857: oligopeptide transport	1.59E-02
110	GO:0051017: actin filament bundle assembly	1.60E-02
111	GO:0007010: cytoskeleton organization	1.60E-02
112	GO:0071555: cell wall organization	1.68E-02
113	GO:0006418: tRNA aminoacylation for protein translation	1.72E-02
114	GO:0007017: microtubule-based process	1.72E-02
115	GO:0009416: response to light stimulus	1.75E-02
116	GO:0031408: oxylipin biosynthetic process	1.84E-02
117	GO:0046777: protein autophosphorylation	1.90E-02
118	GO:0009733: response to auxin	2.05E-02
119	GO:0009306: protein secretion	2.22E-02
120	GO:0006284: base-excision repair	2.22E-02
121	GO:0016117: carotenoid biosynthetic process	2.35E-02
122	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	2.35E-02
123	GO:0000413: protein peptidyl-prolyl isomerization	2.48E-02
124	GO:0048653: anther development	2.48E-02
125	GO:0042631: cellular response to water deprivation	2.48E-02
126	GO:0042335: cuticle development	2.48E-02
127	GO:0042391: regulation of membrane potential	2.48E-02
128	GO:0010182: sugar mediated signaling pathway	2.62E-02
129	GO:0008360: regulation of cell shape	2.62E-02
130	GO:0009958: positive gravitropism	2.62E-02
131	GO:0006520: cellular amino acid metabolic process	2.62E-02
132	GO:0016042: lipid catabolic process	2.75E-02
133	GO:0016310: phosphorylation	3.02E-02
134	GO:0016132: brassinosteroid biosynthetic process	3.04E-02
135	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	3.04E-02
136	GO:0009753: response to jasmonic acid	3.11E-02
137	GO:0048235: pollen sperm cell differentiation	3.19E-02
138	GO:0007264: small GTPase mediated signal transduction	3.19E-02
139	GO:0006810: transport	3.21E-02
140	GO:0006633: fatty acid biosynthetic process	3.32E-02
141	GO:0030163: protein catabolic process	3.33E-02
142	GO:0009639: response to red or far red light	3.49E-02
143	GO:0045490: pectin catabolic process	3.65E-02
144	GO:0007623: circadian rhythm	3.65E-02
145	GO:0010027: thylakoid membrane organization	3.95E-02
146	GO:0009627: systemic acquired resistance	4.27E-02
147	GO:0042128: nitrate assimilation	4.27E-02
148	GO:0016311: dephosphorylation	4.60E-02
149	GO:0009817: defense response to fungus, incompatible interaction	4.77E-02
150	GO:0030244: cellulose biosynthetic process	4.77E-02
151	GO:0010311: lateral root formation	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0004852: uroporphyrinogen-III synthase activity	0.00E+00
2	GO:0019146: arabinose-5-phosphate isomerase activity	0.00E+00
3	GO:0050614: delta24-sterol reductase activity	0.00E+00
4	GO:0005222: intracellular cAMP activated cation channel activity	0.00E+00
5	GO:0047513: 1,2-alpha-L-fucosidase activity	0.00E+00
6	GO:0038198: auxin receptor activity	0.00E+00
7	GO:0043864: indoleacetamide hydrolase activity	0.00E+00
8	GO:0004674: protein serine/threonine kinase activity	1.59E-05
9	GO:0010011: auxin binding	6.01E-05
10	GO:0015245: fatty acid transporter activity	3.04E-04
11	GO:0005221: intracellular cyclic nucleotide activated cation channel activity	3.04E-04
12	GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity	3.04E-04
13	GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity	3.04E-04
14	GO:0046912: transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	3.04E-04
15	GO:0005227: calcium activated cation channel activity	3.04E-04
16	GO:0015194: L-serine transmembrane transporter activity	3.04E-04
17	GO:0008252: nucleotidase activity	3.04E-04
18	GO:0090422: thiamine pyrophosphate transporter activity	3.04E-04
19	GO:0042834: peptidoglycan binding	3.04E-04
20	GO:0008568: microtubule-severing ATPase activity	3.04E-04
21	GO:0016762: xyloglucan:xyloglucosyl transferase activity	3.99E-04
22	GO:0005524: ATP binding	4.48E-04
23	GO:0016413: O-acetyltransferase activity	5.97E-04
24	GO:0015180: L-alanine transmembrane transporter activity	6.66E-04
25	GO:0003839: gamma-glutamylcyclotransferase activity	6.66E-04
26	GO:0003938: IMP dehydrogenase activity	6.66E-04
27	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	6.66E-04
28	GO:0015929: hexosaminidase activity	6.66E-04
29	GO:0004563: beta-N-acetylhexosaminidase activity	6.66E-04
30	GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	6.66E-04
31	GO:0000822: inositol hexakisphosphate binding	6.66E-04
32	GO:0016798: hydrolase activity, acting on glycosyl bonds	7.89E-04
33	GO:0005262: calcium channel activity	9.40E-04
34	GO:0004565: beta-galactosidase activity	9.40E-04
35	GO:0015193: L-proline transmembrane transporter activity	1.08E-03
36	GO:0004816: asparagine-tRNA ligase activity	1.08E-03
37	GO:0004075: biotin carboxylase activity	1.08E-03
38	GO:0030267: glyoxylate reductase (NADP) activity	1.08E-03
39	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	1.08E-03
40	GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity	1.08E-03
41	GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity	1.08E-03
42	GO:0016301: kinase activity	1.24E-03
43	GO:0005528: FK506 binding	1.45E-03
44	GO:0001872: (1->3)-beta-D-glucan binding	1.55E-03
45	GO:0015186: L-glutamine transmembrane transporter activity	1.55E-03
46	GO:0003878: ATP citrate synthase activity	1.55E-03
47	GO:0015175: neutral amino acid transmembrane transporter activity	1.55E-03
48	GO:0004445: inositol-polyphosphate 5-phosphatase activity	1.55E-03
49	GO:0016149: translation release factor activity, codon specific	1.55E-03
50	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.02E-03
51	GO:0016836: hydro-lyase activity	2.07E-03
52	GO:0005313: L-glutamate transmembrane transporter activity	2.07E-03
53	GO:0052793: pectin acetylesterase activity	2.07E-03
54	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	2.07E-03
55	GO:0008526: phosphatidylinositol transporter activity	2.07E-03
56	GO:0003989: acetyl-CoA carboxylase activity	2.65E-03
57	GO:0008725: DNA-3-methyladenine glycosylase activity	2.65E-03
58	GO:0008381: mechanically-gated ion channel activity	2.65E-03
59	GO:0017137: Rab GTPase binding	2.65E-03
60	GO:0004040: amidase activity	2.65E-03
61	GO:0016788: hydrolase activity, acting on ester bonds	3.01E-03
62	GO:0005516: calmodulin binding	3.01E-03
63	GO:0005355: glucose transmembrane transporter activity	3.09E-03
64	GO:1990714: hydroxyproline O-galactosyltransferase activity	3.27E-03
65	GO:0035673: oligopeptide transmembrane transporter activity	3.27E-03
66	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	3.27E-03
67	GO:0042578: phosphoric ester hydrolase activity	3.27E-03
68	GO:0019901: protein kinase binding	3.31E-03
69	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	3.93E-03
70	GO:0005242: inward rectifier potassium channel activity	3.93E-03
71	GO:0015631: tubulin binding	3.93E-03
72	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	3.93E-03
73	GO:0005261: cation channel activity	3.93E-03
74	GO:0004427: inorganic diphosphatase activity	4.64E-03
75	GO:0052689: carboxylic ester hydrolase activity	4.72E-03
76	GO:0015250: water channel activity	5.13E-03
77	GO:0004033: aldo-keto reductase (NADP) activity	5.39E-03
78	GO:0016829: lyase activity	5.58E-03
79	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	7.01E-03
80	GO:0003747: translation release factor activity	7.01E-03
81	GO:0005096: GTPase activator activity	7.03E-03
82	GO:0047617: acyl-CoA hydrolase activity	7.87E-03
83	GO:0005384: manganese ion transmembrane transporter activity	7.87E-03
84	GO:0003993: acid phosphatase activity	8.87E-03
85	GO:0047372: acylglycerol lipase activity	9.71E-03
86	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.03E-02
87	GO:0015198: oligopeptide transporter activity	1.07E-02
88	GO:0008378: galactosyltransferase activity	1.07E-02
89	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	1.07E-02
90	GO:0004672: protein kinase activity	1.14E-02
91	GO:0015095: magnesium ion transmembrane transporter activity	1.17E-02
92	GO:0010329: auxin efflux transmembrane transporter activity	1.17E-02
93	GO:0015293: symporter activity	1.23E-02
94	GO:0004190: aspartic-type endopeptidase activity	1.38E-02
95	GO:0030552: cAMP binding	1.38E-02
96	GO:0030553: cGMP binding	1.38E-02
97	GO:0005216: ion channel activity	1.72E-02
98	GO:0033612: receptor serine/threonine kinase binding	1.84E-02
99	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.84E-02
100	GO:0004707: MAP kinase activity	1.84E-02
101	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.96E-02
102	GO:0030570: pectate lyase activity	2.09E-02
103	GO:0004871: signal transducer activity	2.32E-02
104	GO:0004812: aminoacyl-tRNA ligase activity	2.35E-02
105	GO:0030551: cyclic nucleotide binding	2.48E-02
106	GO:0016758: transferase activity, transferring hexosyl groups	2.58E-02
107	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.64E-02
108	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.72E-02
109	GO:0003924: GTPase activity	2.85E-02
110	GO:0015144: carbohydrate transmembrane transporter activity	3.17E-02
111	GO:0051015: actin filament binding	3.33E-02
112	GO:0005351: sugar:proton symporter activity	3.57E-02
113	GO:0005200: structural constituent of cytoskeleton	3.64E-02
114	GO:0008017: microtubule binding	3.82E-02
115	GO:0030247: polysaccharide binding	4.44E-02
116	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	4.77E-02

Rank	GO Term	Adjusted P value
1	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
2	GO:0005886: plasma membrane	1.62E-15
3	GO:0009505: plant-type cell wall	6.21E-05
4	GO:0016021: integral component of membrane	2.80E-04
5	GO:0009543: chloroplast thylakoid lumen	9.24E-04
6	GO:0009897: external side of plasma membrane	1.08E-03
7	GO:0031977: thylakoid lumen	1.49E-03
8	GO:0015630: microtubule cytoskeleton	1.55E-03
9	GO:0032432: actin filament bundle	1.55E-03
10	GO:0009346: citrate lyase complex	1.55E-03
11	GO:0048046: apoplast	1.61E-03
12	GO:0009534: chloroplast thylakoid	1.95E-03
13	GO:0005887: integral component of plasma membrane	3.08E-03
14	GO:0031969: chloroplast membrane	4.06E-03
15	GO:0000151: ubiquitin ligase complex	6.69E-03
16	GO:0005884: actin filament	9.71E-03
17	GO:0031225: anchored component of membrane	1.07E-02
18	GO:0046658: anchored component of plasma membrane	1.09E-02
19	GO:0030659: cytoplasmic vesicle membrane	1.27E-02
20	GO:0030095: chloroplast photosystem II	1.27E-02
21	GO:0005618: cell wall	1.32E-02
22	GO:0016020: membrane	1.33E-02
23	GO:0005768: endosome	1.40E-02
24	GO:0005576: extracellular region	1.46E-02
25	GO:0043234: protein complex	1.49E-02
26	GO:0005874: microtubule	1.67E-02
27	GO:0009654: photosystem II oxygen evolving complex	1.72E-02
28	GO:0009570: chloroplast stroma	1.83E-02
29	GO:0009506: plasmodesma	2.42E-02
30	GO:0005773: vacuole	2.54E-02
31	GO:0009535: chloroplast thylakoid membrane	2.55E-02
32	GO:0005794: Golgi apparatus	2.79E-02
33	GO:0000139: Golgi membrane	2.80E-02
34	GO:0019898: extrinsic component of membrane	2.90E-02
35	GO:0005802: trans-Golgi network	3.50E-02
36	GO:0019005: SCF ubiquitin ligase complex	4.77E-02