GO Enrichment Analysis of Co-expressed Genes with
AT3G63410
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0018023: peptidyl-lysine trimethylation | 0.00E+00 |
| 2 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 3 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 2.31E-08 |
| 4 | GO:0043489: RNA stabilization | 1.67E-05 |
| 5 | GO:0071461: cellular response to redox state | 1.67E-05 |
| 6 | GO:0010020: chloroplast fission | 1.68E-05 |
| 7 | GO:0019253: reductive pentose-phosphate cycle | 1.68E-05 |
| 8 | GO:0080005: photosystem stoichiometry adjustment | 4.35E-05 |
| 9 | GO:0018026: peptidyl-lysine monomethylation | 4.35E-05 |
| 10 | GO:0009658: chloroplast organization | 8.78E-05 |
| 11 | GO:0043572: plastid fission | 1.17E-04 |
| 12 | GO:2001141: regulation of RNA biosynthetic process | 1.17E-04 |
| 13 | GO:0042026: protein refolding | 3.11E-04 |
| 14 | GO:0006458: 'de novo' protein folding | 3.11E-04 |
| 15 | GO:0010196: nonphotochemical quenching | 3.66E-04 |
| 16 | GO:0006096: glycolytic process | 3.97E-04 |
| 17 | GO:0071482: cellular response to light stimulus | 4.82E-04 |
| 18 | GO:0010205: photoinhibition | 6.04E-04 |
| 19 | GO:0009773: photosynthetic electron transport in photosystem I | 7.34E-04 |
| 20 | GO:0019684: photosynthesis, light reaction | 7.34E-04 |
| 21 | GO:0009089: lysine biosynthetic process via diaminopimelate | 7.34E-04 |
| 22 | GO:0006352: DNA-templated transcription, initiation | 7.34E-04 |
| 23 | GO:0018119: peptidyl-cysteine S-nitrosylation | 7.34E-04 |
| 24 | GO:0009767: photosynthetic electron transport chain | 8.70E-04 |
| 25 | GO:0006006: glucose metabolic process | 8.70E-04 |
| 26 | GO:0010207: photosystem II assembly | 9.39E-04 |
| 27 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.08E-03 |
| 28 | GO:0061077: chaperone-mediated protein folding | 1.31E-03 |
| 29 | GO:0009409: response to cold | 1.54E-03 |
| 30 | GO:0000413: protein peptidyl-prolyl isomerization | 1.73E-03 |
| 31 | GO:0009791: post-embryonic development | 2.00E-03 |
| 32 | GO:0009631: cold acclimation | 3.53E-03 |
| 33 | GO:0007568: aging | 3.53E-03 |
| 34 | GO:0045087: innate immune response | 3.76E-03 |
| 35 | GO:0009744: response to sucrose | 4.47E-03 |
| 36 | GO:0006457: protein folding | 4.95E-03 |
| 37 | GO:0006364: rRNA processing | 5.48E-03 |
| 38 | GO:0055114: oxidation-reduction process | 6.79E-03 |
| 39 | GO:0006396: RNA processing | 7.13E-03 |
| 40 | GO:0009845: seed germination | 8.63E-03 |
| 41 | GO:0006633: fatty acid biosynthetic process | 9.58E-03 |
| 42 | GO:0009451: RNA modification | 1.04E-02 |
| 43 | GO:0006810: transport | 1.14E-02 |
| 44 | GO:0046686: response to cadmium ion | 1.21E-02 |
| 45 | GO:0042254: ribosome biogenesis | 1.41E-02 |
| 46 | GO:0080167: response to karrikin | 1.62E-02 |
| 47 | GO:0009793: embryo development ending in seed dormancy | 1.80E-02 |
| 48 | GO:0032259: methylation | 2.07E-02 |
| 49 | GO:0006397: mRNA processing | 2.21E-02 |
| 50 | GO:0009416: response to light stimulus | 3.22E-02 |
| 51 | GO:0006414: translational elongation | 4.28E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045485: omega-6 fatty acid desaturase activity | 1.67E-05 |
| 2 | GO:0009496: plastoquinol--plastocyanin reductase activity | 1.67E-05 |
| 3 | GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity | 1.67E-05 |
| 4 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 1.67E-05 |
| 5 | GO:0008266: poly(U) RNA binding | 1.68E-05 |
| 6 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 4.35E-05 |
| 7 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 4.35E-05 |
| 8 | GO:0004618: phosphoglycerate kinase activity | 4.35E-05 |
| 9 | GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity | 7.77E-05 |
| 10 | GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity | 1.17E-04 |
| 11 | GO:0016987: sigma factor activity | 1.61E-04 |
| 12 | GO:0016279: protein-lysine N-methyltransferase activity | 1.61E-04 |
| 13 | GO:0001053: plastid sigma factor activity | 1.61E-04 |
| 14 | GO:0008135: translation factor activity, RNA binding | 4.82E-04 |
| 15 | GO:0044183: protein binding involved in protein folding | 7.34E-04 |
| 16 | GO:0043424: protein histidine kinase binding | 1.23E-03 |
| 17 | GO:0004176: ATP-dependent peptidase activity | 1.31E-03 |
| 18 | GO:0003924: GTPase activity | 2.18E-03 |
| 19 | GO:0008237: metallopeptidase activity | 2.48E-03 |
| 20 | GO:0004222: metalloendopeptidase activity | 3.42E-03 |
| 21 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 3.53E-03 |
| 22 | GO:0003746: translation elongation factor activity | 3.76E-03 |
| 23 | GO:0050661: NADP binding | 4.11E-03 |
| 24 | GO:0051537: 2 iron, 2 sulfur cluster binding | 4.71E-03 |
| 25 | GO:0005198: structural molecule activity | 4.83E-03 |
| 26 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.96E-03 |
| 27 | GO:0051287: NAD binding | 5.09E-03 |
| 28 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 5.48E-03 |
| 29 | GO:0005525: GTP binding | 6.28E-03 |
| 30 | GO:0051082: unfolded protein binding | 6.99E-03 |
| 31 | GO:0019843: rRNA binding | 8.17E-03 |
| 32 | GO:0016491: oxidoreductase activity | 1.02E-02 |
| 33 | GO:0003743: translation initiation factor activity | 1.14E-02 |
| 34 | GO:0042802: identical protein binding | 1.21E-02 |
| 35 | GO:0008168: methyltransferase activity | 1.36E-02 |
| 36 | GO:0050660: flavin adenine dinucleotide binding | 1.54E-02 |
| 37 | GO:0016787: hydrolase activity | 1.66E-02 |
| 38 | GO:0009055: electron carrier activity | 2.25E-02 |
| 39 | GO:0016887: ATPase activity | 2.92E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 1.29E-23 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 1.47E-13 |
| 3 | GO:0009534: chloroplast thylakoid | 5.45E-13 |
| 4 | GO:0009570: chloroplast stroma | 4.74E-11 |
| 5 | GO:0009941: chloroplast envelope | 2.34E-10 |
| 6 | GO:0009579: thylakoid | 6.45E-08 |
| 7 | GO:0009547: plastid ribosome | 1.67E-05 |
| 8 | GO:0009706: chloroplast inner membrane | 1.91E-05 |
| 9 | GO:0010319: stromule | 9.77E-05 |
| 10 | GO:0009512: cytochrome b6f complex | 2.09E-04 |
| 11 | GO:0009533: chloroplast stromal thylakoid | 3.66E-04 |
| 12 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 5.42E-04 |
| 13 | GO:0009543: chloroplast thylakoid lumen | 5.92E-04 |
| 14 | GO:0000311: plastid large ribosomal subunit | 8.01E-04 |
| 15 | GO:0048046: apoplast | 9.60E-04 |
| 16 | GO:0042651: thylakoid membrane | 1.23E-03 |
| 17 | GO:0009532: plastid stroma | 1.31E-03 |
| 18 | GO:0030529: intracellular ribonucleoprotein complex | 2.68E-03 |
| 19 | GO:0031977: thylakoid lumen | 4.23E-03 |
| 20 | GO:0005874: microtubule | 1.58E-02 |
| 21 | GO:0031969: chloroplast membrane | 1.62E-02 |
| 22 | GO:0016020: membrane | 1.78E-02 |
| 23 | GO:0022626: cytosolic ribosome | 3.12E-02 |