co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G00430

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0051493: regulation of cytoskeleton organization	0.00E+00
2	GO:1900000: regulation of anthocyanin catabolic process	0.00E+00
3	GO:2000042: negative regulation of double-strand break repair via homologous recombination	0.00E+00
4	GO:0099131: ATP hydrolysis coupled ion transmembrane transport	0.00E+00
5	GO:0008064: regulation of actin polymerization or depolymerization	0.00E+00
6	GO:0009826: unidimensional cell growth	8.32E-07
7	GO:0010444: guard mother cell differentiation	3.66E-05
8	GO:0009690: cytokinin metabolic process	4.79E-05
9	GO:1903409: reactive oxygen species biosynthetic process	8.96E-05
10	GO:0070509: calcium ion import	8.96E-05
11	GO:0007263: nitric oxide mediated signal transduction	8.96E-05
12	GO:0010442: guard cell morphogenesis	8.96E-05
13	GO:0006723: cuticle hydrocarbon biosynthetic process	8.96E-05
14	GO:0043007: maintenance of rDNA	8.96E-05
15	GO:0052541: plant-type cell wall cellulose metabolic process	2.12E-04
16	GO:0006695: cholesterol biosynthetic process	2.12E-04
17	GO:0010115: regulation of abscisic acid biosynthetic process	2.12E-04
18	GO:0045717: negative regulation of fatty acid biosynthetic process	2.12E-04
19	GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement	3.54E-04
20	GO:0043447: alkane biosynthetic process	3.54E-04
21	GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	3.54E-04
22	GO:0009742: brassinosteroid mediated signaling pathway	4.76E-04
23	GO:0046739: transport of virus in multicellular host	5.10E-04
24	GO:0055070: copper ion homeostasis	5.10E-04
25	GO:0009741: response to brassinosteroid	5.51E-04
26	GO:0016132: brassinosteroid biosynthetic process	6.76E-04
27	GO:0000919: cell plate assembly	6.78E-04
28	GO:0010583: response to cyclopentenone	7.20E-04
29	GO:0045038: protein import into chloroplast thylakoid membrane	8.59E-04
30	GO:0035434: copper ion transmembrane transport	8.59E-04
31	GO:0016126: sterol biosynthetic process	9.61E-04
32	GO:0007166: cell surface receptor signaling pathway	1.03E-03
33	GO:0018258: protein O-linked glycosylation via hydroxyproline	1.05E-03
34	GO:0006796: phosphate-containing compound metabolic process	1.05E-03
35	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	1.05E-03
36	GO:0006561: proline biosynthetic process	1.05E-03
37	GO:0010405: arabinogalactan protein metabolic process	1.05E-03
38	GO:0006751: glutathione catabolic process	1.05E-03
39	GO:0030244: cellulose biosynthetic process	1.24E-03
40	GO:0042372: phylloquinone biosynthetic process	1.25E-03
41	GO:0006694: steroid biosynthetic process	1.25E-03
42	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	1.46E-03
43	GO:0071669: plant-type cell wall organization or biogenesis	1.46E-03
44	GO:0051510: regulation of unidimensional cell growth	1.46E-03
45	GO:0010928: regulation of auxin mediated signaling pathway	1.69E-03
46	GO:0008610: lipid biosynthetic process	1.69E-03
47	GO:0010497: plasmodesmata-mediated intercellular transport	1.93E-03
48	GO:0009808: lignin metabolic process	1.93E-03
49	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.06E-03
50	GO:0042546: cell wall biogenesis	2.07E-03
51	GO:0045337: farnesyl diphosphate biosynthetic process	2.18E-03
52	GO:0033384: geranyl diphosphate biosynthetic process	2.18E-03
53	GO:0031146: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	2.43E-03
54	GO:0009664: plant-type cell wall organization	2.49E-03
55	GO:0006949: syncytium formation	2.70E-03
56	GO:0009688: abscisic acid biosynthetic process	2.70E-03
57	GO:0009750: response to fructose	2.98E-03
58	GO:0018119: peptidyl-cysteine S-nitrosylation	2.98E-03
59	GO:0006096: glycolytic process	3.15E-03
60	GO:0048316: seed development	3.25E-03
61	GO:0012501: programmed cell death	3.26E-03
62	GO:0009767: photosynthetic electron transport chain	3.56E-03
63	GO:0030036: actin cytoskeleton organization	3.56E-03
64	GO:0050826: response to freezing	3.56E-03
65	GO:0009414: response to water deprivation	3.60E-03
66	GO:0010025: wax biosynthetic process	4.50E-03
67	GO:0006071: glycerol metabolic process	4.50E-03
68	GO:0010026: trichome differentiation	5.17E-03
69	GO:0007017: microtubule-based process	5.17E-03
70	GO:0035428: hexose transmembrane transport	5.87E-03
71	GO:0006633: fatty acid biosynthetic process	5.94E-03
72	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	6.23E-03
73	GO:0042127: regulation of cell proliferation	6.61E-03
74	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	6.99E-03
75	GO:0042631: cellular response to water deprivation	7.37E-03
76	GO:0042335: cuticle development	7.37E-03
77	GO:0042391: regulation of membrane potential	7.37E-03
78	GO:0000271: polysaccharide biosynthetic process	7.37E-03
79	GO:0008360: regulation of cell shape	7.77E-03
80	GO:0009958: positive gravitropism	7.77E-03
81	GO:0010182: sugar mediated signaling pathway	7.77E-03
82	GO:0046323: glucose import	7.77E-03
83	GO:0009791: post-embryonic development	8.58E-03
84	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	8.99E-03
85	GO:0071554: cell wall organization or biogenesis	8.99E-03
86	GO:0007264: small GTPase mediated signal transduction	9.42E-03
87	GO:0048235: pollen sperm cell differentiation	9.42E-03
88	GO:0032502: developmental process	9.42E-03
89	GO:0006468: protein phosphorylation	9.84E-03
90	GO:0030163: protein catabolic process	9.85E-03
91	GO:0009828: plant-type cell wall loosening	1.03E-02
92	GO:0006970: response to osmotic stress	1.09E-02
93	GO:0051607: defense response to virus	1.12E-02
94	GO:0010411: xyloglucan metabolic process	1.31E-02
95	GO:0046777: protein autophosphorylation	1.34E-02
96	GO:0016311: dephosphorylation	1.36E-02
97	GO:0000160: phosphorelay signal transduction system	1.46E-02
98	GO:0009832: plant-type cell wall biogenesis	1.46E-02
99	GO:0045454: cell redox homeostasis	1.50E-02
100	GO:0009834: plant-type secondary cell wall biogenesis	1.51E-02
101	GO:0071555: cell wall organization	1.63E-02
102	GO:0030001: metal ion transport	1.82E-02
103	GO:0006629: lipid metabolic process	1.86E-02
104	GO:0009640: photomorphogenesis	1.99E-02
105	GO:0006813: potassium ion transport	2.46E-02
106	GO:0009736: cytokinin-activated signaling pathway	2.46E-02
107	GO:0051603: proteolysis involved in cellular protein catabolic process	2.52E-02
108	GO:0048367: shoot system development	2.84E-02
109	GO:0009626: plant-type hypersensitive response	2.90E-02
110	GO:0009740: gibberellic acid mediated signaling pathway	3.03E-02
111	GO:0042545: cell wall modification	3.10E-02
112	GO:0051726: regulation of cell cycle	3.30E-02
113	GO:0040008: regulation of growth	4.51E-02
114	GO:0045490: pectin catabolic process	4.67E-02
115	GO:0016310: phosphorylation	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0005048: signal sequence binding	0.00E+00
2	GO:0050614: delta24-sterol reductase activity	0.00E+00
3	GO:0005222: intracellular cAMP activated cation channel activity	0.00E+00
4	GO:0010301: xanthoxin dehydrogenase activity	0.00E+00
5	GO:0008756: o-succinylbenzoate-CoA ligase activity	0.00E+00
6	GO:0047807: cytokinin 7-beta-glucosyltransferase activity	8.96E-05
7	GO:0001530: lipopolysaccharide binding	8.96E-05
8	GO:0080062: cytokinin 9-beta-glucosyltransferase activity	8.96E-05
9	GO:0005221: intracellular cyclic nucleotide activated cation channel activity	8.96E-05
10	GO:0000248: C-5 sterol desaturase activity	8.96E-05
11	GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	2.12E-04
12	GO:0003839: gamma-glutamylcyclotransferase activity	2.12E-04
13	GO:0016531: copper chaperone activity	3.54E-04
14	GO:0019829: cation-transporting ATPase activity	3.54E-04
15	GO:0001872: (1->3)-beta-D-glucan binding	5.10E-04
16	GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity	5.10E-04
17	GO:0016836: hydro-lyase activity	6.78E-04
18	GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity	6.78E-04
19	GO:0004506: squalene monooxygenase activity	6.78E-04
20	GO:0046527: glucosyltransferase activity	6.78E-04
21	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	8.04E-04
22	GO:0005200: structural constituent of cytoskeleton	8.61E-04
23	GO:1990714: hydroxyproline O-galactosyltransferase activity	1.05E-03
24	GO:0016208: AMP binding	1.05E-03
25	GO:0051920: peroxiredoxin activity	1.25E-03
26	GO:0005261: cation channel activity	1.25E-03
27	GO:0051753: mannan synthase activity	1.25E-03
28	GO:0005242: inward rectifier potassium channel activity	1.25E-03
29	GO:0004427: inorganic diphosphatase activity	1.46E-03
30	GO:0016209: antioxidant activity	1.69E-03
31	GO:0008312: 7S RNA binding	1.69E-03
32	GO:0005375: copper ion transmembrane transporter activity	1.93E-03
33	GO:0004337: geranyltranstransferase activity	2.18E-03
34	GO:0008889: glycerophosphodiester phosphodiesterase activity	2.18E-03
35	GO:0005516: calmodulin binding	2.38E-03
36	GO:0004161: dimethylallyltranstransferase activity	2.98E-03
37	GO:0005089: Rho guanyl-nucleotide exchange factor activity	2.98E-03
38	GO:0005262: calcium channel activity	3.56E-03
39	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	3.56E-03
40	GO:0004022: alcohol dehydrogenase (NAD) activity	3.56E-03
41	GO:0030552: cAMP binding	4.18E-03
42	GO:0030553: cGMP binding	4.18E-03
43	GO:0004190: aspartic-type endopeptidase activity	4.18E-03
44	GO:0005528: FK506 binding	4.83E-03
45	GO:0005216: ion channel activity	5.17E-03
46	GO:0008324: cation transmembrane transporter activity	5.17E-03
47	GO:0019706: protein-cysteine S-palmitoyltransferase activity	5.52E-03
48	GO:0046983: protein dimerization activity	5.79E-03
49	GO:0016760: cellulose synthase (UDP-forming) activity	6.23E-03
50	GO:0004672: protein kinase activity	6.68E-03
51	GO:0030551: cyclic nucleotide binding	7.37E-03
52	GO:0005199: structural constituent of cell wall	7.77E-03
53	GO:0005355: glucose transmembrane transporter activity	8.17E-03
54	GO:0016762: xyloglucan:xyloglucosyl transferase activity	8.99E-03
55	GO:0000156: phosphorelay response regulator activity	9.85E-03
56	GO:0016413: O-acetyltransferase activity	1.12E-02
57	GO:0016597: amino acid binding	1.12E-02
58	GO:0050660: flavin adenine dinucleotide binding	1.17E-02
59	GO:0030247: polysaccharide binding	1.31E-02
60	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.31E-02
61	GO:0004674: protein serine/threonine kinase activity	1.32E-02
62	GO:0052689: carboxylic ester hydrolase activity	1.39E-02
63	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	1.51E-02
64	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.56E-02
65	GO:0003993: acid phosphatase activity	1.72E-02
66	GO:0003924: GTPase activity	1.86E-02
67	GO:0004185: serine-type carboxypeptidase activity	1.99E-02
68	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.22E-02
69	GO:0016491: oxidoreductase activity	2.31E-02
70	GO:0045330: aspartyl esterase activity	2.65E-02
71	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	2.84E-02
72	GO:0080044: quercetin 7-O-glucosyltransferase activity	2.96E-02
73	GO:0080043: quercetin 3-O-glucosyltransferase activity	2.96E-02
74	GO:0030599: pectinesterase activity	3.03E-02
75	GO:0003779: actin binding	3.10E-02
76	GO:0016758: transferase activity, transferring hexosyl groups	3.64E-02
77	GO:0015144: carbohydrate transmembrane transporter activity	4.22E-02
78	GO:0016301: kinase activity	4.23E-02
79	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.33E-02
80	GO:0030246: carbohydrate binding	4.42E-02
81	GO:0005351: sugar:proton symporter activity	4.59E-02

Rank	GO Term	Adjusted P value
1	GO:0010240: plastid pyruvate dehydrogenase complex	0.00E+00
2	GO:0070971: endoplasmic reticulum exit site	0.00E+00
3	GO:0005886: plasma membrane	7.39E-05
4	GO:0046658: anchored component of plasma membrane	1.59E-04
5	GO:0080085: signal recognition particle, chloroplast targeting	2.12E-04
6	GO:0016021: integral component of membrane	4.17E-04
7	GO:0009506: plasmodesma	4.28E-04
8	GO:0005576: extracellular region	1.07E-03
9	GO:0009941: chloroplast envelope	1.09E-03
10	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	1.93E-03
11	GO:0045298: tubulin complex	2.18E-03
12	GO:0009570: chloroplast stroma	2.26E-03
13	GO:0031225: anchored component of membrane	2.51E-03
14	GO:0005618: cell wall	2.66E-03
15	GO:0030659: cytoplasmic vesicle membrane	3.86E-03
16	GO:0009505: plant-type cell wall	5.25E-03
17	GO:0005615: extracellular space	7.30E-03
18	GO:0019898: extrinsic component of membrane	8.58E-03
19	GO:0005778: peroxisomal membrane	1.07E-02
20	GO:0031969: chloroplast membrane	1.25E-02
21	GO:0031977: thylakoid lumen	1.88E-02
22	GO:0005794: Golgi apparatus	1.94E-02
23	GO:0005856: cytoskeleton	2.16E-02
24	GO:0000139: Golgi membrane	2.39E-02
25	GO:0005789: endoplasmic reticulum membrane	2.78E-02
26	GO:0009543: chloroplast thylakoid lumen	3.71E-02
27	GO:0009579: thylakoid	3.93E-02
28	GO:0009534: chloroplast thylakoid	3.97E-02
29	GO:0005773: vacuole	4.51E-02