co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G00150

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006429: leucyl-tRNA aminoacylation	0.00E+00
2	GO:0002184: cytoplasmic translational termination	0.00E+00
3	GO:0090706: specification of plant organ position	0.00E+00
4	GO:0006780: uroporphyrinogen III biosynthetic process	0.00E+00
5	GO:0000372: Group I intron splicing	0.00E+00
6	GO:0000373: Group II intron splicing	1.42E-05
7	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.25E-05
8	GO:1902183: regulation of shoot apical meristem development	8.61E-05
9	GO:0010158: abaxial cell fate specification	8.61E-05
10	GO:0008610: lipid biosynthetic process	2.83E-04
11	GO:2000021: regulation of ion homeostasis	2.87E-04
12	GO:0034337: RNA folding	2.87E-04
13	GO:0010450: inflorescence meristem growth	2.87E-04
14	GO:0070509: calcium ion import	2.87E-04
15	GO:0007263: nitric oxide mediated signal transduction	2.87E-04
16	GO:0043266: regulation of potassium ion transport	2.87E-04
17	GO:0010480: microsporocyte differentiation	2.87E-04
18	GO:0031338: regulation of vesicle fusion	2.87E-04
19	GO:0006723: cuticle hydrocarbon biosynthetic process	2.87E-04
20	GO:0000481: maturation of 5S rRNA	2.87E-04
21	GO:0042547: cell wall modification involved in multidimensional cell growth	2.87E-04
22	GO:0032544: plastid translation	3.49E-04
23	GO:0071554: cell wall organization or biogenesis	3.57E-04
24	GO:2000024: regulation of leaf development	4.20E-04
25	GO:0010270: photosystem II oxygen evolving complex assembly	6.30E-04
26	GO:0010275: NAD(P)H dehydrogenase complex assembly	6.30E-04
27	GO:0010115: regulation of abscisic acid biosynthetic process	6.30E-04
28	GO:0045717: negative regulation of fatty acid biosynthetic process	6.30E-04
29	GO:0015995: chlorophyll biosynthetic process	7.09E-04
30	GO:0090630: activation of GTPase activity	1.02E-03
31	GO:0045165: cell fate commitment	1.02E-03
32	GO:0043447: alkane biosynthetic process	1.02E-03
33	GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	1.02E-03
34	GO:0043617: cellular response to sucrose starvation	1.02E-03
35	GO:0009944: polarity specification of adaxial/abaxial axis	1.34E-03
36	GO:0016556: mRNA modification	1.46E-03
37	GO:0006468: protein phosphorylation	1.77E-03
38	GO:0042335: cuticle development	2.45E-03
39	GO:0000304: response to singlet oxygen	2.50E-03
40	GO:0032543: mitochondrial translation	2.50E-03
41	GO:0045038: protein import into chloroplast thylakoid membrane	2.50E-03
42	GO:0010154: fruit development	2.64E-03
43	GO:0006354: DNA-templated transcription, elongation	3.08E-03
44	GO:0010405: arabinogalactan protein metabolic process	3.08E-03
45	GO:0006751: glutathione catabolic process	3.08E-03
46	GO:0006828: manganese ion transport	3.08E-03
47	GO:0018258: protein O-linked glycosylation via hydroxyproline	3.08E-03
48	GO:0009913: epidermal cell differentiation	3.08E-03
49	GO:0006655: phosphatidylglycerol biosynthetic process	3.08E-03
50	GO:0005975: carbohydrate metabolic process	3.45E-03
51	GO:0042026: protein refolding	3.71E-03
52	GO:0006458: 'de novo' protein folding	3.71E-03
53	GO:0009395: phospholipid catabolic process	4.38E-03
54	GO:0048437: floral organ development	4.38E-03
55	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	4.38E-03
56	GO:0006821: chloride transport	4.38E-03
57	GO:0051510: regulation of unidimensional cell growth	4.38E-03
58	GO:0032508: DNA duplex unwinding	5.08E-03
59	GO:0010093: specification of floral organ identity	5.82E-03
60	GO:0009657: plastid organization	5.82E-03
61	GO:0009817: defense response to fungus, incompatible interaction	6.14E-03
62	GO:0018298: protein-chromophore linkage	6.14E-03
63	GO:0006629: lipid metabolic process	6.44E-03
64	GO:0006098: pentose-phosphate shunt	6.60E-03
65	GO:0009821: alkaloid biosynthetic process	6.60E-03
66	GO:0010206: photosystem II repair	6.60E-03
67	GO:0009753: response to jasmonic acid	7.16E-03
68	GO:0006779: porphyrin-containing compound biosynthetic process	7.41E-03
69	GO:0009739: response to gibberellin	7.87E-03
70	GO:0006782: protoporphyrinogen IX biosynthetic process	8.26E-03
71	GO:0055062: phosphate ion homeostasis	8.26E-03
72	GO:0018119: peptidyl-cysteine S-nitrosylation	9.14E-03
73	GO:0048229: gametophyte development	9.14E-03
74	GO:0000038: very long-chain fatty acid metabolic process	9.14E-03
75	GO:0006816: calcium ion transport	9.14E-03
76	GO:0009773: photosynthetic electron transport in photosystem I	9.14E-03
77	GO:0006415: translational termination	9.14E-03
78	GO:0012501: programmed cell death	1.01E-02
79	GO:0016024: CDP-diacylglycerol biosynthetic process	1.01E-02
80	GO:0009718: anthocyanin-containing compound biosynthetic process	1.10E-02
81	GO:0010075: regulation of meristem growth	1.10E-02
82	GO:0006094: gluconeogenesis	1.10E-02
83	GO:0009767: photosynthetic electron transport chain	1.10E-02
84	GO:0030048: actin filament-based movement	1.10E-02
85	GO:0009934: regulation of meristem structural organization	1.20E-02
86	GO:0010143: cutin biosynthetic process	1.20E-02
87	GO:0009933: meristem structural organization	1.20E-02
88	GO:0010207: photosystem II assembly	1.20E-02
89	GO:0090351: seedling development	1.30E-02
90	GO:0010030: positive regulation of seed germination	1.30E-02
91	GO:0071732: cellular response to nitric oxide	1.30E-02
92	GO:0010025: wax biosynthetic process	1.40E-02
93	GO:0009416: response to light stimulus	1.53E-02
94	GO:0006096: glycolytic process	1.61E-02
95	GO:0006418: tRNA aminoacylation for protein translation	1.62E-02
96	GO:0061077: chaperone-mediated protein folding	1.73E-02
97	GO:0031408: oxylipin biosynthetic process	1.73E-02
98	GO:0080092: regulation of pollen tube growth	1.85E-02
99	GO:0006730: one-carbon metabolic process	1.85E-02
100	GO:0009814: defense response, incompatible interaction	1.85E-02
101	GO:0071369: cellular response to ethylene stimulus	1.96E-02
102	GO:0009306: protein secretion	2.08E-02
103	GO:0016117: carotenoid biosynthetic process	2.21E-02
104	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	2.21E-02
105	GO:0009793: embryo development ending in seed dormancy	2.30E-02
106	GO:0048653: anther development	2.33E-02
107	GO:0042631: cellular response to water deprivation	2.33E-02
108	GO:0042391: regulation of membrane potential	2.33E-02
109	GO:0009741: response to brassinosteroid	2.46E-02
110	GO:0006814: sodium ion transport	2.59E-02
111	GO:0009646: response to absence of light	2.59E-02
112	GO:0009791: post-embryonic development	2.72E-02
113	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	2.86E-02
114	GO:0007264: small GTPase mediated signal transduction	3.00E-02
115	GO:0016032: viral process	3.00E-02
116	GO:0048235: pollen sperm cell differentiation	3.00E-02
117	GO:0006633: fatty acid biosynthetic process	3.05E-02
118	GO:0030163: protein catabolic process	3.13E-02
119	GO:0071281: cellular response to iron ion	3.13E-02
120	GO:0045490: pectin catabolic process	3.35E-02
121	GO:0001666: response to hypoxia	3.72E-02
122	GO:0010027: thylakoid membrane organization	3.72E-02
123	GO:0042128: nitrate assimilation	4.02E-02
124	GO:0030244: cellulose biosynthetic process	4.49E-02
125	GO:0006811: ion transport	4.81E-02
126	GO:0009826: unidimensional cell growth	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0004852: uroporphyrinogen-III synthase activity	0.00E+00
2	GO:1990534: thermospermine oxidase activity	0.00E+00
3	GO:0005048: signal sequence binding	0.00E+00
4	GO:0005222: intracellular cAMP activated cation channel activity	0.00E+00
5	GO:0047513: 1,2-alpha-L-fucosidase activity	0.00E+00
6	GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity	0.00E+00
7	GO:0004823: leucine-tRNA ligase activity	0.00E+00
8	GO:0005221: intracellular cyclic nucleotide activated cation channel activity	2.87E-04
9	GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity	2.87E-04
10	GO:0005227: calcium activated cation channel activity	2.87E-04
11	GO:0004856: xylulokinase activity	2.87E-04
12	GO:0004674: protein serine/threonine kinase activity	4.27E-04
13	GO:0016413: O-acetyltransferase activity	5.36E-04
14	GO:0016788: hydrolase activity, acting on ester bonds	5.53E-04
15	GO:0003839: gamma-glutamylcyclotransferase activity	6.30E-04
16	GO:0004326: tetrahydrofolylpolyglutamate synthase activity	6.30E-04
17	GO:0015929: hexosaminidase activity	6.30E-04
18	GO:0004563: beta-N-acetylhexosaminidase activity	6.30E-04
19	GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	6.30E-04
20	GO:0030267: glyoxylate reductase (NADP) activity	1.02E-03
21	GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity	1.02E-03
22	GO:0003863: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity	1.02E-03
23	GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity	1.02E-03
24	GO:0003913: DNA photolyase activity	1.02E-03
25	GO:0002161: aminoacyl-tRNA editing activity	1.02E-03
26	GO:0005528: FK506 binding	1.34E-03
27	GO:0043023: ribosomal large subunit binding	1.46E-03
28	GO:0008508: bile acid:sodium symporter activity	1.46E-03
29	GO:0001872: (1->3)-beta-D-glucan binding	1.46E-03
30	GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity	1.46E-03
31	GO:0016149: translation release factor activity, codon specific	1.46E-03
32	GO:0016836: hydro-lyase activity	1.96E-03
33	GO:0008526: phosphatidylinositol transporter activity	1.96E-03
34	GO:0016773: phosphotransferase activity, alcohol group as acceptor	2.50E-03
35	GO:0017137: Rab GTPase binding	2.50E-03
36	GO:0005247: voltage-gated chloride channel activity	3.08E-03
37	GO:1990714: hydroxyproline O-galactosyltransferase activity	3.08E-03
38	GO:0004332: fructose-bisphosphate aldolase activity	3.08E-03
39	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	3.08E-03
40	GO:0042578: phosphoric ester hydrolase activity	3.08E-03
41	GO:0005242: inward rectifier potassium channel activity	3.71E-03
42	GO:0051920: peroxiredoxin activity	3.71E-03
43	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	3.71E-03
44	GO:0015631: tubulin binding	3.71E-03
45	GO:0005261: cation channel activity	3.71E-03
46	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	3.71E-03
47	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	3.71E-03
48	GO:0009881: photoreceptor activity	4.38E-03
49	GO:0019843: rRNA binding	4.52E-03
50	GO:0016209: antioxidant activity	5.08E-03
51	GO:0008312: 7S RNA binding	5.08E-03
52	GO:0004033: aldo-keto reductase (NADP) activity	5.08E-03
53	GO:0003747: translation release factor activity	6.60E-03
54	GO:0047617: acyl-CoA hydrolase activity	7.41E-03
55	GO:0016844: strictosidine synthase activity	7.41E-03
56	GO:0005384: manganese ion transmembrane transporter activity	7.41E-03
57	GO:0044183: protein binding involved in protein folding	9.14E-03
58	GO:0005089: Rho guanyl-nucleotide exchange factor activity	9.14E-03
59	GO:0015095: magnesium ion transmembrane transporter activity	1.10E-02
60	GO:0005262: calcium channel activity	1.10E-02
61	GO:0004565: beta-galactosidase activity	1.10E-02
62	GO:0008081: phosphoric diester hydrolase activity	1.10E-02
63	GO:0004022: alcohol dehydrogenase (NAD) activity	1.10E-02
64	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.17E-02
65	GO:0003774: motor activity	1.20E-02
66	GO:0008131: primary amine oxidase activity	1.20E-02
67	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.20E-02
68	GO:0004190: aspartic-type endopeptidase activity	1.30E-02
69	GO:0030552: cAMP binding	1.30E-02
70	GO:0030553: cGMP binding	1.30E-02
71	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.40E-02
72	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.40E-02
73	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.40E-02
74	GO:0005216: ion channel activity	1.62E-02
75	GO:0003824: catalytic activity	1.70E-02
76	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.73E-02
77	GO:0004176: ATP-dependent peptidase activity	1.73E-02
78	GO:0033612: receptor serine/threonine kinase binding	1.73E-02
79	GO:0016301: kinase activity	1.81E-02
80	GO:0022891: substrate-specific transmembrane transporter activity	1.96E-02
81	GO:0030570: pectate lyase activity	1.96E-02
82	GO:0004812: aminoacyl-tRNA ligase activity	2.21E-02
83	GO:0030551: cyclic nucleotide binding	2.33E-02
84	GO:0030246: carbohydrate binding	2.39E-02
85	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.49E-02
86	GO:0016829: lyase activity	2.63E-02
87	GO:0004672: protein kinase activity	2.78E-02
88	GO:0005516: calmodulin binding	2.82E-02
89	GO:0005524: ATP binding	3.00E-02
90	GO:0004518: nuclease activity	3.00E-02
91	GO:0008237: metallopeptidase activity	3.42E-02
92	GO:0016168: chlorophyll binding	3.86E-02
93	GO:0030247: polysaccharide binding	4.17E-02
94	GO:0008236: serine-type peptidase activity	4.33E-02
95	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	4.49E-02
96	GO:0005096: GTPase activator activity	4.65E-02
97	GO:0015238: drug transmembrane transporter activity	4.65E-02
98	GO:0005215: transporter activity	5.00E-02

Rank	GO Term	Adjusted P value
1	GO:0009571: proplastid stroma	0.00E+00
2	GO:0009507: chloroplast	2.75E-12
3	GO:0009570: chloroplast stroma	4.24E-10
4	GO:0009535: chloroplast thylakoid membrane	1.98E-05
5	GO:0005886: plasma membrane	5.93E-05
6	GO:0009543: chloroplast thylakoid lumen	1.24E-04
7	GO:0009344: nitrite reductase complex [NAD(P)H]	2.87E-04
8	GO:0000428: DNA-directed RNA polymerase complex	2.87E-04
9	GO:0009941: chloroplast envelope	3.66E-04
10	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	4.20E-04
11	GO:0009534: chloroplast thylakoid	4.42E-04
12	GO:0080085: signal recognition particle, chloroplast targeting	6.30E-04
13	GO:0031977: thylakoid lumen	1.34E-03
14	GO:0046658: anchored component of plasma membrane	2.02E-03
15	GO:0009505: plant-type cell wall	2.27E-03
16	GO:0034707: chloride channel complex	3.08E-03
17	GO:0016021: integral component of membrane	4.01E-03
18	GO:0009295: nucleoid	4.19E-03
19	GO:0030529: intracellular ribonucleoprotein complex	4.70E-03
20	GO:0009579: thylakoid	5.80E-03
21	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	5.82E-03
22	GO:0016459: myosin complex	8.26E-03
23	GO:0016324: apical plasma membrane	8.26E-03
24	GO:0000311: plastid large ribosomal subunit	1.01E-02
25	GO:0032040: small-subunit processome	1.01E-02
26	GO:0009508: plastid chromosome	1.10E-02
27	GO:0030659: cytoplasmic vesicle membrane	1.20E-02
28	GO:0030095: chloroplast photosystem II	1.20E-02
29	GO:0043234: protein complex	1.40E-02
30	GO:0031969: chloroplast membrane	1.56E-02
31	GO:0009654: photosystem II oxygen evolving complex	1.62E-02
32	GO:0009532: plastid stroma	1.73E-02
33	GO:0009536: plastid	2.05E-02
34	GO:0009523: photosystem II	2.72E-02
35	GO:0019898: extrinsic component of membrane	2.72E-02
36	GO:0031225: anchored component of membrane	2.97E-02
37	GO:0005759: mitochondrial matrix	3.05E-02
38	GO:0015934: large ribosomal subunit	4.97E-02